New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2252796 =NA (NA)11 (0.090) 8/164 NT NA noncoding (1/91 nt) RIP157 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP157 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 2252829 = NA (NA)noncoding (34/91 nt) RIP157 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP157 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 198 total aligned reads displayed.

GCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATAAAGAACCCGGCAATGGTC  >  NC_000913/2252730‑2252928
                                                                                                   |                                                                                                   
gcgtagacaagCCTACCCTGTGTGGCGATAACGCGCGGTCATGAGTGCGAATGGGGTAACAATGGTGCCGGATGCGACGCTTAACGCGTCTTATCCGGcc                                                                                                     <  1:486221/94‑1 (MQ=21)
 cTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGcc                                                                                                     >  1:1805676/1‑99 (MQ=255)
 cTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCt                                                                                                    >  1:140718/1‑100 (MQ=255)
 cTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCt                                                                                                    <  2:1954632/100‑1 (MQ=255)
 cTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCt                                                                                                    <  2:3513491/100‑1 (MQ=255)
 cTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCt                                                                                                    <  2:53303/100‑1 (MQ=255)
  ttAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCCATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCt                                                                                                    <  1:1366628/99‑1 (MQ=255)
   tcattgcctgatgcgcaagcttatcaggcctacatttacttgctgaaattgcctgatttgtagGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTAc                                                                                                  >  2:3751455‑M1/64‑100 (MQ=255)
   tAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTAc                                                                                                  <  1:1765708/100‑1 (MQ=255)
    aaaCAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACa                                                                                                 <  1:748867/100‑1 (MQ=255)
     aacaacCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACaa                                                                                                >  2:1481850/1‑100 (MQ=255)
     aacaacCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACaa                                                                                                >  1:2373346/1‑100 (MQ=255)
      acaacCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACaaa                                                                                               <  2:2401836/100‑1 (MQ=255)
       caacCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAAt                                                                                              >  2:377419/1‑100 (MQ=255)
       caacCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGAATGCGACGCTTAACGCGTCTTATCCGGCCTACAAAt                                                                                              >  1:2269268/1‑100 (MQ=255)
        aacCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATc                                                                                             <  2:3393634/100‑1 (MQ=255)
          ccctaccctGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAg                                                                                           >  2:3695372/1‑100 (MQ=255)
          ccctaccctGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAg                                                                                           <  2:556767/100‑1 (MQ=255)
          ccctaccctGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAg                                                                                           <  1:2319278/100‑1 (MQ=255)
          ccctaccctGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAg                                                                                           <  1:632895/100‑1 (MQ=255)
           tgatgcgcaagcttatcaggcctacatttacttgctgaaattgcctgatttgtagGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAgg                                                                                          >  1:728890‑M1/56‑100 (MQ=255)
           cctaccctGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACTCTTAACGCGTCTTATCCGGCCTACAAATCAg                                                                                           >  1:1685620/1‑99 (MQ=255)
              accctGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCaa                                                                                       <  1:3235602/100‑1 (MQ=255)
               ccctGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAAt                                                                                      >  2:3003631/1‑100 (MQ=255)
               ccctGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAAt                                                                                      <  1:2507924/100‑1 (MQ=255)
                cctGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAAtt                                                                                     >  2:726338/1‑100 (MQ=255)
                 ctGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCAGATGCTACGCTTAACGCGTCTTATCCGTCCTACAAATCAGGCAAttt                                                                                    >  1:3588527/1‑100 (MQ=255)
                   gTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCa                                                                                  <  2:766189/100‑1 (MQ=255)
                   gTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCa                                                                                  <  2:638636/100‑1 (MQ=255)
                    tCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAg                                                                                 <  1:1534770/100‑1 (MQ=255)
                     cTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGc                                                                                <  1:813459/100‑1 (MQ=255)
                      tGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCa                                                                               >  2:42023/1‑100 (MQ=255)
                         cGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCTGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCaa                                                                              <  1:1343937/98‑1 (MQ=255)
                          gATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTa                                                                           <  2:1154709/100‑1 (MQ=255)
                               cgcgCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGt                                                                      <  1:1100301/100‑1 (MQ=255)
                                   cTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGc                                                                  >  2:2807466/1‑100 (MQ=255)
                                   cTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATCTCAGCAAGTAAATGTAGGc                                                                  >  2:82539/1‑100 (MQ=255)
                                    tttCATTAGTGCGAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGcc                                                                 <  1:3293816/100‑1 (MQ=255)
                                    tttCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGcc                                                                 <  2:3336912/100‑1 (MQ=255)
                                    tttCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGCCTTATCCGGCCTACAAATCAGGTAATTTCAGCAAGTAAATGTAGGcc                                                                 <  2:1698795/100‑1 (MQ=255)
                                      tCATTAGTGCCAATGGTGTAACAATTTTGCCAGAGGCGACACCTACCGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAg                                                                    <  1:2187268/95‑1 (MQ=255)
                                      tCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTg                                                               <  2:1965311/100‑1 (MQ=255)
                                        aTTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGAt                                                             >  2:38335/1‑100 (MQ=255)
                                             tGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCt                                                        >  1:241941/1‑100 (MQ=255)
                                              gCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCtt                                                       >  1:211079/1‑100 (MQ=255)
                                              gCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCtt                                                       >  2:3080920/1‑100 (MQ=255)
                                                cAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTgc                                                     <  1:3615564/100‑1 (MQ=255)
                                                 aaTGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTgcg                                                    <  2:558610/100‑1 (MQ=255)
                                                  aTGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTgcgc                                                   <  2:1070824/100‑1 (MQ=255)
                                                       ntAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAg                                              >  2:3666183/2‑100 (MQ=255)
                                                       ctgatttgtaggccggataagacgcgttaagcgtcgcatccggcCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAg                                              >  2:3476964‑M2/45‑100 (MQ=255)
                                                       ctgatttgtaggccggataagacgcgttaagcgtcgcatccggaCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGTCCTGATAAGCTTGCTCATAAg                                              >  1:782634‑M2/45‑100 (MQ=255)
                                                         aaCAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGc                                            >  2:2179343/1‑100 (MQ=255)
                                                         aaCAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGc                                            >  2:943123/1‑100 (MQ=255)
                                                         aaCAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGc                                            >  1:1904419/1‑100 (MQ=255)
                                                             aTGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCaa                                          >  1:863729/1‑98 (MQ=255)
                                                               gTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGac                                      <  1:3526508/100‑1 (MQ=255)
                                                               gTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGac                                      <  2:1268381/100‑1 (MQ=255)
                                                                ttGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGaca                                     >  2:1864384/1‑100 (MQ=255)
                                                                aggccggataagacgcgttaagcgtcgcatccggcCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGaca                                     >  1:2708483‑M2/36‑100 (MQ=255)
                                                                 tGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGacac                                    <  2:1596201/100‑1 (MQ=255)
                                                                 tGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGacac                                    >  1:548864/1‑100 (MQ=255)
                                                                 ggccggataagacgcgttaagcgtcgcatccggcCTACAAATCAGGCAATTTCAGCAAGTAAATGTACGCCTGATAAGCTTGCGCATCAGGCAATGaca                                     >  2:788519‑M2/35‑99 (MQ=255)
                                                                   ccggataagacgcgttaagcgtcgcatccggcCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTc                                  >  1:105265‑M2/33‑100 (MQ=255)
                                                                    CGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCa                                 >  1:3375097‑M1/1‑100 (MQ=255)
                                                                    CGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCa                                 <  2:2691559‑M1/100‑1 (MQ=255)
                                                                     ggataagacgcgttaagcgtcgcatccggcCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCaa                                >  1:192231‑M2/31‑100 (MQ=255)
                                                                     ggataagacgcgttaagcgtcgcatccggcCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCaa                                >  2:3599682‑M2/31‑100 (MQ=255)
                                                                     GGATGCGACGCTTAACGAGTCTTATCCGGCCTACAAATCAGGAACTTTCAGCAATTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACActt                                  >  1:1599049‑M1/1‑97 (MQ=255)
                                                                      GATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAg                               >  2:1766514‑M1/1‑100 (MQ=255)
                                                                      GATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAg                               >  2:2279393‑M1/1‑100 (MQ=255)
                                                                      GATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAACTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAg                               >  1:2103971‑M1/1‑100 (MQ=255)
                                                                       ATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAg                               >  1:1780703‑M1/1‑99 (MQ=255)
                                                                       ATGCGACGCTTAACGCGTCTTATACGGCATACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGc                              >  2:2461243‑M1/1‑100 (MQ=255)
                                                                        TGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCt                             >  2:1388526‑M1/1‑100 (MQ=255)
                                                                        TGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCt                             >  2:321653‑M1/1‑100 (MQ=255)
                                                                          cGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTaa                           >  2:906702/1‑100 (MQ=255)
                                                                             cGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAAcc                        <  1:2649742/100‑1 (MQ=255)
                                                                             cGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAAcc                        <  1:3442551/100‑1 (MQ=255)
                                                                             cGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAAcc                        <  2:58389/100‑1 (MQ=255)
                                                                              gCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCa                       <  2:1535488/100‑1 (MQ=255)
                                                                               cTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCaa                      >  2:2069467/1‑100 (MQ=255)
                                                                                 tAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATa                    <  2:2261237/100‑1 (MQ=255)
                                                                                  aaCTCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATaa                   <  1:1154700/100‑1 (MQ=255)
                                                                                  aaCGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATaa                   >  1:2568651/1‑100 (MQ=255)
                                                                                  aaCGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATaa                   <  2:3467365/100‑1 (MQ=255)
                                                                                  aaCGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATaa                   >  2:1034084/1‑100 (MQ=255)
                                                                                  aaCGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATaa                   >  2:3401918/1‑100 (MQ=255)
                                                                                   aCGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATaaa                  <  2:1244509/100‑1 (MQ=255)
                                                                                    ctcgTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATAAAg                 <  1:3595806/98‑1 (MQ=255)
                                                                                    cgcgTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATAAAg                 <  1:449330/100‑1 (MQ=255)
                                                                                     gcgTCTTATACGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATaaa                  <  1:233714/98‑1 (MQ=255)
                                                                                          ttATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATAAAGAAcc             <  1:3634694/98‑1 (MQ=255)
                                                                                          ttATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATAAAGAACCCg           <  2:603463/100‑1 (MQ=255)
                                                                                             tccggcCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATAAAGAACCCGGCa        >  1:230920‑M2/7‑100 (MQ=255)
                                                                                                ggcCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATAAAGAACCCGGCAAt      >  1:3647715‑M2/4‑99 (MQ=255)
                                                                                                ggcCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATAAAGAACCCGGCAATg     >  2:682968‑M2/4‑100 (MQ=255)
                                                                                                 gcCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCATGCAATGACACCCAAGCTAAACCAATAAAGAACCCGGCaatcg    <  2:2569002‑M2/98‑3 (MQ=255)
                                                                                                  cCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATAAAGAACCCGGCAATGGt   >  1:772204‑M2/2‑100 (MQ=255)
                                                                                                   cTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATAAAGAACCCGGCAATGGTc  >  1:3176263/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATAAAGAACCCGGCAATGGTC  >  NC_000913/2252730‑2252928

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.