| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1062411 = | NA (NA) | 8 (0.060) | 5/166 | NT | NA | noncoding (5/134 nt) | REP91 (repetitive extragenic palindromic) element; contains 3 REP sequences | REP91 (repetitive extragenic palindromic) element; contains 3 REP sequences |
| ? | NC_000913 | 1062444 = | NA (NA) | noncoding (38/134 nt) | REP91 (repetitive extragenic palindromic) element; contains 3 REP sequences | REP91 (repetitive extragenic palindromic) element; contains 3 REP sequences | |||||
Only 100 of 153 total aligned reads displayed.
TGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTA > NC_000913/1062312‑1062510 | ttgccggatgcgatgacgcatcttaaccggtctacaaagattacagttcctgtgggccggataagacgttcacgccgcatccggcaactgcgccataatg < 1:1352893‑M1/1‑1 (MQ=255)ttgccggatgcgatgacgcatcttaaccggtctacaaagattacagttcctgtgggccggataagacgttcacgccgcatccggcaactgcgccataatg < 1:749675‑M1/1‑1 (MQ=255) tgccggatgcgatgacgcatcttaaccggtctacaaagattacagttcctgtgggccggataagacgttcacgccgcatccggcaactgcgccataatGc < 1:937206‑M1/2‑1 (MQ=255) tgccggatgcgatgacgcatcttaaccggtctacaaagattacagttcctgtgggccggataagacgttcacgccgcatccggcaactgcgccataatGc > 1:833048‑M1/99‑100 (MQ=255) gccggatgcgatgacgcatcttaaccggtctacaaagattacagttcctgtgggccggataagacgttcacgccgcatccggcaactgcgccataatGcc > 2:657004‑M1/98‑100 (MQ=255) cgtcAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCt > 2:44747/1‑100 (MQ=255) cgtcAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTCGTGCGcc > 1:1983061/1‑99 (MQ=255) gtcAGTATGACAGCTTTGGTTTGTACGCGGCACTAAGCCAGTTATTGCTGGTGTGAGTGGAGGGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTg < 1:3384691/100‑1 (MQ=255) cggatgcgatgacgcatcttaaccggtctacaaagattacagttcctgtgggccggataagacgttcacgccgcatccggcaactgcgccataatGCCTg > 2:430053‑M1/96‑100 (MQ=255) tATGACAGCTTTGGTTTTTAAGCGGAACTAAGCCAGTTATCGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATCACGTCGTTTGTGCGCCTGAAAAg < 1:3415913/100‑1 (MQ=255) aTGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGa > 1:2938117/1‑100 (MQ=255) tGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAg > 1:3221290/1‑98 (MQ=255) tGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGAc > 2:3158225/1‑100 (MQ=255) gACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGAcg > 1:3708334/1‑100 (MQ=255) gACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGAcg > 2:2235440/1‑100 (MQ=255) gACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGAcg < 2:176011/100‑1 (MQ=255) gACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGAcg < 2:507944/100‑1 (MQ=255) gACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGAcg > 2:1352898/1‑100 (MQ=255) cAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGAcgcg < 1:3386693/100‑1 (MQ=255) cAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGAcgcg > 1:1395778/1‑100 (MQ=255) gCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGtt > 2:2640698/1‑100 (MQ=255) cTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGttt > 2:2609485/1‑100 (MQ=255) cTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGttt > 2:3790691/1‑100 (MQ=255) cTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGttt > 1:2454148/1‑100 (MQ=255) cTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGttt > 2:223256/1‑100 (MQ=255) gTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGt > 1:3077337/1‑100 (MQ=255) gTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGt > 2:1523332/1‑100 (MQ=255) tttttACGCGGAACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACAACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGt < 1:1165288/99‑1 (MQ=255) ttttACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCg < 2:1825263/100‑1 (MQ=255) ttttACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCg > 2:1778046/1‑100 (MQ=255) tttACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGc < 1:197946/100‑1 (MQ=255) cgcgGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGGCCACCAAAACAGATAACGTCGTTGGTGCGCCTGAAAAGACGCGTTTAGCGTCGCAt > 1:1573969/1‑98 (MQ=255) cgcgGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCa < 2:731776/100‑1 (MQ=255) cgcgCCACTGCGCCAGTTAATGCACGCGTTAGTGGAGTGCGACCACCAAAACAGATAACGCCGATGGTGCGCCCGAGAAGAAGCGTTTGGCGTCGCATCa > 1:2620139/1‑100 (MQ=255) gcgGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAg < 2:2050537/100‑1 (MQ=255) gCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCa < 1:1939157/100‑1 (MQ=255) cACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGGGCGCCTGAAAAGACGCGTGTAGCGCCGCCTCAGGc > 1:3285722/1‑98 (MQ=255) aaagattacagttcctgtgggccggataagacgttcacgccgcatccggcaactgcgccataatGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCAtt > 1:396260‑M1/65‑100 (MQ=255) cTAAGCCAGTTAGTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTa > 2:2505182/1‑100 (MQ=255) aagattacagttcctgtgggccggataagacgttcacgccgcatccggcaactgcgccataatGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTa > 1:641357‑M1/64‑100 (MQ=255) aaGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATg > 2:1869502/1‑100 (MQ=255) aaGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATg < 2:189836/100‑1 (MQ=255) gCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATATCGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGgc < 1:1560305/100‑1 (MQ=255) tacagttcctgtgggccggataagacgttcacgccgcatccggcaactgcgccataatGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGgcg > 1:1342205‑M1/59‑100 (MQ=255) tacagttcctgtgggccggataagacgttcacgccgcatccggcaactgcgccataatGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGgcg > 2:1471931‑M1/59‑100 (MQ=255) ccAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGgcg < 1:2853063/100‑1 (MQ=255) cAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGgcgc > 2:611618/1‑100 (MQ=255) gTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAg > 2:3410211/1‑100 (MQ=255) tGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGcc < 2:2743272/100‑1 (MQ=255) gCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCg < 2:1448771/100‑1 (MQ=255) cTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTAGGGCGCAGTTGCCgg < 1:2857213/100‑1 (MQ=255) tGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCgg > 1:2829118/1‑99 (MQ=255) tgtTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATgc > 2:23889/1‑100 (MQ=255) tgtTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATgc > 2:782070/1‑100 (MQ=255) ttAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATgcgg < 2:1976357/100‑1 (MQ=255) tAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATgcggc > 2:2832423/1‑100 (MQ=255) aGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATgcggcg < 1:3580978/100‑1 (MQ=255) gTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGt < 2:2830757/100‑1 (MQ=255) gTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACg < 1:611614/100‑1 (MQ=255) gTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACg < 2:2982243/100‑1 (MQ=255) gTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACg < 2:1341224/100‑1 (MQ=255) tGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGt < 2:3330311/100‑1 (MQ=255) gCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTc < 2:3772828/100‑1 (MQ=255) gCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTc > 2:2708552/1‑100 (MQ=255) cGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCt > 2:3111257/1‑100 (MQ=255) cGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCt < 2:2111154/100‑1 (MQ=255) cGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCt > 2:1176237/1‑100 (MQ=255) gACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCtn < 1:2817084/100‑2 (MQ=255) ccaccaAAACAGATAACGTCGTTTGTGCGCCTGACACGACGCGCTTAGCGTCGCATCAGGCAGTCTGGCACAGCTGACGGATGCGGCGTGAGCGTCTGAt > 1:3419908/1‑100 (MQ=21) ccaccaAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTAt > 1:1426426/1‑100 (MQ=255) caccaAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTTCCGGATGCGGCGTGAACGTCTTATc > 2:3637282/1‑100 (MQ=255) accaAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATcc > 1:925303/1‑100 (MQ=255) ccaAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCg < 2:760797/100‑1 (MQ=255) aaaaCAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGc < 2:1973853/100‑1 (MQ=255) aaaaCAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGc > 2:1919793/1‑100 (MQ=255) aaaaCAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGc < 2:2089647/100‑1 (MQ=255) aaaaCAGATAACGGCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGc < 2:2883093/100‑1 (MQ=255) aaCAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGccc < 2:1662343/100‑1 (MQ=255) aaCAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGccc < 1:3523825/100‑1 (MQ=255) aaCAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGccc < 2:3578477/100‑1 (MQ=255) aCAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCTGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGccc < 2:533987/99‑1 (MQ=255) cAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCcac < 2:1732291/100‑1 (MQ=255) aGATATCGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTTAACGTCTTATCCGGcacaca < 1:1003969/100‑1 (MQ=255) aTAGCGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAgg < 1:1171222/100‑1 (MQ=255) aTAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAgg < 2:1217977/100‑1 (MQ=255) aTAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAgg < 2:306311/100‑1 (MQ=255) aaCGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGaa < 2:3240937/100‑1 (MQ=255) aCGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAAc < 1:1014428/100‑1 (MQ=255) aCGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAAc > 2:211613/1‑100 (MQ=255) cgtcgtTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCAGCGTGAACGTCTTATCCAGCCCACAGGAACt < 2:2554428/100‑1 (MQ=255) gtcgtTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGTCGTGAACGTCTTATCCGTCCCACAGGAACTg < 2:2557180/100‑1 (MQ=255) gtcgtTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTg < 2:2471005/100‑1 (MQ=255) cgtTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTa > 2:3688990/1‑100 (MQ=255) cgtTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTa > 2:1566001/1‑100 (MQ=255) gtgCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCtt < 1:2639868/100‑1 (MQ=255) gtgCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCtt < 1:213501/100‑1 (MQ=255) gcgcCTGAAAAGTCGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCttt < 1:1871792/99‑1 (MQ=255) cgcCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGt < 2:1384235/100‑1 (MQ=255) GCCTGAAAAGACGCGTTTGGCGTCGGATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCTCAGGAACTGTAATCTTTGTa > 1:2319853‑M1/1‑100 (MQ=255) GCCTGAAAAGACGCGTTTAGCGTCGCATCAGTCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGt > 1:505938‑M1/1‑99 (MQ=255) | TGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAACGTCGTTTGTGCGCCTGAAAAGACGCGTTTAGCGTCGCATCAGGCATTATGGCGCAGTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCCACAGGAACTGTAATCTTTGTA > NC_000913/1062312‑1062510 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |