BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4629401 =	146 (1.050)	4 (0.030)	3/164	NT	3.1%	coding (1122/1668 nt)	ettA	energy‑dependent translational throttle A
*	?	NC_000913	4629431 =	119 (0.930)	4 (0.030)	3/164	NT	3.1%	coding (1092/1668 nt)	ettA	energy‑dependent translational throttle A
Rejected: Frequency below cutoff threshold.

Only 100 of 171 total aligned reads displayed.

TTCTTCCCAAACGGTTTTGCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGG  >  NC_000913/4629302‑4629500

ttcttcCCAAACGGTTTTGCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGc                                                                                                     <  2:137430/100‑1 (MQ=255)

ttcttcCCAAACGGTTTTGCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGc                                                                                                     <  1:3185074/100‑1 (MQ=255)

tcctatggcgatcgtctgctgattgatgacctgagcttctcgatcccgaaaggagcgatcgtcgggatcatcggtccgaacggtgcgggtaaatcgaccc                                                                                                     >  1:2368024‑M1/100‑100 (MQ=255)

 cctatggcgatcgtctgctgattgatgacctgagcttctcgatcccgaaaggagcgatcgtcgggatcatcggtccgaacggtgcgggtaaatcgaccCt                                                                                                    >  1:402717‑M1/99‑100 (MQ=255)

  cttcCCAAACGGTTTTGCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTg                                                                                                   >  2:1366895/1‑100 (MQ=255)

     tggcgatcgtctgctgattgatgacctgagcttctcgatcccgaaaggagcgatcgtcgggatcatcgggccgaacggtgcgggtaaatcgaccCTg                                                                                                   <  1:1008039‑M1/3‑1 (MQ=255)

     cccAGACGGTTTTGCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTc                                                                                                >  2:3437129/1‑100 (MQ=255)

     cccAAACGGTTTTGCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTTTCCGGCTGtt                                                                                                 >  2:747429/1‑99 (MQ=255)

     cccAAACGGTTTTGCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTc                                                                                                >  1:891666/1‑100 (MQ=255)

           cGGTTTTGCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGAcc                                                                                          <  2:2372396/100‑1 (MQ=255)

            ggTTTTGCTGTTATACATTGAGTCACGGAACTGATCAACCGACTCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCa                                                                                         >  1:1079863/1‑100 (MQ=255)

              ttttGCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCata                                                                                       <  2:3526278/100‑3 (MQ=255)

                 tGCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGAt                                                                                    >  1:1949414/1‑100 (MQ=255)

                 tGCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGAt                                                                                    >  2:198203/1‑100 (MQ=255)

                  gCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGTCAGTTTCACCGTTTCACCCGAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATc                                                                                   <  1:2062268/100‑1 (MQ=255)

                  gCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATc                                                                                   <  2:3686301/100‑1 (MQ=255)

                  gCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATc                                                                                   <  2:1833138/100‑1 (MQ=255)

                  gCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATc                                                                                   <  2:3221492/100‑1 (MQ=255)

                  gCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATc                                                                                   <  2:3322349/100‑1 (MQ=255)

                  gCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATc                                                                                   <  1:1185378/100‑1 (MQ=255)

                   cTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCa                                                                                  >  2:45308/1‑100 (MQ=255)

                    tGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCAt                                                                                 >  2:1317912/1‑100 (MQ=255)

                    tGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCAt                                                                                 >  1:2590359/1‑100 (MQ=255)

                     gTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATa                                                                                <  2:57176/100‑1 (MQ=255)

                      ttATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATa                                                                                <  1:2303046/99‑1 (MQ=255)

                      ttATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATAc                                                                               <  1:1866727/100‑1 (MQ=255)

                      ttATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATAc                                                                               <  2:2019741/100‑1 (MQ=255)

                       tATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACg                                                                              >  2:2761902/1‑100 (MQ=255)

                       tATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACg                                                                              <  2:2177678/100‑1 (MQ=255)

                          ccATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGaa                                                                           >  2:601012/1‑100 (MQ=255)

                           cATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAAc                                                                          >  2:298045/1‑100 (MQ=255)

                            aTTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACa                                                                         <  1:2086119/100‑1 (MQ=255)

                              tGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAgg                                                                       >  1:2008449/1‑100 (MQ=255)

                               tgagcttctcgatcccgaaaggagcgatcgtcgggatcatcggtccgaacggtgcgggtaaatcgaccCTGTTCCTGACCAGAGATCATACGGAACAggg                                                                      >  1:338479‑M1/69‑100 (MQ=255)

                               gAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAggg                                                                      >  1:1360374/1‑100 (MQ=255)

                                 gTCACGGAACTGATCAACCGACGCCAGTTTCACCGTCTCACCCAAAGTGATGATGCCGCTGTCCGGCTGTTCCTCACCAGAGATCATACGGAACAAGGTc                                                                    >  1:564978/1‑100 (MQ=255)

                                   cttctcgatcccgaaaggagcgatcgtcgggatcatcggtccgaacggtgcgggtaaatcgaccCTGTTCCTGACCAGAGATCATACGGAACAGGGTc                                                                    >  1:2300053‑M1/65‑98 (MQ=255)

                                   cACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCg                                                                   >  1:232947/1‑99 (MQ=255)

                                   cACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGa                                                                  >  2:1624884/1‑100 (MQ=255)

                                    gctcttccgATCTACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGAt                                                                 <  1:904189/92‑1 (MQ=255)

                                    aCGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGCCTGTTCCTGCCCACAGCTCCTACGGCACAGGCTc                                                                    >  1:3525507/1‑97 (MQ=255)

                                          cTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTAccc                                                           >  1:3548892/1‑100 (MQ=255)

                                          cTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTAccc                                                           >  1:2464269/1‑100 (MQ=255)

                                          cTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTAccc                                                           >  2:30136/1‑100 (MQ=255)

                                           tGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCg                                                          <  2:1643927/100‑1 (MQ=255)

                                            gATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGc                                                         <  2:1386/100‑1 (MQ=255)

                                                 aCCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGt                                                    <  2:1199402/100‑1 (MQ=255)

                                                 aCCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGt                                                    >  1:1828304/1‑100 (MQ=255)

                                                 aCCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGt                                                    >  2:2717260/1‑100 (MQ=255)

                                                 aCCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGt                                                    >  2:196628/1‑100 (MQ=255)

                                                 aCCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGt                                                    >  2:196958/1‑100 (MQ=255)

                                                  ccGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGtt                                                   >  2:1531454/1‑100 (MQ=255)

                                                   cGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTc                                                  >  2:482723/1‑100 (MQ=255)

                                                   cGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTCCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTc                                                  <  2:2954538/100‑1 (MQ=255)

                                                      cGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGa                                               >  1:23346/1‑100 (MQ=255)

                                                      cGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGa                                               >  2:1842389/1‑100 (MQ=255)

                                                       gCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGAc                                              >  2:2501290/1‑100 (MQ=255)

                                                       gCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGAc                                              <  2:560066/100‑1 (MQ=255)

                                                         cAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCg                                            >  2:3463926/1‑100 (MQ=255)

                                                         cAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCg                                            >  2:3043485/1‑100 (MQ=255)

                                                         cAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCg                                            >  1:320166/1‑100 (MQ=255)

                                                          aGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCga                                           >  2:3381134/1‑100 (MQ=255)

                                                            tttcaccgtttcattCAAAGTGATGGTGCCGCTGTCCGTCTGTTCCTGACTAGAGATCATACGGAACAGTGTCGATTTACCCGCACCGTTCGGACCg                                            <  1:2133740/97‑1 (MQ=255)

                                                            tttcaccgtttcaccCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGTTCGATTTACCCGCACCGTTCGGACCgatg                                         >  1:3719142/1‑100 (MQ=255)

                                                              tcaccgtttcaccCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCgatgat                                       >  2:3175328/1‑100 (MQ=255)

                                                               caccgtttcaccCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATc                                      <  2:1100916/100‑1 (MQ=255)

                                                                accgtttcaccCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATcc                                     <  2:2721493/100‑1 (MQ=255)

                                                                accgtttcaccCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATcc                                     <  1:2649627/100‑1 (MQ=255)

                                                                accgtttcaccCAAACTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATcc                                     <  2:3740561/100‑1 (MQ=255)

                                                                  cgtttcaccCACAGTGATGGTGCCACTGTCAGGCTGTTCCTGACCAGAGACCAAACGGAACAGGGCCGATTTACCCGCACCGTTCGGACCGATGATccag                                   >  1:2641469/1‑98 (MQ=255)

                                                                  cgtttcaccCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCcg                                   <  2:294811/100‑1 (MQ=255)

                                                                   gtttcaccCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCcga                                  >  2:3378865/1‑100 (MQ=255)

                                                                    tttcaccCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCcgac                                 <  2:1456060/100‑1 (MQ=255)

                                                                    tttcaccCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCcgac                                 <  1:3151219/100‑1 (MQ=255)

                                                                        accCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCGGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATc                             <  2:261149/100‑1 (MQ=255)

                                                                         cccAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCg                            >  2:2126407/1‑100 (MQ=255)

                                                                         cccAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCg                            <  1:1003307/100‑1 (MQ=255)

                                                                         cccAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCg                            >  2:615247/1‑100 (MQ=255)

                                                                         cccAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCg                            >  1:486168/1‑100 (MQ=255)

                                                                          ccAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGc                           >  1:1598655/1‑100 (MQ=255)

                                                                           cAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCt                          >  2:195684/1‑100 (MQ=255)

                                                                           cAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCt                          <  1:3376909/100‑1 (MQ=255)

                                                                              aGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCt                       <  2:2869974/100‑1 (MQ=255)

                                                                               gTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGcccc                        >  1:1187490/1‑98 (MQ=255)

                                                                                 gATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTc                    <  2:1152297/100‑1 (MQ=255)

                                                                                  aTGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCg                   <  2:549562/100‑1 (MQ=255)

                                                                                   tGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCgg                  <  1:679824/100‑1 (MQ=255)

                                                                                      tGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGAt               <  1:2142481/100‑1 (MQ=255)

                                                                                       gCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATc              >  1:1908653/1‑100 (MQ=255)

                                                                                       gCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATc              <  1:1623338/100‑1 (MQ=255)

                                                                                        ccGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCg             >  2:863517/1‑100 (MQ=255)

                                                                                          gCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCgag           >  1:3250086/1‑100 (MQ=255)

                                                                                          gCTGTACGGCTGTTCCTGACCAGAGATCATACGGGATAGGGTCGCTTTACCCGCACCGTTAGGACCGATGATCCCGACGATCCCTCCCTTCATGATc              >  1:2894096/1‑97 (MQ=255)

                                                                                              tCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGc       >  2:347071/1‑100 (MQ=255)

                                                                                              tCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGc       <  2:2732776/100‑1 (MQ=255)

                                                                                              tCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGc       <  2:229285/100‑1 (MQ=255)

                                                                                              tCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTATCGGGATCGAGAAGc       >  2:3740209/1‑100 (MQ=255)

                                                                                                 ggCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCa    >  2:3084860/1‑100 (MQ=255)

                                                                                                 ggCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCa    >  1:457484/1‑100 (MQ=255)

                                                                                                 ggCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCa    <  1:944213/100‑1 (MQ=255)

TTCTTCCCAAACGGTTTTGCTGTTATCCATTGAGTCACGGAACTGATCAACCGACGCCAGTTTCACCGTTTCACCCAAAGTGATGGTGCCGCTGTCCGGCTGTTCCTGACCAGAGATCATACGGAACAGGGTCGATTTACCCGCACCGTTCGGACCGATGATCCCGACGATCGCTCCTTTCGGGATCGAGAAGCTCAGG  >  NC_000913/4629302‑4629500

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.