BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4235376 =	NA (NA)	7 (0.060)	5/156	NT	NA	coding (1619/1650 nt)	pgi	glucosephosphate isomerase
*	?	NC_000913	4235411 =	NA (NA)	7 (0.060)	5/156	NT	NA	intergenic (+4/‑495)	pgi/yjbE	glucosephosphate isomerase/extracellular polysaccharide production threonine‑rich protein

Only 100 of 206 total aligned reads displayed.

GTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGA  >  NC_000913/4235313‑4235510

gTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAatcatc                                                                                                    >  2:1061559/1‑100 (MQ=255)

   ttCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCAtcgtc                                                                                                 >  2:1409498/1‑100 (MQ=255)

   ttCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCAtcgtc                                                                                                 >  2:1748871/1‑100 (MQ=255)

    tctcCCAGAGCTGAAAGATGAGAAAGAAAGCAGCAGCCACGATAGCGCGACTAATGGTCTGATTAACTGCTATAAAGCGTGGCGCGGTTAAGCAtcgtct                                                                                                <  1:3159235/100‑2 (MQ=255)

     cTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGa                                                                                               >  1:991092/1‑100 (MQ=255)

     cTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGa                                                                                               >  2:1924241/1‑100 (MQ=255)

     cTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGa                                                                                               <  1:3207672/100‑1 (MQ=255)

       gCCAGATCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGata                                                                                             <  1:2739298/100‑1 (MQ=255)

       gCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGata                                                                                             >  2:1559348/1‑100 (MQ=255)

       gCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGata                                                                                             >  1:3490496/1‑100 (MQ=255)

       gCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGata                                                                                             <  2:444617/100‑1 (MQ=255)

       gCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGata                                                                                             >  1:2167912/1‑100 (MQ=255)

       gCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCCACCAATGGTCTGACTAACCGCTATAAAGCGTGGTGCGGCTAATCATCATCGata                                                                                             >  1:3469434/1‑100 (MQ=255)

        ccAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGatat                                                                                            >  2:1352483/1‑100 (MQ=255)

         cAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATg                                                                                           >  1:3039215/1‑100 (MQ=255)

          agagCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGt                                                                                          <  1:542971/100‑1 (MQ=255)

           gagCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTa                                                                                         <  2:1110878/100‑1 (MQ=255)

           gagCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTa                                                                                         <  1:2364084/100‑1 (MQ=255)

             gCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAATCGTGGCGCGGTTAATCATCGTCGATATGTAgg                                                                                       <  2:3603581/100‑1 (MQ=255)

                gAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCg                                                                                    >  2:785466/1‑100 (MQ=255)

                 aaaGATGATAAAGAAATCAGCAGCCACGATAGATCGACCAATGGTCTGATTAACCGCTATAACGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCgg                                                                                   <  2:2653175/100‑1 (MQ=255)

                  aaGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGa                                                                                  >  2:2200739/1‑100 (MQ=255)

                  aaGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGa                                                                                  >  2:3252025/1‑100 (MQ=255)

                   aGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGAt                                                                                 >  1:1030009/1‑100 (MQ=255)

                   aGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGAt                                                                                 <  2:183590/100‑1 (MQ=255)

                   aGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGAt                                                                                 <  2:2863432/100‑1 (MQ=255)

                     atgatAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATaa                                                                               <  1:1988618/100‑1 (MQ=255)

                      tgatAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAg                                                                              <  2:2898510/100‑1 (MQ=255)

                       gatAAAGAAATCAGCAGCCACGATAGCTCGACCAATGCTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAgg                                                                             >  1:2037694/1‑100 (MQ=255)

                           aagaagGCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGGCGATATGTAGGCCGGATAAGGCg                                                                           >  1:2261863/1‑98 (MQ=255)

                           aaGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGtt                                                                         >  1:1905064/1‑100 (MQ=255)

                           aaGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGt                                                                          >  2:969694/1‑99 (MQ=255)

                            aGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTc                                                                        <  2:3277710/100‑1 (MQ=255)

                            aGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTc                                                                        >  1:175799/1‑100 (MQ=255)

                            aGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTc                                                                        <  1:2307465/100‑1 (MQ=255)

                             gAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCa                                                                       <  1:3601118/100‑1 (MQ=255)

                              aaaTCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAc                                                                      >  2:1766329/1‑100 (MQ=255)

                               aaTCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAcg                                                                     >  1:1454103/1‑100 (MQ=255)

                                aTCAGCAGCCACGATAGCGCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAcgc                                                                    <  1:1464399/100‑1 (MQ=255)

                                  cagcagCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAcgccg                                                                  <  2:1431445/100‑1 (MQ=255)

                                       gcCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAcgccg                                                                  <  1:2462092/95‑1 (MQ=255)

                                       gcCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATcc                                                             >  2:3527737/1‑100 (MQ=255)

                                       gcCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATcc                                                             <  1:2868614/100‑1 (MQ=255)

                                       gcCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATcc                                                             >  1:1827928/1‑100 (MQ=255)

                                         cACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCgg                                                           <  1:1558304/100‑1 (MQ=255)

                                          aCGATAGCTCGACGAATGGTCTGATTAACCGCTATAAAGCGGGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATGCGGCGTGAACGCCTTATcc                                                             <  1:1529860/97‑1 (MQ=37)

                                          aCGATAGCTCGACCAATTGTCTGATTAACCGCTATAAAGCGTGCCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGc                                                          <  1:2433824/100‑1 (MQ=255)

                                          aCGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGc                                                          <  1:3730714/100‑1 (MQ=255)

                                          aCGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGc                                                          <  2:3031681/100‑1 (MQ=255)

                                            gATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCaa                                                        >  2:2998750/1‑100 (MQ=255)

                                             aTAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAc                                                       <  2:2924888/100‑1 (MQ=255)

                                                gCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGa                                                    <  1:2826149/100‑1 (MQ=255)

                                                 cTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGAt                                                   >  1:2953882/1‑100 (MQ=255)

                                                   cGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGc                                                 <  1:329226/100‑1 (MQ=255)

                                                   cGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGGTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGc                                                 >  2:2697373/1‑100 (MQ=255)

                                                    ggccAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGcc                                                <  1:1129354/98‑1 (MQ=255)

                                                      ccAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTg                                              >  2:1292196/1‑100 (MQ=255)

                                                          tGGTCTGATTAGCCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGc                                          <  2:2441757/100‑1 (MQ=255)

                                                          gacgatgattaaccgcgccacgctttatagcggttaatcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGc                                          >  2:970028‑M2/41‑100 (MQ=255)

                                                           ggTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCg                                         >  2:9371/1‑100 (MQ=255)

                                                           ggTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCg                                         >  2:3739199/1‑100 (MQ=255)

                                                            gTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATgaga                                        >  1:860931/1‑100 (MQ=255)

                                                            gTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAAGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGa                                        >  1:242574/1‑100 (MQ=255)

                                                              cTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAcg                                      <  2:1585730/100‑1 (MQ=255)

                                                              cTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAc                                       >  1:747207/1‑99 (MQ=255)

                                                              atgattaaccgcgccacgctttatagcggttaatcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAcg                                      >  1:1560260‑M2/37‑100 (MQ=255)

                                                               TGATTAACCGCTATAACGCGTGGCGCGGTTAATCATCGTCGATATGTCGGCCGGATCAGGCCTTCACGCCGCAGCCGGCAACCGATGCCTTATGCGAcgc                                     >  1:3586234‑M1/1‑100 (MQ=255)

                                                               TGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAcgc                                     <  2:3220774‑M1/100‑1 (MQ=255)

                                                               TGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAcgc                                     <  1:735617‑M1/100‑1 (MQ=255)

                                                                GATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAcgcg                                    <  2:2275475‑M1/100‑1 (MQ=255)

                                                                 attaaccgcgccacgctttatagcggttaatcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCgg                                   >  2:720820‑M2/34‑100 (MQ=255)

                                                                 ATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCgg                                   <  2:3330609‑M1/100‑1 (MQ=255)

                                                                    AACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTcg                                <  1:3742886‑M1/100‑1 (MQ=255)

                                                                    AACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTcg                                >  1:1134740‑M1/1‑100 (MQ=255)

                                                                     ACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTcgc                               <  2:1992322‑M1/100‑1 (MQ=255)

                                                                        GCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTc                            >  2:1222393‑M1/1‑100 (MQ=255)

                                                                        GCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTc                            >  2:2756338‑M1/1‑100 (MQ=255)

                                                                         CTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCt                           >  1:2572729‑M1/1‑100 (MQ=255)

                                                                         CTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCt                           >  1:3376009‑M1/1‑100 (MQ=255)

                                                                         CTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCt                           <  1:1048688‑M1/100‑1 (MQ=255)

                                                                         CTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCt                           >  2:231663‑M1/1‑100 (MQ=255)

                                                                           ataAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTa                         >  2:1252428/1‑100 (MQ=255)

                                                                             aaaGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATc                       <  2:1158743/100‑1 (MQ=255)

                                                                                gCGGGGCGCGGTTAATCATCGTCGAGATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAgg                    <  1:604229/100‑1 (MQ=255)

                                                                                 cGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATAAGACGCGACCGCGTCGCATCAGGc                   <  1:3777381/100‑1 (MQ=21)

                                                                                  gTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGcc                  <  1:454054/100‑1 (MQ=255)

                                                                                  gTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACCCGGTCGCGTCTTATCAGGcc                  <  2:3577977/100‑1 (MQ=255)

                                                                                  gTGGCGCGGTTAATCATCGTCGATATGTAGCCCGGATAAGGCGTTCACGCCGCATCCGCCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGcc                  <  2:3793188/100‑1 (MQ=255)

                                                                                   tGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCAAGCCGCATCCGGCAACCGATGCCTGAGAAGACGCGACCGCGTCGCATCAGGcat                 <  2:132568/100‑3 (MQ=21)

                                                                                    ggCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATAAGACGCGACCGCGTCGCATCAGGcatc                <  2:2364127/100‑4 (MQ=21)

                                                                                    ggCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATAAGACGCGACCGCGTCGCATCAGGcatc                <  1:220702/100‑4 (MQ=21)

                                                                                    ggCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATAAGACGCGACCGCGTCGCATCAGGcatc                <  2:2516299/100‑4 (MQ=21)

                                                                                      cgcgGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACa              <  1:2633383/100‑1 (MQ=255)

                                                                                      cgcgGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACa              <  2:205874/100‑1 (MQ=255)

                                                                                      cgcgGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACa              <  1:1396161/100‑1 (MQ=255)

                                                                                      cgcgGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACa              >  1:3665848/1‑100 (MQ=255)

                                                                                        cggttaatcaTCGTCGATATGTAGGCCGGATAAGGCGTTCGCGCCGCAGCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAgg            <  2:3039234‑M2/90‑1 (MQ=255)

                                                                                        cgGTTAATCATGGTCGATATGTCGGCCGGTTAAGGCGTTCACGCCGCGTCCGGCAACCGATGCCTGTTGCGACGCGGTCGCGTCTTATCAGGCCTATAgg            <  1:390745/100‑1 (MQ=18)

                                                                                                caTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGcc    >  2:884762‑M2/3‑100 (MQ=255)

                                                                                                 aTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCg   <  1:779127‑M2/99‑1 (MQ=255)

GTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGA  >  NC_000913/4235313‑4235510

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.