BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3277819 =	NA (NA)	6 (0.050)	4/162	NT	NA	noncoding (1/29 nt)	REP238 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP238 (repetitive extragenic palindromic) element; contains 1 REP sequences
*	?	NC_000913	3277844 =	NA (NA)	6 (0.050)	4/162	NT	NA	noncoding (26/29 nt)	REP238 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP238 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 158 total aligned reads displayed.

CGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGG  >  NC_000913/3277720‑3277918

atgatcattgttgatgaaggcattcctgctgatagcctggaaggactgcgaaaggctggggttgaagtgattctggtcggggagtgagaaaggatgcccg                                                                                                     >  1:2713466‑M1/100‑100 (MQ=255)

 gTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCccgn                                                                                                    <  1:1960834/100‑2 (MQ=255)

  tATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCccgcc                                                                                                   <  2:1609919/100‑1 (MQ=255)

   aTTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCccgccg                                                                                                  <  2:2287706/100‑1 (MQ=255)

      cAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAAc                                                                                               >  2:1745958/1‑100 (MQ=255)

      cAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAAc                                                                                               <  1:803763/100‑1 (MQ=255)

      cAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAAc                                                                                               >  1:332385/1‑100 (MQ=255)

       aGCAAAATGTTAAAAAGAGGACATCCTCCTGCGGACTGGTAATCCCCCCCCCGAGAAACAGAAGACCCCCATTGATGGTGTTCACAATGCCCGCCGAACg                                                                                              <  1:2661793/100‑1 (MQ=255)

       aGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACg                                                                                              >  1:1022296/1‑100 (MQ=255)

       aGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACg                                                                                              <  1:455202/100‑1 (MQ=255)

       aGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGAAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACg                                                                                              <  1:3766691/100‑1 (MQ=255)

        gCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAAc                                                                                               >  1:1163886/1‑98 (MQ=255)

        gCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGc                                                                                             >  1:1182751/1‑100 (MQ=255)

                ttAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCgtgt                                                                                     >  2:1419431/1‑100 (MQ=255)

                ttAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCgtgt                                                                                     >  2:3646172/1‑100 (MQ=255)

                ttAAAAAAAGAGCATCCTCCTGCCGACTGGGAAACCCTCACCCGAGTAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCgtgt                                                                                     <  1:185783/100‑1 (MQ=255)

                 tAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACTGAAGGAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGtt                                                                                    <  2:209852/100‑1 (MQ=255)

                 tAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGtt                                                                                    >  2:2720692/1‑100 (MQ=255)

                 tAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCAATTGATGGTGTTCCCAATGCCCGCCGAACGCATTAGTGtt                                                                                    >  2:3615026/1‑100 (MQ=255)

                  aaaaaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTg                                                                                   <  2:185605/100‑1 (MQ=255)

                  aaaaaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTg                                                                                   >  2:26304/1‑100 (MQ=255)

                  aaaaaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTg                                                                                   <  2:90189/100‑1 (MQ=255)

                  aaaaaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTg                                                                                   <  1:156459/100‑1 (MQ=255)

                    aaaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGAc                                                                                 <  1:70687/100‑1 (MQ=255)

                     aaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGAcc                                                                                <  2:2460587/100‑1 (MQ=255)

                        agGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGc                                                                             >  1:2020112/1‑100 (MQ=255)

                         ggACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCg                                                                            <  2:1051464/100‑1 (MQ=255)

                           aCATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCggg                                                                          <  1:3094454/100‑1 (MQ=255)

                            cATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCggg                                                                          <  1:3411898/99‑1 (MQ=255)

                            cATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCAATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGc                                                                         >  2:622142/1‑100 (MQ=255)

                             ggatagcctggaaggactgcgaaaggctggggttgaagtgattctggtcggggagtgaggaaggatgcccGCCGAACGCATTCGTGTTGACCAGCGGGCa                                                                        >  1:2396324‑M1/71‑100 (MQ=255)

                             aTCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCa                                                                        >  2:470855/1‑100 (MQ=255)

                              tcctccTGCCGACTGGGAAACCCTCACCCGAGAACCAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCCGGcct                                                                       >  1:2189696/1‑98 (MQ=255)

                               cctcctGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATc                                                                      <  2:2480842/100‑1 (MQ=255)

                               atagcctggaaggactgcgaaaggctggggttgaagtgattctggtcggggagtgagaaaggatgcccGCCGAACGCATTCGTGTTGACCAGCGGGCATc                                                                      >  2:468327‑M1/69‑100 (MQ=255)

                                tagcctggaaggactgcgaaaggctggggttgaagtgattctggtcggggagtgagaaaggatgcccGCCGAACGCATTCGTGTTGACCAGCGGGCATcc                                                                     >  1:888284‑M1/68‑100 (MQ=255)

                                ctcctGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATcc                                                                     <  2:790520/100‑1 (MQ=255)

                                ctcctGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCAGTCGTGTTGACCAGCGGGCATcc                                                                     <  1:2203196/100‑1 (MQ=255)

                                   ctGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCttt                                                                  <  2:2955384/100‑1 (MQ=255)

                                   ctGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCttt                                                                  <  1:237532/100‑1 (MQ=255)

                                     tggaaggactgcgaaaggctggggttgaagtgattctggtcggggagtgagaaaggatgcccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtct                                                                >  2:1750865‑M1/63‑100 (MQ=255)

                                     gCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtct                                                                <  2:1334852/100‑1 (MQ=255)

                                      ccGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtctc                                                               >  2:2070600/1‑100 (MQ=255)

                                      ccGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtctc                                                               <  1:2319584/100‑1 (MQ=255)

                                       cGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACACATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCa                                                              >  2:2686009/1‑100 (MQ=255)

                                       cGACTGAGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtctc                                                               <  1:147249/99‑1 (MQ=255)

                                           tGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTcc                                                          <  2:612940/100‑1 (MQ=255)

                                            gggAAACCCTCACCCGAGAAACAGAAGCAACCCATTGATGGTGTTCGCAATGCCCGCCGAAAGCATTAGTGTTGACCAGCGGGCATCCTTTCTCACTccc                                                         >  1:258555/1‑100 (MQ=255)

                                            gggAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTccc                                                         <  2:2006230/100‑1 (MQ=255)

                                            gggAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTccc                                                         >  2:3401089/1‑100 (MQ=255)

                                            gggAAACCCGCACCCGAGAAACAGAAGAGACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCCTGTTGACCAGGGGGCATCCCGTCTCACTcc                                                          >  1:2248167/1‑99 (MQ=255)

                                             ggAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATACGTGTTGACCAGCGGGCATCCTTTCTCACTcccc                                                        >  1:1997764/1‑100 (MQ=255)

                                              gAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCg                                                       >  1:2806986/1‑100 (MQ=255)

                                                 aCCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGAcc                                                    <  1:2734761/100‑1 (MQ=255)

                                                  cccTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCa                                                   <  1:713432/100‑1 (MQ=255)

                                                  cccTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCACACTTACTCACTCCCCGACCa                                                   >  1:1346852/1‑100 (MQ=255)

                                                    cTCACCCGAGAAACAGAAGAAACCCATCGACGGTCTTCACAATGCCCCCCGAACGCGATCGTGTTGACCATCGCTCATCCTTTCTCACTCCCCGAcc                                                    >  1:923068/1‑97 (MQ=255)

                                                     tCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGaa                                                <  2:1972799/100‑1 (MQ=255)

                                                     tCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGa                                                 >  1:1940873/1‑99 (MQ=255)

                                                      cACCCGAGAAACAGAAGAAACCAAGTGATGGTAATCACAATGACCGCCGAACGCATTCGTGTTGACCACCGGGCACCCTTTCTCACTCCCCGACCAGAAt                                               >  1:1644374/1‑100 (MQ=255)

                                                       aCCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATc                                              <  2:1548384/100‑1 (MQ=255)

                                                        cccGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCa                                             >  2:2302790/1‑100 (MQ=255)

                                                         ccGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCAc                                            <  2:1208297/100‑1 (MQ=255)

                                                           gagaAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACtt                                          >  1:1246070/1‑100 (MQ=255)

                                                             gaAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCa                                        <  2:191914/100‑1 (MQ=255)

                                                               aaCAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAAc                                      <  2:2773123/100‑1 (MQ=255)

                                                               aaCAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAAc                                      >  1:2258543/1‑100 (MQ=255)

                                                                aCAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAAcc                                     <  2:3337359/100‑1 (MQ=255)

                                                                  ngaagaaACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAAcccc                                   >  1:591619/2‑100 (MQ=255)

                                                                  agaagaAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAAcccc                                   >  1:11512/1‑100 (MQ=255)

                                                                   gaagaaACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCa                                  >  1:2914072/1‑100 (MQ=255)

                                                                    aagaaCCCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAg                                 <  1:2578336/100‑1 (MQ=255)

                                                                    aagaaACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAg                                 <  2:1080315/100‑1 (MQ=255)

                                                                    aagaaACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAg                                 <  1:1570201/100‑1 (MQ=255)

                                                                    aagaaACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAg                                 <  1:3620684/100‑1 (MQ=255)

                                                                      gaaACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGcc                               >  2:2026162/1‑100 (MQ=255)

                                                                        aaCCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCtt                             >  2:3004470/1‑100 (MQ=255)

                                                                          cccATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTc                           <  1:1727775/100‑1 (MQ=255)

                                                                           ccATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCg                          >  2:763901/1‑100 (MQ=255)

                                                                           ccATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCg                          <  2:1389097/100‑1 (MQ=255)

                                                                            cATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGc                         <  2:965578/100‑1 (MQ=255)

                                                                            cATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGc                         <  2:2902004/100‑1 (MQ=255)

                                                                                gATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTc                     <  2:3722485/100‑1 (MQ=255)

                                                                                gATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTc                     <  1:470853/100‑1 (MQ=255)

                                                                                gATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTc                     >  1:3672423/1‑100 (MQ=255)

                                                                                 aTGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTcc                    <  2:382730/100‑1 (MQ=255)

                                                                                    gtgtTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTc                 >  1:140255/1‑100 (MQ=255)

                                                                                     tgtTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTcc                <  1:3239444/100‑1 (MQ=255)

                                                                                        tCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAgg             >  2:2751739/1‑100 (MQ=255)

                                                                                        tCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAgg             <  2:908214/100‑1 (MQ=255)

                                                                                        tCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAgg             >  1:1638219/1‑100 (MQ=255)

                                                                                        tCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAgg             >  1:3340478/1‑100 (MQ=255)

                                                                                        tCACAATGCCCGCCGAACACATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAgg             >  2:381872/1‑100 (MQ=255)

                                                                                         cacaATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGc            >  1:839438/1‑100 (MQ=255)

                                                                                         cacaATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGc            <  2:112305/100‑1 (MQ=255)

                                                                                               gcccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCg      <  2:740724‑M1/96‑1 (MQ=255)

                                                                                                 ccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCa    <  2:2087369‑M1/98‑1 (MQ=255)

                                                                                                  cGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTccttccaggcagatcggaa   <  1:3784888‑M1/99‑10 (MQ=255)

                                                                                                   GCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAgg  >  1:1037671‑M1/1‑100 (MQ=255)

                                                                                                   GCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACGCCCCGACCAGAATCACTTCAACCCCAGCCCTTCGCAGTCCTTCCAGGCTATCCGCAgg  >  1:798430‑M1/1‑100 (MQ=255)

CGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGG  >  NC_000913/3277720‑3277918

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.