New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4635842 =148 (1.060)7 (0.050) 7/166 NT 4.8% coding (322/474 nt) creA putative periplasmic protein
?NC_000913 4635880 = 139 (1.070)coding (360/474 nt) creA putative periplasmic protein
Rejected: Frequency below cutoff threshold.

Only 100 of 187 total aligned reads displayed.

GATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGTAGAAGGTTCGCCGAAAAACGCGATTAGCGCGGTTCCTGTCATG  >  NC_000913/4635781‑4635979
                                                                                                   |                                                                                                   
 tctacaactttgtcggagtaagccagataagcgagcgcgttgcgtttggcatcataaaagCGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCt                                                                                                    >  1:1154158‑M1/61‑100 (MQ=255)
  ttGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCtt                                                                                                   <  1:1746164/100‑1 (MQ=255)
   tGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCttt                                                                                                  <  2:2979310/100‑1 (MQ=255)
   tGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCttt                                                                                                  <  2:2230077/100‑1 (MQ=255)
   tGAACTGTCGGATCGTATTAAAAACGGAAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCttt                                                                                                  <  1:2000584/100‑1 (MQ=255)
    gAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCtttt                                                                                                 >  2:3407119/1‑100 (MQ=255)
    gAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCtttt                                                                                                 >  2:756683/1‑100 (MQ=255)
    acaactttgtcggagtaagccagataagcgagcgcgttgcgtttggcatcataaaaaCGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCtttt                                                                                                 >  2:3184919‑M1/58‑100 (MQ=255)
     caactttgtcggagtaagccagataagcgagcgcgttgcgtttggcatcataaaaaCGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTa                                                                                                >  1:224567‑M1/57‑100 (MQ=255)
     aaCTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTa                                                                                                <  2:1484195/100‑1 (MQ=255)
      aCTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTat                                                                                               <  2:1690876/100‑1 (MQ=255)
      aCTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTat                                                                                               >  1:655644/1‑100 (MQ=255)
      aCTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTat                                                                                               <  2:1140266/100‑1 (MQ=255)
       cTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTatg                                                                                              >  2:441447/1‑100 (MQ=255)
         gTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTatgat                                                                                            <  1:625172/100‑1 (MQ=255)
         gTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTatgat                                                                                            >  2:2345936/1‑100 (MQ=255)
            ggATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGcc                                                                                         >  1:3253082/1‑100 (MQ=255)
              aTCGTATTAAAAACGGCAAAGCTCAGGGCAAGGTAGTATTCAAAACACGCACGTCCCTGGTCTGTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCaa                                                                                       <  1:1365583/100‑1 (MQ=255)
                 gTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAaacg                                                                                    <  2:2466347/100‑1 (MQ=255)
                 gTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAaacg                                                                                    >  2:3133937/1‑100 (MQ=255)
                  tATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAaacgc                                                                                   >  1:2291152/1‑100 (MQ=255)
                   aTTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAaacgca                                                                                  <  2:2609888/100‑1 (MQ=255)
                   aTTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAaacgca                                                                                  >  2:2836995/1‑100 (MQ=255)
                   aTTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAaacgca                                                                                  >  2:3060240/1‑100 (MQ=255)
                    tgaaaaaCGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGGACGTCCGTGGTCTTTAAGTCGTTACAGGTCGTGCGCGTTTATGATGCCAaacgcaa                                                                                 <  1:104113/98‑1 (MQ=255)
                     tAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAaacgcaac                                                                                >  1:1787769/1‑100 (MQ=255)
                      aaaaaCGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCCCGTCCCTGGTCTTTAAGTCGTTACAGGTTGTGCGCTTTTATGATGCCAaccgcaacg                                                                               >  1:118290/1‑100 (MQ=255)
                      aaaaaCGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAaacgcaacg                                                                               <  1:466205/100‑1 (MQ=255)
                       aaaaCGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAaacgcaacgc                                                                              >  2:2879234/1‑100 (MQ=255)
                       aaaaCGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGAGCGCTTTTATGATGCCAaacgcaacgc                                                                              >  2:3433843/1‑100 (MQ=255)
                         aaCGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACgcgc                                                                            <  2:1370365/100‑1 (MQ=255)
                             gCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGcgctcgc                                                                        >  2:2360405/1‑100 (MQ=255)
                             gCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGcgctcgc                                                                        >  2:1523083/1‑100 (MQ=255)
                              cAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGcgctcgct                                                                       <  1:3752520/100‑1 (MQ=255)
                                 aGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTAt                                                                    >  2:1078797/1‑100 (MQ=255)
                                   cTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCt                                                                  <  1:3472410/100‑1 (MQ=255)
                                   cTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCt                                                                  <  1:3404941/100‑1 (MQ=255)
                                    tCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGATCGTGCGGTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTg                                                                 >  2:221948/1‑100 (MQ=255)
                                      aGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGc                                                               >  2:303875/1‑100 (MQ=255)
                                      aGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGc                                                               <  2:1430391/100‑1 (MQ=255)
                                      aGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGc                                                               >  1:1658671/1‑100 (MQ=255)
                                       gggCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCt                                                              <  2:497054/100‑1 (MQ=255)
                                        ggCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCtt                                                             <  2:1386602/100‑1 (MQ=255)
                                          cGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTAc                                                           >  2:2490175/1‑100 (MQ=255)
                                            aGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTc                                                         >  2:809794/1‑100 (MQ=255)
                                             ggTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTcc                                                        <  2:1534057/100‑1 (MQ=255)
                                              gtagtaTTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCg                                                       <  2:2154185/100‑1 (MQ=255)
                                               tggtaGTCAAAATACGCACGTTCGGGGTCTTGAAGTCGTGACAGGTCGGGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACt                                                          <  1:2918367/94‑1 (MQ=255)
                                                ggcatcataaaagcgcacgacctggaacggcttaaagaccagggacgtgcgCTTTTATGATGCCAAACGCACCGCGCTCGCTTATCTGGCTTACTCAGAc                                                     >  1:984974‑M2/52‑100 (MQ=255)
                                                agtaTTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGAc                                                     <  2:184639/100‑1 (MQ=255)
                                                agtaTTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGAc                                                     <  2:564206/100‑1 (MQ=255)
                                                agtaTTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGAc                                                     <  2:193432/100‑1 (MQ=255)
                                                 gtaTTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATTCCAAACGCAACGGGCTCGCTTATCTGGCTTACTCCGACa                                                    >  1:1876054/1‑100 (MQ=255)
                                                 gtaTTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACa                                                    >  1:1375847/1‑100 (MQ=255)
                                                  taTTCAAAAAACGCACGTCCCTGGTCTTTACGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACaa                                                   >  1:3487948/1‑100 (MQ=255)
                                                   aTTCAAAAAACTCACGTCACTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTACGACaaa                                                  >  1:711539/1‑100 (MQ=255)
                                                     tCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGt                                                <  2:2043933/100‑1 (MQ=255)
                                                     tCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGt                                                <  2:879499/100‑1 (MQ=255)
                                                     tCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGt                                                <  2:1443089/100‑1 (MQ=255)
                                                      cAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGGCAAACTCAGCGCGCTCGCTTATCTGGCTTACTCCGACACAGtt                                               <  1:169388/100‑1 (MQ=255)
                                                      cAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGtt                                               >  2:838946/1‑100 (MQ=255)
                                                      cAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGtt                                               >  2:910729/1‑100 (MQ=255)
                                                      cAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGtt                                               >  1:70398/1‑100 (MQ=255)
                                                      cAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGtt                                               >  1:2526900/1‑100 (MQ=255)
                                                      cAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGt                                                <  1:974354/99‑1 (MQ=255)
                                                      ataaaagcgcacgacctgtaacgacttaaagaccaggaacgtgcgCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGtt                                               >  1:2024610‑M2/46‑100 (MQ=255)
                                                       aaaaaaCGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGt                                                <  1:1452098/98‑1 (MQ=255)
                                                       aaaaaaCGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTg                                              <  1:2958273/100‑1 (MQ=255)
                                                        aaaagcgcacgacctgtaacgacttaaagaccagggacgtgcgTTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGt                                             >  2:3184919‑M2/44‑100 (MQ=255)
                                                        aaaaaCGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGt                                             <  2:600706/100‑1 (MQ=255)
                                                         aaaaCGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGTa                                            >  1:390905/1‑100 (MQ=255)
                                                          aagcgcacgacctgtaacgacttaaagaccagggacgtgcgCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGTAg                                           >  2:3310612‑M2/42‑100 (MQ=255)
                                                          aaaCGCACGTCCCTGGTCTTAAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGTAg                                           >  1:2316516/1‑100 (MQ=255)
                                                               cacgacctgtaacgacttaaagaccagggacgtgcgTTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGTAGAAGGt                                      >  2:1663412‑M2/37‑100 (MQ=255)
                                                                  GTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGTAGAAGGTTCg                                   >  2:1163876‑M1/1‑100 (MQ=255)
                                                                    cccTGGTCTTTAAGTCGTTACAGGTCGTTCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGTAGAAGGTTCGcc                                 <  2:3172099/100‑1 (MQ=255)
                                                                    cccTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGTAGAAGGTTCGcc                                 <  2:3538681/100‑1 (MQ=255)
                                                                    cccTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGTAGAAGGTTCGcc                                 <  2:1719605/100‑1 (MQ=255)
                                                                            tttAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGTAGAAGGTTCGCCGAAAAAcg                         >  2:1977047/1‑100 (MQ=255)
                                                                            tttAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGTAGAAGGTTCGCCGAAAAAcg                         <  2:2093132/100‑1 (MQ=255)
                                                                            tttAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGTAGAAGGTTCGCCGAAAAAcg                         <  2:2699226/100‑1 (MQ=255)
                                                                             ttAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGTAGAAGGTTCGCCGAAAAAcgc                        <  2:1158703/100‑1 (MQ=255)
                                                                              tAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGTAGAAGGTTCGCCGAAAAAcgcg                       >  1:2639610/1‑100 (MQ=255)
                                                                              tAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGTAGAAGGTTCGCCGAAAAAcgcg                       >  1:859405/1‑100 (MQ=255)
                                                                               aaGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGTAGAAGGTTCGCCGAAAAACGCGa                      >  1:843811/1‑100 (MQ=255)
                                                                                aGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGTAGAAGGTTCGCCGAAAAACGCGAt                     >  1:2996858/1‑100 (MQ=255)
                                                                                aGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGTAGAAGGTTCGCCGAAAAACGCGAt                     >  1:3055609/1‑100 (MQ=255)
                                                                                   cGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGTAGAAGGTTCGCCGAAAAACGCGATTAg                  >  1:668906/1‑100 (MQ=255)
                                                                                   cGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGTAGAAGGTTCGCCGAAAAACGCGATTAg                  >  2:2711037/1‑100 (MQ=255)
                                                                                    gTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGTAGAAGGTTCGCCGAAAAACGCGATTAgc                 >  1:3177349/1‑100 (MQ=255)
                                                                                      tACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGTAGAAGGTTCGCCGAAAAACGCGATTAgcgc               >  1:3103441/1‑100 (MQ=255)
                                                                                        cAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTCTCTGGCTTACTCCGACAAAGTTGTAGAAGGTTCGCCGAAAAACGCGATTAGCGCgg             <  1:2435229/100‑1 (MQ=255)
                                                                                        cAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGTAGAAGCTTCGCCGAAAAACGCGATTAGCGCgg             <  2:2316526/100‑1 (MQ=255)
                                                                                          ggTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGTAGAAGGTTCGCCGAAAAACGCGATTAGCGCGGtt           >  2:3779264/1‑100 (MQ=255)
                                                                                          ggTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGTAGAAGGTTCGCCGAAAAACGCGATTAGCGCGGtt           >  1:578581/1‑100 (MQ=255)
                                                                                            tCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGTAGAAGGTTCGCCGAAAAACGCGATTAGCGCGGTTcc         <  1:371510/100‑1 (MQ=255)
                                                                                               tgcgCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGTAGAAGGTTCGCCGAAAAACGCGATTAGCGCGGTTCCTGt      >  2:197599‑M2/5‑100 (MQ=255)
                                                                                                 cgCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGTAGAAGGTTCGCCGAAAAACGCGATTAGCGCGGTTCCTGTCa    >  2:2325568‑M2/3‑100 (MQ=255)
                                                                                                 cgCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGTAGAAGGTTCGCCGAAAAACGCGATTAGCGCGGTTCCTGTCa    >  2:1794097‑M2/3‑100 (MQ=255)
                                                                                                  gCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGTAGAAGGTTCGCCGAAAAACGCGATTAGCGCGGTTCCTGTCAt   <  1:1125675‑M2/99‑1 (MQ=255)
                                                                                                   |                                                                                                   
GATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGTAGAAGGTTCGCCGAAAAACGCGATTAGCGCGGTTCCTGTCATG  >  NC_000913/4635781‑4635979

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.