BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3910443 =	NA (NA)	6 (0.050)	5/168	NT	NA	noncoding (1/35 nt)	REP284 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP284 (repetitive extragenic palindromic) element; contains 1 REP sequences
*	?	NC_000913	3910474 =	NA (NA)	6 (0.050)	5/168	NT	NA	noncoding (32/35 nt)	REP284 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP284 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 182 total aligned reads displayed.

AAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGCTGGCGT  >  NC_000913/3910375‑3910573

gttcgcgctgcgtggaagaccaatattaaagacagtagcggtaagccgctgtactaataaaactccagGCCGGATGCGGCGTAAAACACCGTACCCGGcc                                                                                                     >  2:3240343‑M1/69‑100 (MQ=255)

aaaaGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTCTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGcc                                                                                                     >  1:3233409/1‑100 (MQ=255)

 ttcgcgctgcgtggaagaccaatattaaagacagtagcggtaagccgctgtactaataaaactccagGCCGGATGCGGCGTAAAACACCGTACCCGGcc                                                                                                     >  1:579421‑M1/68‑99 (MQ=255)

  aaGCAGGCTTGGTTGCAGCCATAATTTACTCTTCAGTTAAACGCGTTTACAAAGGCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTg                                                                                                   <  1:110321/100‑1 (MQ=255)

  aaGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAACGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTg                                                                                                   >  2:3317746/1‑100 (MQ=255)

   aGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTgg                                                                                                  >  1:3453952/1‑100 (MQ=255)

   aGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTgg                                                                                                  >  2:1264902/1‑100 (MQ=255)

   aGCAGGCTTGGTTGCAGACATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTgg                                                                                                  <  1:1782846/100‑1 (MQ=255)

    gCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGa                                                                                                 <  1:2332369/100‑1 (MQ=255)

    gCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGa                                                                                                 <  2:2640500/100‑1 (MQ=255)

     cgctgcgtggaagaccaatattaaagacagtagcggtaagccgctgtactaataaaactccagGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAg                                                                                                >  1:1956686‑M1/64‑100 (MQ=255)

     cAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAg                                                                                                <  1:3311390/100‑1 (MQ=255)

     cAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAg                                                                                                >  1:2484863/1‑100 (MQ=255)

         cTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGtttt                                                                                            <  2:3327452/100‑1 (MQ=255)

          ttGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTtta                                                                                           <  2:2088584/100‑1 (MQ=255)

          ttGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTtta                                                                                           <  1:909868/100‑1 (MQ=255)

          ttGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTtta                                                                                           <  1:2233842/100‑1 (MQ=255)

          ttGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCATGGAGTTtta                                                                                           >  1:782259/1‑100 (MQ=255)

           tGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttat                                                                                          <  2:2380195/100‑1 (MQ=255)

            ggTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatt                                                                                         <  2:2989894/100‑1 (MQ=255)

            ggTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatt                                                                                         <  2:2946481/100‑1 (MQ=255)

            ggTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatt                                                                                         <  1:1051737/100‑1 (MQ=255)

            ggTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGGTTACTAAGTCATTTTGTAGTGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatt                                                                                         <  1:611516/100‑1 (MQ=255)

             gTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatta                                                                                        >  2:2838116/1‑100 (MQ=255)

              ttGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAg                                                                                       <  2:651558/100‑1 (MQ=255)

              tcgCAGCCATAAGTTACTCCTCAGTTAATCGCGTTTACAAACTCATTTTGTAAGGCCGGATGCGGCGTCAAACTCCGCACCCGGCCTGTAGTTttatt                                                                                         <  1:2433548/96‑1 (MQ=255)

               tGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGt                                                                                      >  2:1254783/1‑100 (MQ=255)

               tGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGt                                                                                      <  2:58640/100‑1 (MQ=255)

                gCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTa                                                                                     >  2:2082248/1‑100 (MQ=255)

                gCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTa                                                                                     <  1:699695/100‑1 (MQ=255)

                gCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGACCTGGAGTTTTATTAGTa                                                                                     <  2:1317001/100‑1 (MQ=255)

                   gCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAg                                                                                  >  2:1343599/1‑100 (MQ=255)

                    ccATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGc                                                                                 >  1:337596/1‑100 (MQ=255)

                     cATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACCGc                                                                                 <  1:3442398/99‑1 (MQ=255)

                     cATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCg                                                                                <  2:752891/100‑1 (MQ=255)

                      aTAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCgg                                                                               <  1:378355/100‑1 (MQ=255)

                       tAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGc                                                                              >  2:3054776/1‑100 (MQ=255)

                        aaGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCt                                                                             <  1:251481/100‑1 (MQ=255)

                          gTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTa                                                                           >  2:2212722/1‑100 (MQ=255)

                           ttACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTAc                                                                          <  2:3509988/100‑1 (MQ=255)

                              ctctTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGc                                                                       <  2:504572/100‑1 (MQ=255)

                                nttCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTa                                                                     >  2:1750724/2‑100 (MQ=255)

                                ctTCAGTTAAACGCGTTTACAAAGTCATTTTGTACTGCCAGATGCGGCTTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTa                                                                     >  1:1533361/1‑100 (MQ=255)

                                ctTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTa                                                                     >  2:3341185/1‑100 (MQ=255)

                                    cgTTAAACGCGTTTACATAGTCATTTTGTATTGCCGGATGCGGCGTAAAACACCATACGCTGCCTGGAGTTTTATTAGTAAAGCCGCTTACCGCTAc                                                                    >  1:3259950/2‑97 (MQ=255)

                                     gTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTc                                                                <  1:2364721/100‑1 (MQ=255)

                                        aaaCGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCttt                                                             <  2:3198452/100‑1 (MQ=255)

                                         aaCGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCttt                                                             <  1:2875050/99‑1 (MQ=255)

                                         aaCGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTa                                                            <  1:342130/100‑1 (MQ=255)

                                           cgcgTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAat                                                          <  1:2101732/100‑1 (MQ=255)

                                           cgcgTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAat                                                          >  2:2656453/1‑100 (MQ=255)

                                           cgcgTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAat                                                          >  1:2004150/1‑100 (MQ=255)

                                           cgcgTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAat                                                          >  2:200550/1‑100 (MQ=255)

                                           cgcgTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAat                                                          <  2:3406895/100‑1 (MQ=255)

                                           cgcgTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAat                                                          <  2:3786974/100‑1 (MQ=255)

                                             cgTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAatat                                                        >  1:3320967/1‑100 (MQ=255)

                                               tttACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTg                                                      >  2:351121/1‑100 (MQ=255)

                                               tttACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTg                                                      >  2:29852/1‑100 (MQ=255)

                                               tttACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTg                                                      <  1:3094386/100‑1 (MQ=255)

                                               tttACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTg                                                      >  1:2993291/1‑100 (MQ=255)

                                                ttACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTgg                                                     <  1:1461927/100‑1 (MQ=255)

                                                ttACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTgg                                                     <  2:1332880/100‑1 (MQ=255)

                                                tgaCAAAGTCATTTTGTAATGCCGGATGGTGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTg                                                      <  1:1177431/97‑1 (MQ=255)

                                                 tACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTCCCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTg                                                      >  1:68443/1‑98 (MQ=255)

                                                 tACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGt                                                    >  1:1837788/1‑100 (MQ=255)

                                                 tACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGt                                                    >  2:91056/1‑100 (MQ=255)

                                                   cAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCt                                                  >  2:1673782/1‑100 (MQ=255)

                                                      aGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTcc                                               <  1:1344558/100‑1 (MQ=255)

                                                       gTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCa                                              >  2:3260124/1‑100 (MQ=255)

                                                        tCATTTTGTAATGGCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCAc                                             <  1:1542320/100‑1 (MQ=255)

                                                        tCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCAc                                             <  1:2447822/100‑1 (MQ=255)

                                                         cATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACg                                            <  1:996013/100‑1 (MQ=255)

                                                          aTTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGc                                           <  2:3397904/100‑1 (MQ=255)

                                                          aTTTTGTAATGCCGGATGCGGAGTAAAACACCATACCAGGGCTGGAGTTTTATTAGTACAAAGTCTTACCGCTACTGTCTTTAATATTGTTCTTCAACGc                                           >  1:3690176/1‑100 (MQ=255)

                                                                ccaggccgggtacggtgttttacgccgcatccggcCTGGAGTTTTATTATTTTATCTTCTTACCGCTACTGTCTTTAATATTTGTCTTCCACGCAgcgc                                      >  1:1544956‑M2/36‑99 (MQ=255)

                                                                    GCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAAcc                                 >  2:185743‑M1/1‑100 (MQ=255)

                                                                    GCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAAcc                                 >  2:715075‑M1/1‑100 (MQ=255)

                                                                    GCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAAcc                                 >  1:1122567‑M1/1‑100 (MQ=255)

                                                                    GCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAAcc                                 >  2:1612295‑M1/1‑100 (MQ=255)

                                                                    GCCGGATGCGGCGTAAAACACCGGAGCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAAcc                                 >  1:1011511‑M1/1‑100 (MQ=255)

                                                                    GCCGGATGCAGCGTAAAACACCGGACCCGGGCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAAcc                                 >  1:3537720‑M1/1‑100 (MQ=255)

                                                                     CCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCt                                <  1:440254‑M1/100‑1 (MQ=255)

                                                                       gggtacggtgttttacgccgcatccggcCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGt                              >  1:1582860‑M2/29‑100 (MQ=255)

                                                                              gcgTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACt                        >  1:2154854/1‑99 (MQ=255)

                                                                               cgTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTac                      >  2:1908448/1‑100 (MQ=255)

                                                                                gTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTaca                     <  2:247859/100‑1 (MQ=255)

                                                                                     acacCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATc                <  1:1343594/100‑1 (MQ=255)

                                                                                      cacCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATcc               >  1:38337/1‑100 (MQ=255)

                                                                                         cGTACCCGGCCTGGAGTTTTATTGGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGc            >  1:1583712/1‑100 (MQ=255)

                                                                                           tACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAg          <  1:2683663/100‑1 (MQ=255)

                                                                                             cccGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGc        >  2:3640155/1‑100 (MQ=255)

                                                                                             cccGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGc        >  2:3645380/1‑100 (MQ=255)

                                                                                             cccGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGc        <  2:1800330/100‑1 (MQ=255)

                                                                                             cccGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGc        >  1:3513626/1‑100 (MQ=255)

                                                                                              ccggcCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGc        >  2:1695702‑M2/6‑99 (MQ=255)

                                                                                               cggcCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGCTg      <  1:2932758‑M2/96‑1 (MQ=255)

                                                                                                ggcCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGCTgg     <  2:841671‑M2/97‑1 (MQ=255)

                                                                                                  cCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGCTGGCg   <  1:3368343‑M2/99‑1 (MQ=255)

                                                                                                   cTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGCTGGCGt  >  2:2738759/1‑100 (MQ=255)

                                                                                                   cTGGAGTCTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGCt       <  1:3559101/95‑1 (MQ=255)

AAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGCTGGCGT  >  NC_000913/3910375‑3910573

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.