| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 705938 | NA (NA) | 9 (0.070) | 6/166 | NT | NA | intergenic (+48/‑155) | nagE/glnS | N‑acetyl glucosamine specific PTS enzyme IIC, IIB, and IIA components/glutamyl‑tRNA synthetase |
| ? | NC_000913 | = 705965 | NA (NA) | intergenic (+75/‑128) | nagE/glnS | N‑acetyl glucosamine specific PTS enzyme IIC, IIB, and IIA components/glutamyl‑tRNA synthetase | |||||
Only 100 of 156 total aligned reads displayed.
TCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGT > NC_000913/705839‑706037 | tCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGAc < 1:1198110/100‑1 (MQ=255) cAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACa > 2:625934‑M1/1‑99 (MQ=255) ggCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTTATGCGACGCTTGAGCGTCGCATCCAACAATGACaagc < 1:2038176‑M1/100‑5 (MQ=255) gCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACaagcg > 1:2792091‑M1/1‑95 (MQ=255) gCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACaagcg > 2:1601638‑M1/1‑95 (MQ=255) atatGGTGGCGCGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTg < 1:3667000/100‑1 (MQ=255) ttGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGgag < 2:827147/100‑1 (MQ=255) tgGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGAtc < 2:890631/100‑1 (MQ=255) tgGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGAtc < 1:3239038/100‑1 (MQ=255) ggCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGAtct < 2:3525098/100‑1 (MQ=255) ggCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGAtct > 2:233681/1‑100 (MQ=255) gggTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGAtcttct > 1:1095935/1‑100 (MQ=255) gggTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGAtcttct > 1:935720/1‑100 (MQ=255) gTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTctct > 2:2594814/1‑100 (MQ=255) tCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTg < 2:1204936/100‑1 (MQ=255) aaaCACTGCTGTATGAAATCAAAAAGTAATCTGCTTAATGGCGGATGCGACGCTTTATCGTGGTATGCATCGAAGACAGGCGGGGGTGATCTTCTCTGcc > 1:1310697/1‑100 (MQ=255) aaaCACCGCTGTATGAAAACAAAAAGGAATCTGCATTATGGCTGATGTGACACTTGTGCGTCGTATATAACAATGACAACCGTTGAAGATCTTCTTTGc > 1:1314342/1‑99 (MQ=255) aaCACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCG > 2:467509‑M2/1‑100 (MQ=255) acacCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACaagcggcagagaagatctccaccgc < 1:3719187‑M1/100‑26 (MQ=255) cacCGCTGTATGAAATCAAAAAGTAATCTTCTTTATGCCTGATGCGACGCTTGATCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCG > 2:1867425‑M2/1‑98 (MQ=255) cacCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACaagcggcagagaagatctccaccgct < 1:3356557‑M1/100‑27 (MQ=255) ccGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACaagcggcagagaagatctccaccgcttg < 2:1134130‑M1/100‑29 (MQ=255) cGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACaagcggcagagaagatctccaccgcttgt < 2:17528‑M1/100‑30 (MQ=255) cGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑tttt > 2:2062236/1‑100 (MQ=255) cGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGAGTCGCATCCAACAATGACaagcggcagagaagatctccaccgcttg < 1:2098318‑M1/99‑29 (MQ=255) tATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑ttttttttt < 2:713049/100‑1 (MQ=255) tATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑ttttttttt < 1:3139770/100‑1 (MQ=255) aTGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTtc < 1:3150017/100‑1 (MQ=255) aTGAAATCAAAAAGTAATCGGCTTTATGCCTGATGCGACGCTTGAGCGGCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTtc < 1:685673/100‑1 (MQ=255) tGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCTGTGGAGATCTTCTCTGCCGC‑ttttttttgcg > 2:1120591/1‑97 (MQ=255) tGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑ttttttttcat > 1:772160/1‑97 (MQ=255) gAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTtcat > 1:878943/1‑100 (MQ=255) aaaTCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTtcatc < 1:3509538/100‑1 (MQ=255) aaaTCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTtcat > 2:2937784/1‑99 (MQ=255) aaTCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTtcatca < 2:591039/100‑1 (MQ=255) tCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCatcaat > 2:593462/1‑100 (MQ=255) tCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCatcaa > 1:968324/1‑99 (MQ=255) cAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTAAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCatcaatc > 2:2676187/1‑100 (MQ=255) gTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATcccc > 2:2103962/1‑100 (MQ=255) gTAATCAGCTTGATGCCTGATGCGACGGTTGGGCGTCGCATCCAACATTTACAAGCGGTGGAGATCTTCTCTGCCGCTTTTTTTTTTCATCAATCATcc < 1:2290658/99‑1 (MQ=255) aaTCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCAt < 2:1567493/100‑1 (MQ=255) aTCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATa > 1:3049331/1‑100 (MQ=255) tCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGGGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATaa < 2:580984/100‑1 (MQ=255) cTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGGGGAGAGCTTCTCTGCCGC‑TTTTTTTTTCAGCAATCATCCCCATAAt > 1:3558277/1‑100 (MQ=255) ccTTTATTCCTGATGCAACACATGAGCGTCACAACCAACAAAGACAAGCGGATGAGAACTGCTCTGCCGC‑TTTTTTTTTCATCAATAATATCCATAAt > 1:1675122/2‑98 (MQ=255) tGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTa < 1:1252023/100‑1 (MQ=255) gCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAg > 2:3202145/1‑100 (MQ=255) gCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAg > 2:2400810/1‑100 (MQ=255) gCCTGATGCGACGCATGAGCGACGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAg < 2:1289451/100‑1 (MQ=255) gCCGGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAg < 2:1100365/100‑1 (MQ=255) cTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGAt < 2:1743432/100‑1 (MQ=255) gATGCGACGCTTGAGCGTCGCATCCAACAATGACTAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTa < 1:173661/100‑1 (MQ=255) gATGCGACGCTCAAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTa > 2:3556306/1‑100 (MQ=255) gATGCGACGCTCAAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTCTTCATCCATCCTCCCAATAATCCTTGTTAGATTa > 1:2001568/1‑100 (MQ=255) aTGCGACGCTTGAGCGTCGCATCTAACTATGACATGCGGTGGAGATCTTTTTTGCCGT‑TTTTTTTTTTATCAATCATCCCCATAATCCTTGTTAGATTAt < 1:3339786/100‑1 (MQ=255) aTGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTan < 2:3273526/100‑2 (MQ=255) aTGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTAt < 2:2330553/100‑1 (MQ=255) aTGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑‑TTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATc > 2:3424330/1‑100 (MQ=255) aTGCGACGCTCAAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTAt > 2:3181751/1‑100 (MQ=255) aTGCGACGCTCAAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTAt > 2:2948581/1‑100 (MQ=255) gCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCa < 2:1778877/100‑1 (MQ=255) cGACGCTTTAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCaa > 2:789088/1‑100 (MQ=255) gACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATTCCCATAATCCTTGTTAGAtt > 1:1735912/1‑94 (MQ=255) gACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAAt > 2:394524/1‑100 (MQ=255) gCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGT‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAAttt < 1:2776866/99‑1 (MQ=255) ctcaaGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTa > 2:3620884/5‑100 (MQ=255) cTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTa > 1:1594941/1‑100 (MQ=255) cTTGACCGTCGCATCCAACAATGACACGCGGTGGAGATCTTCTCCGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAAtttt < 2:196122/99‑1 (MQ=255) ttGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTaa < 1:261284/100‑1 (MQ=255) ttGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTT‑TTTATTTATCCCCATAATCCTTGTTAGATTATTAATTTTaaa > 1:2586655/1‑100 (MQ=255) gAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCCTAATCCTTGTTAGATTATCAATTTTaaaa > 2:2300894/1‑100 (MQ=255) gAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTaaaa < 2:1881871/100‑1 (MQ=255) gAGCGTCGCATCAAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTaaaa < 2:260620/100‑1 (MQ=255) gAGCCTCGCATCCAACAATTACAATCGGTGCAGATCTTATCTGCCTC‑TTTTTTTTTCATCAATCATCTCCATAATCCTTGTTAGATTATCAATTTTaa < 1:2141226/98‑1 (MQ=255) cGTCGCATCCAAAAATAAAAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAAc < 2:965747/100‑1 (MQ=255) gTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATTAATAATCCCCATAATCCTTGTTAGATTATCAATTTTaaaaa > 1:478267/1‑97 (MQ=255) gTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACt > 2:533819/1‑100 (MQ=255) tCGCATCCAACAATTACAAGCGGTGGAGATCTTCTCTTCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTa < 1:637817/100‑1 (MQ=255) tCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTa < 2:3613400/100‑1 (MQ=255) gCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAAc > 2:3291444/1‑100 (MQ=255) gCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAAc > 1:194266/1‑100 (MQ=255) gCATCCAACAATGAAAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAAc < 1:345560/100‑1 (MQ=255) cATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCCTGTTAAATTATCAATTTTAAAAAAATaa > 2:2224462/1‑98 (MQ=255) aTCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAAc < 1:1218381/94‑1 (MQ=255) tCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGt < 1:3288951/100‑1 (MQ=255) aacaaTGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGt < 1:1680719/100‑1 (MQ=255) aacaaTGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGt > 1:3312223/1‑100 (MQ=255) aaTGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTgtcattgttggatgcgacgctcaagcgtcgcatcaggcataaagcagattactttttgatttcatac < 2:2339885‑M2/100‑68 (MQ=255) aaTGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAg < 1:1122650/100‑1 (MQ=255) aaTGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAg < 2:191542/100‑1 (MQ=255) aTGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTgtcattgttggatgcgacgctcaagcgtcgcatcaggcataaagcagattactttttgatttcataca < 1:1173611‑M2/100‑69 (MQ=255) tGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGcc < 2:557170/100‑1 (MQ=255) tGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGcc < 1:909614/100‑1 (MQ=255) tGACAAGCGGTGGAGATCTTCTCTGCCGC‑TATTCTTTTCATCAATCCTCCCCATATTCCTTGTTATATTATCAATTTTAAAAAACTAACGTTTGTCAGcc > 1:2496338/1‑100 (MQ=255) gACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGcc < 2:1177221/99‑1 (MQ=255) gACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCt > 2:3766846/1‑100 (MQ=255) aCAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTg < 2:1143409/100‑1 (MQ=255) cAAGCGGTGGAGATCTTCTCTGCCGC‑TTgtcattgttggatgcgacgctcaagcgtcgcatcaggcataaagcagattactttttgatttcatacagcgg < 2:2024997‑M2/100‑73 (MQ=255) cAAGCGGTGGAGATCTTCTCTGCCGC‑TTgtcattgttggatgcgacgctcaagcgtcgcatcaggcataaagcagattactttttgatttcatacagc < 1:651585‑M2/98‑71 (MQ=255) cAAGCGGGGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTg < 1:3111397/99‑1 (MQ=255) | TCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGT > NC_000913/705839‑706037 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |