New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3214896 =NA (NA)9 (0.070) 6/168 NT NA noncoding (5/33 nt) REP227 (repetitive extragenic palindromic) element; contains 1 REP sequences REP227 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 3214925 = NA (NA)intergenic (+37/+42) rpoD/mug RNA polymerase, sigma 70 (sigma D) factor/G/U mismatch‑specific DNA glycosylase; xanthine DNA glycosylase

Only 100 of 199 total aligned reads displayed.

GCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAGTTTC  >  NC_000913/3214826‑3215024
                                                                                                   |                                                                                                   
 caggcgctggtagtgcgtgggcgataaaaaacgccaccgaaaaggtggcgtttgtgcagagggcctagtGCCGGATCAGGCGTTACGCCGCACCCGGCAc                                                                                                    >  2:2854178‑M1/70‑100 (MQ=255)
  gcTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATAGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACt                                                                                                   <  2:1729743/100‑1 (MQ=255)
    tGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAg                                                                                                 >  1:2158124/1‑100 (MQ=255)
    ngcgcAAACTGCATCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAg                                                                                                 >  1:2710666/2‑100 (MQ=255)
     cgctggtagtgcgtgggcgataaaaaacgccaccgaaaaggtggcgtttgtgcagagggcctagtGCCGGATCAGGCGTTACGCCGCACCCGGCACTAgg                                                                                                >  1:2802426‑M1/66‑100 (MQ=255)
      cgcAACCTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGc                                                                                               <  1:1281833/100‑1 (MQ=255)
      cgcAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGc                                                                                               <  1:2889764/100‑1 (MQ=255)
      cgcAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGc                                                                                               <  2:1622362/100‑1 (MQ=255)
      cgcAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGc                                                                                               <  1:741643/100‑1 (MQ=255)
        cAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGccc                                                                                             <  2:720152/100‑1 (MQ=255)
            cTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTg                                                                                         <  1:1176362/100‑1 (MQ=255)
            cTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTg                                                                                         >  1:317088/1‑100 (MQ=255)
            cTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTg                                                                                         <  2:2010696/100‑1 (MQ=255)
            cTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTg                                                                                         >  2:889397/1‑100 (MQ=255)
             tGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGc                                                                                        <  1:3192137/100‑1 (MQ=255)
              gCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGca                                                                                       <  1:3303548/100‑1 (MQ=255)
               cGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGcac                                                                                      <  2:734997/100‑1 (MQ=255)
               cGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGcac                                                                                      <  1:2740433/100‑1 (MQ=255)
                  cACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACaaa                                                                                   >  2:1689629/1‑100 (MQ=255)
                   aCCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAAc                                                                                  >  1:3685387/1‑100 (MQ=255)
                    cccGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAAcn                                                                                 <  1:3701905/100‑2 (MQ=255)
                    cccGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACg                                                                                 >  1:892549/1‑100 (MQ=255)
                    cccGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACg                                                                                 <  2:1334054/100‑1 (MQ=255)
                    cccGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACg                                                                                 <  1:1652646/100‑1 (MQ=255)
                    cccGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACg                                                                                 <  1:1932354/100‑1 (MQ=255)
                     ccGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGc                                                                                >  2:1632315/1‑100 (MQ=255)
                      cGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGcc                                                                               <  1:510722/100‑1 (MQ=255)
                       gAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCa                                                                              >  2:206486/1‑100 (MQ=255)
                            gTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCttt                                                                         >  2:1710956/1‑100 (MQ=255)
                              tCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTc                                                                       <  2:2872072/100‑1 (MQ=255)
                              tCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGACCCTCTGCACAAACGCCACCTTTTc                                                                       <  1:1299795/100‑1 (MQ=255)
                               cTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCg                                                                      >  1:796656/1‑100 (MQ=255)
                                tGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGAAGTTACACCGCACCCGGAGCTAGGCCCTCTGCACAAACGCCa                                                                              >  1:3346151/1‑91 (MQ=255)
                                 gAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGt                                                                    >  2:2392290/1‑100 (MQ=255)
                                 gAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGt                                                                    >  2:1151767/1‑100 (MQ=255)
                                  aaGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACACGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTg                                                                   <  2:372465/100‑1 (MQ=255)
                                    gTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTgg                                                                  <  1:106128/99‑1 (MQ=255)
                                       ctgcGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGtt                                                              <  2:585025/100‑1 (MQ=255)
                                       ctgcGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGtt                                                              >  2:1384986/1‑100 (MQ=255)
                                       ctgcGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGtt                                                              >  1:1470198/1‑100 (MQ=255)
                                            tAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTa                                                         <  2:1257608/100‑1 (MQ=255)
                                             aGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTAt                                                        <  1:1659392/100‑1 (MQ=255)
                                             aGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTAt                                                        <  2:1313412/100‑1 (MQ=255)
                                              gCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATc                                                       >  1:3529403/1‑100 (MQ=255)
                                              gCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATc                                                       >  2:1605061/1‑100 (MQ=255)
                                                ttCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGc                                                     <  1:3758598/100‑1 (MQ=255)
                                                 tCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGcc                                                    <  2:2125885/100‑1 (MQ=255)
                                                 tCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGcc                                                    <  2:1560550/100‑1 (MQ=255)
                                                   cTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCa                                                  >  1:1904090/1‑100 (MQ=255)
                                                   cTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCa                                                  >  2:352276/1‑100 (MQ=255)
                                                     ggACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCAc                                                 >  2:2550083/1‑99 (MQ=255)
                                                     ggACGATAAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACg                                                >  2:3493282/1‑100 (MQ=255)
                                                      gACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGc                                               >  2:2104888/1‑100 (MQ=255)
                                                       aCGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCa                                              <  1:3719863/100‑1 (MQ=255)
                                                       aCGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCa                                              <  1:1556077/100‑1 (MQ=255)
                                                       aCGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCa                                              <  2:324327/100‑1 (MQ=255)
                                                        cGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCAc                                             >  2:616749/1‑100 (MQ=255)
                                                         gATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACt                                            <  1:1380626/100‑1 (MQ=255)
                                                         gATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACt                                            >  2:762022/1‑100 (MQ=255)
                                                           ttAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTAc                                          >  2:1341367/1‑100 (MQ=255)
                                                            tAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTAcc                                         <  1:1769867/100‑1 (MQ=255)
                                                             aaTCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCa                                        >  2:2609102/1‑100 (MQ=255)
                                                              aTCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAg                                       >  2:1197900/1‑100 (MQ=255)
                                                                cGGTAGGCCGGATGAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAgcg                                     >  2:2557467/1‑100 (MQ=255)
                                                                cGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAgc                                      >  2:2793677/1‑99 (MQ=255)
                                                                 ggTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAgcgc                                    >  2:876755/1‑100 (MQ=255)
                                                                  tagtgccgggtgcggcgtaacgcctgatccggcACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCGCGCACTACCAGCGcc                                   >  2:3749995‑M2/34‑100 (MQ=255)
                                                                  tagtgccgggtgcggcgtaacgcctgatccggcACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGcc                                   >  2:2471858‑M2/34‑100 (MQ=255)
                                                                     tgccgggtgcggcgtaacgcctgatccggcACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTg                                 >  1:1486831‑M2/31‑99 (MQ=255)
                                                                     ggCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTgg                                >  2:434840/1‑100 (MQ=255)
                                                                     ggCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTgg                                <  2:3014021/100‑1 (MQ=255)
                                                                      gccgggtgcggcgtaacgcctgatccggcACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGt                               >  2:3405130‑M2/30‑100 (MQ=255)
                                                                      GCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGt                               <  2:563530‑M1/100‑1 (MQ=255)
                                                                      GCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGt                               <  2:2960423‑M1/100‑1 (MQ=255)
                                                                       CCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTc                              <  2:1423088‑M1/100‑1 (MQ=255)
                                                                        CGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTcc                             <  2:3626252‑M1/100‑1 (MQ=255)
                                                                           aTCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGc                          <  2:284617/100‑1 (MQ=255)
                                                                              aGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTcg                       >  2:986783/1‑100 (MQ=255)
                                                                               ggCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCTGCTtgc                      >  1:3576503/1‑100 (MQ=255)
                                                                               ggCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTcgc                      <  2:1890874/100‑1 (MQ=255)
                                                                               ggCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTcgc                      >  2:902603/1‑100 (MQ=255)
                                                                               ggCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTcgc                      >  2:427271/1‑100 (MQ=255)
                                                                               ggCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTcgc                      >  1:3235916/1‑100 (MQ=255)
                                                                                gCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCAGCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTcgcg                     <  1:2431767/100‑1 (MQ=255)
                                                                                 cGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGTCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGa                    <  1:2775527/100‑1 (MQ=255)
                                                                                  gTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGAt                   <  1:230009/100‑1 (MQ=255)
                                                                                  gTTACGCCGCACCCGGCAATAGGCCCTCTGCACAAACGCCACCTTCTCGGTGGCGTTTTTTATCGCCCACGCACTCCCAGCGCCTGGTCCAGCTCGCGAt                   >  1:1682774/1‑100 (MQ=255)
                                                                                   ttACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCGCGCGATa                  <  1:672137/100‑1 (MQ=255)
                                                                                      cgccgcACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGc               >  2:1452621/1‑100 (MQ=255)
                                                                                      cgccgcACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGc               >  2:3689005/1‑100 (MQ=255)
                                                                                       gccgcACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCt              <  1:3664474/100‑1 (MQ=255)
                                                                                         cgcACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTc            <  1:2574680/100‑1 (MQ=255)
                                                                                           cACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCaa          <  1:1250017/100‑1 (MQ=255)
                                                                                             cccGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAAcc        <  1:206484/100‑1 (MQ=255)
                                                                                               cggcACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCCCTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAg      >  1:427184‑M2/5‑100 (MQ=255)
                                                                                                gggaCTAGGCCCGCTGCACAACCGCCACCTTTGCGGGGGCGTTTTTTATCGCCCACGCACTAGCTGCGCCTGGTCCAGCTCGCGATACGCTTCAAcc        <  1:2947997/94‑1 (MQ=255)
                                                                                                ggcACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGTGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAGt     >  2:474571‑M2/4‑100 (MQ=255)
                                                                                                 gcACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAGtt    <  2:635818‑M2/98‑1 (MQ=255)
                                                                                                   aCTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCGACCAGTTtc  <  1:192415/100‑1 (MQ=255)
                                                                                                   aCTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAGTTtc  <  1:2007001/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAGTTTC  >  NC_000913/3214826‑3215024

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.