BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1180354 =	NA (NA)	12 (0.130) +CTGCAAGGGGACGCAATTAATTGAATTTGCG	6/116	NT	NA	noncoding (1/96 nt)	RIP104 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP104 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
*	?	NC_000913	= 2236689	NA (NA)	12 (0.130) +CTGCAAGGGGACGCAATTAATTGAATTTGCG	6/116	NT	NA	intergenic (+189/+54)	preA/mglC	dihydropyrimidine dehydrogenase, NADH‑dependent, subunit C/methyl‑galactoside transporter subunit

Only 100 of 156 total aligned reads displayed.

TGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCG  >  NC_000913/2236590‑2236785

tGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAcc                                                                                                  <  2:3232456/100‑1 (MQ=255)

tGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAcc                                                                                                  >  2:444025/1‑100 (MQ=255)

 gAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGCATGCGGCGTGAACGCCTTATCCGGCCTACAAAACca                                                                                                 >  2:2661670/1‑100 (MQ=255)

   gCTTATTGTAGGCCGGATAAGACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACcaca                                                                                               >  2:3574786/1‑100 (MQ=255)

   gCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACcaca                                                                                               >  1:3349775/1‑100 (MQ=255)

   gCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACcaca                                                                                               >  2:188220/1‑100 (MQ=255)

   gCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACcaca                                                                                               >  1:1851163/1‑100 (MQ=255)

     ttATTGTAGGCCGGATAAAACGCGTCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACcacaca                                                                                             >  1:2527661/1‑100 (MQ=255)

     ttATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACcacaca                                                                                             >  1:2161943/1‑100 (MQ=255)

     ttATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACcacaca                                                                                             >  2:1167165/1‑100 (MQ=255)

        ttGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGAt                                                                                          >  1:2785773/1‑100 (MQ=255)

         tgtgGGCCGGATATAGCGCGCCGGGGTTGCATCCGGCATTTGGCTCCTGTTGCCGGAGGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATc                                                                                         <  1:3082491/100‑1 (MQ=18)

         tGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATc                                                                                         <  2:537852/100‑1 (MQ=255)

             tgCCGTATAAAACGCGCCAGCGTTGTATTTGGCATTTGTGTCCTGTTGCCGGATGAGTCGTGATCTTCTTATCGGGCCTATAAAACAACTCAGATCa                                                                                        >  1:1875620/2‑97 (MQ=255)

             ggCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCatga                                                                                     <  2:3332520/100‑1 (MQ=255)

             ggCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCatga                                                                                     >  2:3116757/1‑100 (MQ=255)

               ccGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCatgatg                                                                                   <  1:967657/100‑1 (MQ=255)

                cGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGt                                                                                  <  2:49349/100‑1 (MQ=255)

                cGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGt                                                                                  >  2:3473444/1‑100 (MQ=255)

                 ggATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGtt                                                                                 >  2:2200952/1‑100 (MQ=255)

                 ggATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGtt                                                                                 <  1:341325/100‑1 (MQ=255)

                  gATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTa                                                                                >  2:1485813/1‑100 (MQ=255)

                  gATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTa                                                                                <  2:2451814/100‑1 (MQ=255)

                    tAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTAtg                                                                              <  2:586369/100‑1 (MQ=255)

                    tAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTAtg                                                                              <  2:2410101/100‑1 (MQ=255)

                      aaaCGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTAtgtg                                                                            >  2:3474970/1‑100 (MQ=255)

                       aaCGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGc                                                                           >  2:2647842/1‑100 (MQ=255)

                        aCGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCg                                                                          >  2:2147750/1‑100 (MQ=255)

                           cgcCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGttt                                                                       <  1:901422/100‑1 (MQ=255)

                            gcCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTa                                                                      <  1:2979147/100‑1 (MQ=255)

                             ccAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTAt                                                                     >  2:3481260/1‑100 (MQ=255)

                             ccAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTAt                                                                     >  2:129865/1‑100 (MQ=255)

                              cAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATg                                                                    <  1:3037359/100‑1 (MQ=255)

                              cAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATg                                                                    <  2:3436768/100‑1 (MQ=255)

                               aGCGTTGCATCCGTCATTTGGCTCCTGTTGCCGGATGCGGCGGGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATg                                                                    <  1:1796896/99‑1 (MQ=255)

                                  gTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCTGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCg                                                                <  2:1403881/100‑1 (MQ=255)

                                  gTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCg                                                                <  2:3401257/100‑1 (MQ=255)

                                    tGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGaa                                                              <  2:3680016/100‑1 (MQ=255)

                                      cATCCGGCATTTGGCTCCTGTTGCCGAATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATg                                                            >  2:2306273/1‑100 (MQ=255)

                                       aTCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGc                                                           >  2:1056110/1‑100 (MQ=255)

                                         ccGGCATTTGGCTCCTGTTGCCGGATGCGGCATGACCGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCg                                                          <  2:3090569/99‑1 (MQ=255)

                                          cGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGa                                                        >  1:2563093/1‑100 (MQ=255)

                                          cGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGa                                                        <  2:670074/100‑1 (MQ=255)

                                           ggCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGAc                                                       <  1:1006542/100‑1 (MQ=255)

                                            gCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGAcc                                                      <  2:130474/100‑1 (MQ=255)

                                            gCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGAcc                                                      <  1:730332/100‑1 (MQ=255)

                                            gCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGAcc                                                      <  2:1569899/100‑1 (MQ=255)

                                                  ggCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTc                                                >  1:2682066/1‑100 (MQ=255)

                                                  ggCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTc                                                <  1:2218327/100‑1 (MQ=255)

                                                  ggCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCCACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACCTTc                                                >  2:822576/1‑100 (MQ=255)

                                                    cTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTcac                                              >  2:903142/1‑100 (MQ=255)

                                                        ttattccggatgGGGCGCGAACGCCTTATCCGGCCCACAAAACCcgcaaattcaattaattgcgtccccttgcaggcctgatgcactacgcttatcaggc                                          >  2:1483792‑M2/6‑44 (MQ=255)

                                                         tattccggatGGGGCGCGAACGCCTTATCCGGCCCACAAAACCcgcaaattcaattaattgcgtccccttgcaggcctgatgcactacgcttatcaggcc                                         >  1:3362076‑M2/5‑43 (MQ=255)

                                                           ttccggATGGGGCGCGAACGCCTTATCCGGCCCACAAAACCcgcaaattcaattaattgcgtccccttgcaggcctgatgcactacgcttatcaggcctg                                       >  1:1037858‑M2/3‑41 (MQ=255)

                                                            gCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTc                                      >  2:1415265/1‑100 (MQ=255)

                                                             ccGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCt                                     <  1:1184380/100‑1 (MQ=255)

                                                              cGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCtt                                    <  1:246298/100‑1 (MQ=255)

                                                               ggATGGGGCGCGAACGCCTTATCCGGCCCACAAAACCcgcaaattcaattaattgcgtccccttgcaggcctgatgcactacgcttatcaggcctgcaag                                   >  2:3677791‑M2/1‑37 (MQ=255)

                                                                gATGGGGCGCGAACGCCTTATCCGGCCCACAAAACCcgcaaattcaattaattgcgtccccttgcaggcctgatgcactacgcttatcaggcctgcaagg                                  >  1:1501757‑M2/1‑36 (MQ=255)

                                                                 aTGGGGCGCGAACGCCTTATCCGGCCCACAAAACCcgcaaattcaattaattgcgtccccttgcaggcctgatgcactacgcttatcaggcctgcaaggg                                 >  2:2841907‑M2/1‑35 (MQ=255)

                                                                 aTGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTAcg                                 <  2:1863012/100‑1 (MQ=255)

                                                                 aTGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTAc                                  <  1:874286/99‑1 (MQ=255)

                                                                  tgctgcGTGAATGTCTTATCTGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTAcgn                                <  1:3630870/100‑2 (MQ=255)

                                                                  tGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGATCACATTCACATCATTTCTTAcgc                                <  1:405260/100‑1 (MQ=255)

                                                                   gcggcgTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTAcgcg                               <  2:1655202/100‑1 (MQ=255)

                                                                   gcggcgTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTAcgcg                               >  2:3187358/1‑100 (MQ=255)

                                                                    cggcgTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTAcgcgc                              <  2:1102372/100‑1 (MQ=255)

                                                                     ggcgTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTAcgcgcg                             <  1:1860911/100‑1 (MQ=255)

                                                                       cgTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTa                           <  2:429220/100‑1 (MQ=255)

                                                                            aCGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCa                      >  1:2173840/1‑100 (MQ=255)

                                                                            aCGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCa                      >  1:2435036/1‑100 (MQ=255)

                                                                             cGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAg                     <  2:3359800/100‑1 (MQ=255)

                                                                              gCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGt                    <  2:758747/100‑1 (MQ=255)

                                                                              gCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGt                    >  2:938468/1‑100 (MQ=255)

                                                                              gCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGt                    >  1:2379137/1‑100 (MQ=255)

                                                                              gCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGt                    <  1:433154/100‑1 (MQ=255)

                                                                              gCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCAAATGCGGCCCACATTCACTTCATTTCTTACGCGCGTATTTCAGt                    <  2:1764350/100‑1 (MQ=255)

                                                                               ccTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTccg                     >  1:990222/1‑96 (MQ=255)

                                                                               ccTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTg                   <  2:2785790/100‑1 (MQ=255)

                                                                               ccTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTg                   <  2:2376532/100‑1 (MQ=255)

                                                                               ccTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTg                   <  1:1611049/100‑1 (MQ=255)

                                                                               ccTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTg                   <  2:1748640/100‑1 (MQ=255)

                                                                               ccTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTg                   <  2:3607662/100‑1 (MQ=255)

                                                                               ccTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACAGCATTTCTTACGCGCGTATTTCAGTg                   >  1:800806/1‑100 (MQ=255)

                                                                                 ttATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGaa                 <  2:757650/100‑1 (MQ=255)

                                                                                  tATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAAt                >  2:2657243/1‑100 (MQ=255)

                                                                                  tATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAAt                >  1:106902/1‑100 (MQ=255)

                                                                                   agccGGTCTACAAATCGACACAGATCGTGATGTTATGTGCGTTTATGAGCGAAGGCGGACGACATTCACATCATTTCTTACGCGCGTATTTCAGTg                   <  1:1259501/94‑1 (MQ=255)

                                                                                    tCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATcc              <  1:539913/100‑1 (MQ=255)

                                                                                     ccGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCa             >  1:278180/1‑100 (MQ=255)

                                                                                      cGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAg            >  2:3365102/1‑100 (MQ=255)

                                                                                       ggCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAgc           >  2:1834413/1‑100 (MQ=255)

                                                                                        gCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGATTCCAgcg          <  2:1995295/100‑1 (MQ=255)

                                                                                        gCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAgcg          >  2:1731384/1‑100 (MQ=255)

                                                                                         ccTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAgcgc         >  2:2129883/1‑100 (MQ=255)

                                                                                           tACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCt        >  1:2394243/1‑99 (MQ=255)

                                                                                            aCAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTAc      >  2:2349978/1‑100 (MQ=255)

                                                                                              aaaaCCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACg     >  2:653747/1‑99 (MQ=255)

                                                                                               aaaCCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGc   <  1:1056105/100‑1 (MQ=255)

                                                                                                aaCCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCg  <  2:1607413/100‑1 (MQ=255)

TGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCG  >  NC_000913/2236590‑2236785

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.