New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 937227NA (NA)3 (0.020) 3/162 NT NA noncoding (4/36 nt) REP85 (repetitive extragenic palindromic) element; contains 1 REP sequences REP85 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 937259 NA (NA)noncoding (36/36 nt) REP85 (repetitive extragenic palindromic) element; contains 1 REP sequences REP85 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 169 total aligned reads displayed.

GAACAGATGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAG  >  NC_000913/937130‑937326
                                                                                                 |                                                                                                   
gAACAGATGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATgc                                                                                                   >  2:3091096‑M1/1‑98 (MQ=255)
gAACAGACGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATgc                                                                                                   >  2:1994834‑M1/1‑98 (MQ=255)
 gagggaactcccgatcgggagttccctctactctctattccaggctaataatcagcttgaggaaagaagaaaatactgaattttcagttgatagagTGcc                                                                                                  <  2:1154417‑M1/4‑1 (MQ=255)
 aaCAGATGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATgcc                                                                                                  >  1:1991758‑M1/1‑97 (MQ=255)
  aCAGATGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATgccg                                                                                                 <  1:1459407‑M1/100‑5 (MQ=255)
   cAGATGGAAGCGCAGGGGATTGTCAGTGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATgccgg                                                                                                <  2:119154‑M1/100‑6 (MQ=255)
    ggaactcccgatcgggagttccctctactctctattccaggctaataatcagcttgaggaaagaagaaaatactgaattttcagttgatagagTGCCgg                                                                                                <  2:1696177‑M1/6‑1 (MQ=255)
      cactcccgatcgggagttccctctactctctattccaggctaataatcagcttgaggaaagaagaaaatactgaattttcagttgatagagTGCCgg                                                                                                <  1:1025000‑M1/6‑1 (MQ=255)
      aTGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATa                                                                                             <  2:2231841/100‑1 (MQ=255)
         gAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAGTCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAgg                                                                                          <  1:3051719/100‑1 (MQ=255)
         gAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAgg                                                                                          >  1:162547/1‑100 (MQ=255)
         gAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAgg                                                                                          <  1:663824/100‑1 (MQ=255)
         gAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAgg                                                                                          >  1:2899341/1‑100 (MQ=255)
         gAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGGGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAgg                                                                                          <  2:266013/100‑1 (MQ=255)
            gcgcAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGgcgc                                                                                       <  2:3560938/100‑1 (MQ=255)
              gcAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCgg                                                                                     <  2:136922/100‑1 (MQ=255)
              gcAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCgg                                                                                     <  2:844417/100‑1 (MQ=255)
                 tctgATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAg                                                                                  <  1:2976653/97‑1 (MQ=255)
                 ggggATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAg                                                                                  >  2:3371371/1‑100 (MQ=255)
                   ggATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATACGGCGCGGTAGCg                                                                                >  2:400364/1‑100 (MQ=255)
                   ggATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGc                                                                                 >  1:710761/1‑99 (MQ=255)
                   ggATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCg                                                                                <  2:2073661/100‑1 (MQ=255)
                   ggATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCg                                                                                <  2:1444018/100‑1 (MQ=255)
                   ggATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCg                                                                                >  2:1599748/1‑100 (MQ=255)
                   ggATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCAACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCg                                                                                <  1:3475487/100‑1 (MQ=255)
                    gATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAgaga                                                                               >  2:2976672/1‑97 (MQ=255)
                       tGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCg                                                                             <  1:471843/99‑1 (MQ=255)
                        gTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCA                                                                           >  1:2101624‑M2/1‑100 (MQ=255)
                        gTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACGAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCA                                                                           <  1:2664158‑M2/100‑1 (MQ=255)
                         tCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCAT                                                                          <  2:922449‑M2/100‑1 (MQ=255)
                          cAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATC                                                                         <  2:216616‑M2/100‑1 (MQ=255)
                          cAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCAT                                                                          <  1:3522098‑M2/99‑1 (MQ=255)
                          cAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACGAACTAATGCATCGTATGCCGGATACGGCGCGGTAGCGTCGCATC                                                                         <  1:1019745‑M2/100‑1 (MQ=255)
                           aGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCC                                                                        <  1:2940951‑M2/100‑1 (MQ=255)
                           aGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCC                                                                        >  2:2302689‑M2/1‑100 (MQ=255)
                              ccgatctggcacaacgGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGC                                                                     >  1:110470‑M2/8‑100 (MQ=255)
                                 ctctattccaggctaataatcagcttgaggaaagaagaaaatactgaattttcagttgatagagTGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCAct                                                                  >  1:2821534‑M1/65‑100 (MQ=255)
                                 cAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCTCCGGCGTTTGACTAACTAATGCATCGTATgccggatgcgacgctaccgcgccttatccggcat                                                                   <  1:2410650‑M1/99‑35 (MQ=255)
                                 cAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCAct                                                                  <  2:3413119/100‑1 (MQ=255)
                                   ggggCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGTTAGCGTCGCATCCGGCaccct                                                                <  1:3490047‑M2/100‑6 (MQ=255)
                                     ggCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCagatcgg                                                              <  2:110470‑M2/100‑8 (MQ=255)
                                      ttccgggctaataatcagcttgaggaaagaagaaaatactgaattttcagttgatagagTGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATc                                                             >  2:1765022‑M1/60‑100 (MQ=255)
                                         caACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAAc                                                          >  1:1121738/1‑100 (MQ=255)
                                          aaCGTTAATTGTTAAGTGCTTGCCCCACCGCCGTGTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACt                                                         <  1:1305417/100‑1 (MQ=255)
                                           gcctaataatcagcttgaggaaagaagaaaatactgaattttcagttgctagagTGCCGTATAAGGCGCGGTAGCGTCGCATCCGGCActc                                                                 >  1:2604459‑M1/55‑91 (MQ=255)
                                             ggTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGaa                                                      >  1:1949686/1‑100 (MQ=255)
                                                  tCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTACTGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTc                                                 <  2:1884181/100‑1 (MQ=255)
                                                  tCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTc                                                 >  1:2237276/1‑100 (MQ=255)
                                                  tCGTGAAGTGCTGGCCCCACCGACGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTc                                                 >  1:2197531/1‑100 (MQ=255)
                                                    gTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAg                                               <  2:3137392/100‑1 (MQ=255)
                                                    gTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAg                                               <  2:1609075/100‑1 (MQ=255)
                                                    gTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAg                                               >  1:429958/1‑100 (MQ=255)
                                                    gTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAg                                               <  1:5980/100‑1 (MQ=255)
                                                      naaGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTa                                             >  1:1663287/2‑100 (MQ=255)
                                                       aaGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTAt                                            >  2:805329/1‑100 (MQ=255)
                                                         gTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTAttt                                          >  2:713639/1‑100 (MQ=255)
                                                          tGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTAtttt                                         <  1:1969962/100‑1 (MQ=255)
                                                           gCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTttc                                        >  1:201160/1‑100 (MQ=255)
                                                            cTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATTCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTttc                                        <  1:1853614/99‑1 (MQ=255)
                                                            cTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTttct                                       >  1:224144/1‑100 (MQ=255)
                                                             tGGCCCCATCGCCGTTTGACTAAGTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTttct                                       <  1:3597068/99‑1 (MQ=255)
                                                             tGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTttctt                                      >  1:2684938/1‑100 (MQ=255)
                                                             tGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTttctt                                      >  2:3698302/1‑100 (MQ=255)
                                                             tGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTttctt                                      >  1:40564/1‑100 (MQ=255)
                                                              ggCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCCCTCTATCAACTGAAAATTCAGTATTttcttc                                     >  1:2275452/1‑100 (MQ=255)
                                                              ggCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTttcttc                                     >  1:87313/1‑100 (MQ=255)
                                                              ggCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTttcttc                                     <  1:250164/100‑1 (MQ=255)
                                                              ggCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTttcttc                                     >  1:1702654/1‑100 (MQ=255)
                                                              ggCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTttcttc                                     <  2:1906927/100‑1 (MQ=255)
                                                              ggCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTttct                                       <  1:1016513/98‑1 (MQ=255)
                                                                ccccACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTcttctt                                   >  1:3012141/1‑100 (MQ=255)
                                                                ccccACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTcttctt                                   <  1:31607/100‑1 (MQ=255)
                                                                ccccACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGACACTCTATCAACTGAAAATTCAGTATTTTcttctt                                   >  1:3438009/1‑100 (MQ=255)
                                                                 cccACCGCCGTTTGACTACCTAATGCATCGTATGCCGGTTAAGGCGCGGTAGAGTCGCATCCGGCACTCTATCAACTGAAACTCCAGTACAttcttc                                     >  1:2333918/1‑97 (MQ=255)
                                                                 cccACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCttt                                  <  2:695237/100‑1 (MQ=255)
                                                                 cccACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCttt                                  >  2:1104551/1‑100 (MQ=255)
                                                                   cACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCttt                                  <  1:3507325/98‑1 (MQ=255)
                                                                    aCCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTcc                                <  1:1517293/99‑1 (MQ=255)
                                                                     ccgccgTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTc                              <  1:499540/100‑1 (MQ=255)
                                                                     ccgccgTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTc                              <  2:1024289/100‑1 (MQ=255)
                                                                     ccgccgTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTc                              <  1:2573487/100‑1 (MQ=255)
                                                                        ccgTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAg                           <  2:2535566/100‑1 (MQ=255)
                                                                             tGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGat                      <  1:148563/100‑1 (MQ=255)
                                                                              gACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGatt                     <  2:1370299/100‑1 (MQ=255)
                                                                               actaactaATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGatta                    <  2:2023738/100‑1 (MQ=255)
                                                                                ctaactaaTGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGattat                   <  1:1366295/100‑1 (MQ=255)
                                                                                     taaTGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGcc              <  1:1922314/100‑1 (MQ=255)
                                                                                      aaTGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATACAGTAATTTCTTCTGTCCTCAAGCTGATTATTAGCCt             >  1:2562579/1‑100 (MQ=255)
                                                                                       aTGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTg            <  2:755570/100‑1 (MQ=255)
                                                                                        tGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTgg           <  2:3401403/100‑1 (MQ=255)
                                                                                        tGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTgg           >  2:473752/1‑100 (MQ=255)
                                                                                        tGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTgg           >  1:2793906/1‑100 (MQ=255)
                                                                                        tGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTgg           <  2:2619107/100‑1 (MQ=255)
                                                                                         gCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGa          >  2:683134/1‑100 (MQ=255)
                                                                                         gCATCGTATGCCGGATAAGGCGCGGGAGCGTCGCATCCGGCACTCTATCAACGGAAAATTCAGTATTTTCTTCTTTCCGCAAGCTGATTATTAGCCTGGa          <  1:213531/100‑1 (MQ=255)
                                                                                             cGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATGTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATa       <  1:1436896/99‑1 (MQ=255)
                                                                                              gTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCgtacgatgcattagttagtcaaacggcggtggggccagcacttcacgattaccgttgtgcccct     <  1:1141359‑M2/100‑65 (MQ=255)
                                                                                              gTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATa       >  1:1976899/1‑98 (MQ=255)
                                                                                                aTGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCatacgatgcattagttagtcaaacgccggaggggccagcacttcacgattaccgttgtgcccctg    <  1:2410650‑M2/99‑66 (MQ=255)
                                                                                                aTGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATagaga   >  2:3204442/1‑100 (MQ=255)
                                                                                                 |                                                                                                   
GAACAGATGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAG  >  NC_000913/937130‑937326

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.