| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1592638 | NA (NA) | 14 (0.110) | 9/156 | NT | NA | noncoding (8/25 nt) | REP123 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP123 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | NC_000913 | = 1592647 | NA (NA) | noncoding (17/25 nt) | REP123 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP123 (repetitive extragenic palindromic) element; contains 1 REP sequences | |||||
CTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1592529‑1592638‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taagccgcatgTCGAGATGGCATGCGGCTTAATATTGCCGACTTCAAACGGCGCATCAACGCCTTATTTAAATCCTCCTTTTTATCCGCGATCGCGGATATCGCAGCGTT < NC_000913/1592647‑1592549 CTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATT > 2:2268180/1‑100CTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATT < 2:3767997/100‑1 TTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTA > 1:1455973/1‑100 TTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTA < 2:419543/100‑1 TCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGC > 2:354345/1‑100 CCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCC > 2:2191487/1‑100 CCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCC > 2:1313480/1‑100 CCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGCCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGC > 2:1621784/1‑99 CGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCG < 2:3226228/100‑1 GCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGC > 2:3750672/1‑100 CTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATG < 2:3681073/100‑1 CTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATG < 1:1493223/100‑1 CGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGGCGTTTGAAGTCGGCAATATTAAGCCGCATGTCGAGATGGCATGCGGC < 1:155417/100‑1 CGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGTCGAGATGGCATGCGGC < 1:3644492/100‑1 CGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGTCGAGATGGCATGCGGC < 1:12078/100‑1 CGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGTCGAGATGGCATGCGGC < 1:1982400/100‑1 CGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGTCGAGATGGCATGCGGC < 2:414673/100‑1 GATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGTCGAGATGGCATGCGGCT < 2:861368/100‑1 ATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGTCGAGATGGCATGCGGCTT < 1:3585988/100‑1 TATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGTCGAGATGGCATGCGGCTTA < 1:2327597/100‑1 CCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGTCGAGATGGCATGCGGCTTAATA > 1:2962326/1‑100 CGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGTCGAGATGGCATGCGGCTTAATAT < 2:3396320/100‑1 GCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGTCGAGATGGCATGCGGCTTAATATT < 2:1449170/100‑1 GCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGTCGAGATGGCATGCGGCTTAATATT < 2:2962345/100‑1 CGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGTCGAGATGGCATGCGGCTTAATATTG < 2:3557293/100‑1 GGAGGATTTAAATAAGGCGTTGATGCGCAGTTTGAAGTCGGCAATATTAAGCCGCATGTCGAGATGGCATGCGGCTTAATATTGCCGACTTCAAACGGCG < 1:555406/100‑1 TAAGCCGCATGTCGAGATGGCATGCGGCTTAATATTGCCGACTTCAAACGGCGCATCAACGCCTTATTTAAATCCTCCTTTTTATCCGCGATCGCGGATA > 2:1604294/1‑100 TAAGCCGCATGTCGAGATGGCATGCGGCTTAATATTGCCGACTTCAAACGGCGCATCAACGCCTTATTTAAATCCTCCTTTTTATCCGCGATCGCGGATA > 1:1312557/1‑100 GCCGCATGTCGAGATGGCATGCGGCTTAATATTGCCGACTTCAAACGGCGCATCAACGCCTTATTTAAATCCTCCTTTTTATCCGCGATCGCGGATATCG > 1:3497176/1‑100 CGCATGTCGAGATGGCATGCGGCTTAATATTGCCGACTTCAAACGGCGCATCAACGCCTTATTTAAATCCTCCTTTTTATCCGCGATCGCGGATAaaaag < 2:3753335/100‑6 CATGTCGAGATGGCATGCGGCTTAATATTGCCGACTTCAAACGGCGCATCAACGCCTTATTTAAATCCTCCTTTTTATCCGCGATCGCAGATATCGCAGC > 1:1718608/1‑100 CATGTCGAGATGGCATGCGGCTTAATATTGCCGACTTCAAACGGCGCATCAACGCCATATTTAAATCCTCCTTTTTATCTGCGAGCGCGGATATCGCAGC > 1:1599843/1‑100 GTCGAGATGGCATGCGGCTTAATATTGCCGACTTCAAACGGCGCATCAACGCCTTATTTAAATCCTCCTTTTTGTCCGCGATCGCGGATATCGCAGCGTT < 2:783960/100‑1 GTCGAGATGGCATGCGGCTTAATATTGCCGACTTCAAACGGCGCATCAACGCCTTATTTAAATCCTCCTTTTTATCCGCGATCGCGGATATCGCAGCGTT > 1:2691237/1‑100 CTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1592529‑1592638‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taagccgcatgTCGAGATGGCATGCGGCTTAATATTGCCGACTTCAAACGGCGCATCAACGCCTTATTTAAATCCTCCTTTTTATCCGCGATCGCGGATATCGCAGCGTT < NC_000913/1592647‑1592549 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |