New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4639713148 (1.060)6 (0.040) 6/172 NT 3.8% coding (594/717 nt) arcA response regulator in two‑component regulatory system with ArcB or CpxA
?NC_000913 = 4639734 164 (1.220)coding (573/717 nt) arcA response regulator in two‑component regulatory system with ArcB or CpxA
Rejected: Frequency below cutoff threshold.

Only 100 of 199 total aligned reads displayed.

TGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTAC  >  NC_000913/4639637‑4639833
                                                                                                 |                                                                                                   
tGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGcc                                                                                                   >  2:2109482‑M2/1‑98 (MQ=255)
tGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGcc                                                                                                   <  2:1889180‑M2/100‑3 (MQ=255)
 ggCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACCGTACGGTCGTGCGGTTTCAGCTCACGGccg                                                                                                  <  2:1917721‑M2/100‑4 (MQ=255)
 ggCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGccg                                                                                                  <  1:2484839‑M2/100‑4 (MQ=255)
   cGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGt                                                                                                >  2:24818/1‑100 (MQ=255)
   cGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGt                                                                                                <  1:118922/100‑1 (MQ=255)
   cGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGt                                                                                                <  1:468865/100‑1 (MQ=255)
    gatgatTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTc                                                                                               <  1:715472/100‑1 (MQ=255)
       gatTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCAtt                                                                                            <  2:3669370/100‑1 (MQ=255)
        atTTCCGGCGTATCCGGCGTAGATTCGAAATGTATACGAATACGGCGGATCGTCACGTCTACAGTACGGTGGTGCGGTTTCAGCTCACCGCCGGTCAttt                                                                                           >  1:2274868/1‑100 (MQ=255)
           tccggcgtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTttct                                                                                        <  1:3765027/100‑1 (MQ=255)
           tccggcgtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTttct                                                                                        <  2:833134/100‑1 (MQ=255)
           tccggcgtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCCCACGGCCGGTCATTttct                                                                                        >  2:892359/1‑100 (MQ=255)
            ccggcgtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTttctt                                                                                       >  1:3504605/1‑100 (MQ=255)
            ccggcgtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTttctt                                                                                       >  2:2715219/1‑100 (MQ=255)
             cggcgtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTttcttc                                                                                      <  1:1013410/100‑1 (MQ=255)
             cggcgtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTttcttc                                                                                      <  2:3791486/100‑1 (MQ=255)
             cggcgtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTttcttc                                                                                      <  2:3539382/100‑1 (MQ=255)
             cggcgtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTttcttc                                                                                      <  2:2433465/100‑1 (MQ=255)
                cgtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTcagc                                                                                   <  1:2547862/100‑1 (MQ=255)
                cgtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTcagc                                                                                   <  1:339351/100‑1 (MQ=255)
                 gtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTcagca                                                                                  >  2:144688/1‑100 (MQ=255)
                  tatccggcgtaTATTCGAAATGTTTTCGAATACGTCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTca                                                                                     <  2:2936039/96‑1 (MQ=255)
                  tatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTcagcag                                                                                 >  1:1864471/1‑100 (MQ=255)
                    tccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGtt                                                                               >  1:1337984/1‑100 (MQ=255)
                     ccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTc                                                                              <  1:1124547/100‑1 (MQ=255)
                     ccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTc                                                                              >  2:164642/1‑100 (MQ=255)
                     ccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTc                                                                              >  1:831253/1‑100 (MQ=255)
                      cggcgtaGATTCGAAATGTTTACGAATAAGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTc                                                                              <  2:2079924/99‑1 (MQ=255)
                          gtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCCGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCAc                                                                         <  2:2670845/100‑1 (MQ=255)
                             gATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACggg                                                                      <  2:3500707/100‑1 (MQ=255)
                              nttCGAAATGTTTACGAATACGGCGGATCGTCACGTCCACAGTACGGTCTTGCGGTTTCACCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGa                                                                     >  1:209461/2‑100 (MQ=255)
                              aTTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGa                                                                     >  2:271453/1‑100 (MQ=255)
                                 cGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTg                                                                  >  2:2884773/1‑100 (MQ=255)
                                  gAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGa                                                                 >  2:1153302/1‑100 (MQ=255)
                                   aaaTGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGaa                                                                <  1:2719532/100‑1 (MQ=255)
                                      tGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAAttt                                                             <  1:3327617/100‑1 (MQ=255)
                                       gTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAAtttt                                                            >  2:2831967/1‑100 (MQ=255)
                                         ttACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGc                                                          <  2:2518502/100‑1 (MQ=255)
                                          tACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCTGGTCATTTTCTTCAGCAGTTCAGCACGGCACTGAATTTTGcc                                                         <  2:2571838/100‑1 (MQ=255)
                                          tACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGGCTGAATTTTGcc                                                         >  1:1598068/1‑100 (MQ=255)
                                           aCGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCt                                                        <  2:897921/100‑1 (MQ=255)
                                            cGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTg                                                       >  2:3342304/1‑100 (MQ=255)
                                            cGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTg                                                       >  2:659107/1‑100 (MQ=255)
                                            cGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTg                                                       >  2:2129191/1‑100 (MQ=255)
                                              aaTACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTggg                                                     <  2:1213175/100‑1 (MQ=255)
                                                  cggcggATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGtttt                                                 >  2:2958295/1‑100 (MQ=255)
                                                  cggcggATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGtttt                                                 <  2:1926506/100‑1 (MQ=255)
                                                  cggcggATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTACCTGGAtttt                                                 <  1:2652349/100‑1 (MQ=255)
                                                   ggcggcTCGTCACGTCTACACAACGCTCGTCCGGTTTCAGCTCACGGCCGGTCCTCTTCTTCCGCCCTTCAGCACGGGACTGAATTTTGCCTGTGTTTTc                                                <  1:314832/100‑1 (MQ=255)
                                                    gcggATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTca                                               >  2:326425/1‑100 (MQ=255)
                                                    gcggATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTca                                               <  1:816659/100‑1 (MQ=255)
                                                    gcggATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTca                                               >  2:1860077/1‑100 (MQ=255)
                                                    gcggATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTca                                               >  1:414809/1‑100 (MQ=255)
                                                        aTCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGa                                           >  1:1959276/1‑100 (MQ=255)
                                                        aTCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCAGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGa                                           <  1:600614/100‑1 (MQ=255)
                                                           gTCACGTTTACAGTACGGTCGTGCGGTTTCAGCGCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGt                                        <  1:202583/100‑1 (MQ=255)
                                                            tCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTg                                       >  2:1735442/1‑100 (MQ=255)
                                                             cACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGccgtactgtagacgtgacgatccgccgtattcgtaaacatttcgaatctacgccggatacgcc                                      <  1:1783614‑M2/100‑64 (MQ=255)
                                                             cACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGa                                      <  1:326423/100‑1 (MQ=255)
                                                               cGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCCTTTTCTTCAGCAGTTCAGCACGGGACTGACTTTTGCCTGGGTTTTCACAGAAGTGAAg                                    >  2:1203816/1‑100 (MQ=255)
                                                               cGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAg                                    >  2:124894/1‑100 (MQ=255)
                                                               cGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAg                                    <  2:3242222/100‑1 (MQ=255)
                                                               cGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAg                                    >  1:2120392/1‑100 (MQ=255)
                                                                gTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGc                                   <  2:1995167/100‑1 (MQ=255)
                                                                gTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGc                                   >  1:2950021/1‑100 (MQ=255)
                                                                      aGTACGGTCGTGCGGTTTCAGCTCACGGccgtactgtagacgtgacgatccgccgtattcgtaaacatttcgaatctacgccggatacgccggaaatcat                             <  1:561599‑M2/100‑73 (MQ=255)
                                                                       gTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATgg                               <  1:3529830/97‑1 (MQ=255)
                                                                       gTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGgcgc                            <  2:143546/100‑1 (MQ=255)
                                                                       gTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGgcgc                            >  2:2193463/1‑100 (MQ=255)
                                                                       gTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATGTTGCCTGGGTTTTCACAGAAGTGAAGCATGgcgc                            >  1:955255/1‑100 (MQ=255)
                                                                         aCGGTCGTGCGGTTTCAGCTCACGGccgtactgtagacgtgacgatccgccgtattcgtaaacatttcgaatctacgccggatacgccggaaatcatcgc                          <  1:2233336‑M2/100‑76 (MQ=255)
                                                                         aCGGTCGTGCGGTTTCAGCTCACGGGCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCgg                          <  1:2372477/100‑1 (MQ=255)
                                                                         aCGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCgg                          <  1:1511362/100‑1 (MQ=255)
                                                                          cGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGa                         <  2:2870419/100‑1 (MQ=255)
                                                                            gTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAAc                       <  2:1367618/100‑1 (MQ=255)
                                                                              cGTGCGGTTTCAGCTAACGGCCGGTCATTATCTTCAGCAGGTCAGCACGCGACTGAATTTTGCCTAGGTTTTCACAGAAGTGAAGCATTGcgcgacattc                     >  1:1706882/1‑94 (MQ=255)
                                                                               gTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCg                    >  1:1761703/1‑100 (MQ=255)
                                                                                tGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGc                   <  1:1072715/100‑1 (MQ=255)
                                                                                tGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGc                   <  2:2045690/100‑1 (MQ=255)
                                                                                  cGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTg                 >  2:696488/1‑100 (MQ=255)
                                                                                  cGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTg                 <  1:892737/100‑1 (MQ=255)
                                                                                   ggTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTgc                >  2:405979/1‑100 (MQ=255)
                                                                                    gTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTgcg               >  2:790843/1‑100 (MQ=255)
                                                                                      ttCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGcgcg             <  1:2715202/100‑1 (MQ=255)
                                                                                       tCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCgg            <  2:26517/100‑1 (MQ=255)
                                                                                       tCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCgg            <  1:796706/100‑1 (MQ=255)
                                                                                        naGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGc           >  2:932752/2‑100 (MQ=255)
                                                                                        cAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGc           <  2:454432/100‑1 (MQ=255)
                                                                                         aGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCa          <  2:3035253/100‑1 (MQ=255)
                                                                                          gCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAg         >  1:2831605/1‑100 (MQ=255)
                                                                                           cTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCCCGGGACTGAGTTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGc        >  1:1787503/1‑100 (MQ=255)
                                                                                            tCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCt       <  2:2274878/100‑1 (MQ=255)
                                                                                             cACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCtt      >  2:1580833/1‑100 (MQ=255)
                                                                                             cACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCtt      >  2:506802/1‑100 (MQ=255)
                                                                                             cACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCtt      >  1:3177586/1‑100 (MQ=255)
                                                                                              aCGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTg     <  2:2351945/100‑1 (MQ=255)
                                                                                               cGGCCGGTGATTTTCGCCACTAGTTCACCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAg         <  2:3452088/95‑1 (MQ=255)
                                                                                               cGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGt    >  2:1818892/1‑100 (MQ=255)
                                                                                                 gCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTAc  <  2:1474823/100‑1 (MQ=255)
                                                                                                 |                                                                                                   
TGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTAC  >  NC_000913/4639637‑4639833

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.