New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4201782 =89 (0.640)16 (0.140) 9/144 NT 17.5% intergenic (‑94/‑144) zraP/zraS Zn‑dependent periplasmic chaperone/sensory histidine kinase in two‑component regulatory system with ZraR
?NC_000913 4201828 = 79 (0.700)intergenic (‑140/‑98) zraP/zraS Zn‑dependent periplasmic chaperone/sensory histidine kinase in two‑component regulatory system with ZraR

Only 100 of 209 total aligned reads displayed.

TTTCATGGTTAATCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATAAAAGATGG  >  NC_000913/4201683‑4201881
                                                                                                   |                                                                                                   
tttCATGGTTAATCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACG                                                                                                     <  1:3558340‑M1/100‑1 (MQ=255)
tcttcttctttgcctgctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatg                                                                                                     >  2:641213‑M1/100‑100 (MQ=255)
  ttcttctttgcctgctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAg                                                                                                   <  2:1525828‑M1/3‑1 (MQ=255)
  tCATGGTTAATCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAG                                                                                                   <  2:1095379‑M1/100‑1 (MQ=255)
   cATGGTTAATCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAAGGCTGATATGACGGGTAATCTGGCATGATAAACGAGT                                                                                                  >  2:2668279‑M1/1‑100 (MQ=255)
     tGGTTAATCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAA                                                                                                >  2:1880228‑M1/1‑100 (MQ=255)
      ggTTAATCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAA                                                                                               >  1:1917952‑M1/1‑100 (MQ=255)
         tAATCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAAT                                                                                            >  1:1589181‑M1/1‑100 (MQ=255)
          tgcctgctaatcactttctgagagcagaaatcatgccatcttttatcagcgcttagcctgcgctgtaacaaaaaggcttaagtttcaatGAGTAAAAATg                                                                                           <  2:1589187‑M1/11‑1 (MQ=255)
          aaTCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATG                                                                                           <  2:413809‑M1/100‑1 (MQ=255)
          aaTCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATG                                                                                           <  2:2517871‑M1/100‑1 (MQ=255)
          aaTCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATG                                                                                           <  2:3336670‑M1/100‑1 (MQ=255)
          aaTCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATG                                                                                           <  2:3463004‑M1/100‑1 (MQ=255)
          aaTCCTCCAGTGGTTGTCTTACTGCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATG                                                                                           <  2:1683914‑M1/100‑1 (MQ=255)
           aTCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGA                                                                                          >  1:539924‑M1/1‑100 (MQ=255)
            cctgctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGAc                                                                                         >  2:3366901‑M1/88‑100 (MQ=255)
             nctccaGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGAC                                                                                         >  1:1570403‑M1/2‑99 (MQ=255)
             ctgctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGACt                                                                                        <  1:2869378‑M1/14‑1 (MQ=255)
             ctgctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGACt                                                                                        >  1:300654‑M1/87‑100 (MQ=255)
               tccAGTGGTTGTCTTATTTGGGGTATTGCATCTTCAGTGCCAACGATGAAACGATGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACT                                                                                        >  1:11731‑M1/1‑98 (MQ=255)
                ctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGACTCGc                                                                                     <  2:2334732‑M1/17‑1 (MQ=255)
                 cAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGcc                                                                                    <  2:2299137/100‑1 (MQ=255)
                    tGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCctgc                                                                                 >  1:3456768/1‑100 (MQ=255)
                      gTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCctgctg                                                                               <  1:2536115/100‑1 (MQ=255)
                        tGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCg                                                                             >  2:1952261/1‑100 (MQ=255)
                        tGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCg                                                                             <  2:2131129/100‑1 (MQ=255)
                         gTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCgg                                                                            >  2:2369462/1‑100 (MQ=255)
                         gTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCgg                                                                            <  1:2818661/100‑1 (MQ=255)
                           cTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCtacccgcagca                                                                          <  2:3776511‑M1/100‑12 (MQ=255)
                           cTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGt                                                                          <  1:2135647/100‑1 (MQ=255)
                             tACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAg                                                                        <  2:1068518‑M2/100‑2 (MQ=255)
                              ncTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTANTCTGGCATGATAAACGAGTAAAAATGANTCGNCTGGTGCGNGTa                                                                         >  1:1628660/2‑98 (MQ=255)
                              aCTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAgc                                                                       <  2:3742007‑M2/100‑3 (MQ=255)
                               cTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAgcg                                                                      <  2:1186615‑M2/100‑4 (MQ=255)
                                  cGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAgcgagt                                                                   <  1:1807928‑M2/100‑7 (MQ=255)
                                  cGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAgcgagt                                                                   >  2:3200517‑M2/1‑94 (MQ=255)
                                   gggTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAgcgagt                                                                   >  2:781445‑M2/1‑93 (MQ=255)
                                      tATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCtacccgcagcaggcgagtcatt                                                               <  2:2599097‑M1/100‑23 (MQ=255)
                                       atcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCAttt                                                              >  1:2946000‑M1/61‑100 (MQ=255)
                                       atcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCAttt                                                              >  1:1832590‑M1/61‑100 (MQ=255)
                                       atcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCAttt                                                              >  2:1404171‑M1/61‑100 (MQ=255)
                                        ttGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAgcgagtcatttt                                                             >  1:1105502‑M2/1‑88 (MQ=255)
                                        tcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCAtttt                                                             >  2:2120584‑M1/60‑100 (MQ=255)
                                          gCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAgcgagtcattttta                                                           <  1:2772533‑M2/100‑15 (MQ=255)
                                          gCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAgcgagtcattttta                                                           <  2:1384692‑M2/100‑15 (MQ=255)
                                          gCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAgcgagtcattttta                                                           <  2:177759‑M2/100‑15 (MQ=255)
                                           cATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTCgcgagtcatttttac                                                          <  2:3747307‑M2/100‑16 (MQ=255)
                                           cATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAgcgagtcatttttac                                                          >  2:673848‑M2/1‑85 (MQ=255)
                                            aTCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCtacccgcagcaggcgagtcatttttact                                                         <  1:1196839‑M1/100‑29 (MQ=255)
                                             tCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCtacccgcagcaggcgagtcatttttactc                                                        <  1:2514806‑M1/100‑30 (MQ=255)
                                             ccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAACAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTc                                                        >  2:2822949‑M1/55‑100 (MQ=255)
                                               ttCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCAt                                                      >  1:3758693/1‑100 (MQ=255)
                                                tcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCAtt                                                     >  2:3166000‑M1/52‑100 (MQ=255)
                                                tCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCAtt                                                     <  2:239533/100‑1 (MQ=255)
                                                tCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCAtt                                                     <  1:3532236/100‑1 (MQ=255)
                                                 ccGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTg                                                    <  1:338225/100‑1 (MQ=255)
                                                  cGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCtacccgcagcaggcgagtcatttttactcgttta                                                   <  2:1865034‑M1/100‑35 (MQ=255)
                                                    tGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAACATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGaaa                                                 <  1:2607197/100‑1 (MQ=255)
                                                    tGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAgcgagtcatttttactcgtttatc                                                 <  2:2719948‑M2/100‑25 (MQ=255)
                                                    tGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGaaa                                                 <  2:1676700/100‑1 (MQ=255)
                                                     gCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAAc                                                >  1:1660987/1‑100 (MQ=255)
                                                       cAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTCTTACTCATTGAAACtt                                              >  1:2220238/1‑100 (MQ=255)
                                                           gATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGc                                          >  2:2452663/1‑100 (MQ=255)
                                                           gATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGc                                          >  1:556736/1‑100 (MQ=255)
                                                            aTGAAACGCTGATATGCCGGGTAAACTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGCATAGCCAGTCATCCTTCCTCATTGAAACTTAAGcc                                         >  1:738560/1‑100 (MQ=255)
                                                            aTGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGcc                                         >  1:488700/1‑100 (MQ=255)
                                                             tGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCt                                        >  2:2850911/1‑100 (MQ=255)
                                                              gAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCtt                                       <  1:3674279/100‑1 (MQ=255)
                                                               aaaCGCTGATATGACGGGTAGTCTGGCATGATAAACGAGTAAAAATGACTCGCCTAATGAGCCTAACGAGCCATTTTTACTCATTGAAACTTAAGCCttt                                      >  1:2419925/1‑100 (MQ=255)
                                                                aaCGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTtg                                     >  2:1889171/1‑100 (MQ=255)
                                                                aaCGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTtg                                     <  2:1157010/100‑1 (MQ=255)
                                                                aaCGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTtg                                     <  2:699165/100‑1 (MQ=255)
                                                                aaCGCTGATATGACGGGTAATCTGGCATGATAAACGAGGAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTtg                                     >  1:2334722/1‑100 (MQ=255)
                                                                      gATATGACGAGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTAc                               >  1:3218821/1‑100 (MQ=255)
                                                                        tatGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAg                             <  2:342681/100‑1 (MQ=255)
                                                                         atGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAgc                            <  1:1427242/100‑1 (MQ=255)
                                                                             cGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTCCAGCGCa                         >  1:3038439/1‑99 (MQ=255)
                                                                             cGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAg                        <  1:891972/100‑1 (MQ=255)
                                                                             cGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAg                        >  2:2909255/1‑100 (MQ=255)
                                                                              gggTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAgg                       >  2:877505/1‑100 (MQ=255)
                                                                               ggTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAggg                      <  1:1038694/100‑1 (MQ=255)
                                                                                 tAATCTGGCATGATAAACGAGTAAAAATGACTCACCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAGCTTAAGCCTTTGTGTTACAGCGCa                         >  1:2283587/1‑95 (MQ=255)
                                                                                    tCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAgc                 >  2:2539213/1‑100 (MQ=255)
                                                                                     cTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAgcg                >  2:1808231/1‑100 (MQ=255)
                                                                                      tGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAgcgc               >  2:1511906/1‑100 (MQ=255)
                                                                                      tGGCAGGATAAACGAGTACAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTAATAATTGAAACTTCAGCGTTTTTGTTACAGCACAGGGt                     >  1:3315520/1‑94 (MQ=255)
                                                                                       ggCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCt              <  1:2961962/100‑1 (MQ=255)
                                                                                        gCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTg             >  1:44507/1‑100 (MQ=255)
                                                                                           tGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATa          >  2:113586/1‑100 (MQ=255)
                                                                                            gATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATaa         >  1:2744195/1‑100 (MQ=255)
                                                                                              tAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATaaaa       >  1:412974/1‑100 (MQ=255)
                                                                                               aaaCGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATAAAAg      >  2:3282021/1‑100 (MQ=255)
                                                                                                aaCGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATAAAAGa     <  2:3576851/100‑1 (MQ=255)
                                                                                                aaCGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATAAAAGa     >  1:2757062/1‑100 (MQ=255)
                                                                                                 aCGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATAAAAGAt    >  2:3294710/1‑100 (MQ=255)
                                                                                                  cGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATAAAAGATg   >  1:309709/1‑100 (MQ=255)
                                                                                                   gAGTAAAAATGACTCGCtacccgcagcaggcgagtcatttttactcgtttatcatgccagcttacccgtcatatcagcgtttcatcgttggcacggaag   >  1:1737043‑M1/1‑17 (MQ=255)
                                                                                                   gAGTAAAAATGACTCGCtacccgcagcaggcgagtcatttttactcgtttatcatgccagattacccgtcatatcagcgtttcatcgttggcacggaaga  >  2:1060317‑M1/1‑17 (MQ=255)
                                                                                                   GAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATAAAAGATgg  >  1:2668263‑M1/1‑100 (MQ=255)
                                                                                                   GAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATAAAAGATgg  >  2:1017610‑M1/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
TTTCATGGTTAATCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATAAAAGATGG  >  NC_000913/4201683‑4201881

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.