New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2798052NA (NA)6 (0.050) 4/166 NT NA intergenic (+8/+39) ygaP/stpA DUF2892 family inner membrane rhodanese/DNA binding protein, nucleoid‑associated
?NC_000913 = 2798082 NA (NA)noncoding (30/30 nt) REP192 (repetitive extragenic palindromic) element; contains 1 REP sequences REP192 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 199 total aligned reads displayed.

TCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGCCCTGACCGGTCCAGGTTTTAGTT  >  NC_000913/2797983‑2798181
                                                                                                   |                                                                                                   
tCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGC                                                                                                     >  1:1174279‑M2/1‑100 (MQ=255)
 cAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGcc                                                                                                    <  2:143449/100‑1 (MQ=255)
 accgaagccaattgctcaggcgctggcagaaggtaaatctctcgacgatttcctgatctaattactgaGGCCGGACGCGCCCTAGCAGCGACATCCGGcc                                                                                                    >  2:1479544‑M1/69‑100 (MQ=255)
 accgaagccaattgctcaggcgctggcagaaggtaaatctctcgacgatttcctgatctaattactgaCGCCGGACGCGCCCTAGCAGCGACATCCGGcc                                                                                                    >  2:2735223‑M1/69‑100 (MQ=255)
  aGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCt                                                                                                   >  2:3580912/1‑100 (MQ=255)
  aGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCt                                                                                                   >  1:3422100/1‑100 (MQ=255)
   cgaagccaattgctcaggcgctggcagaaggtaaatctctcgccgatttcctgatctaattattgaGGCCGGACGCGCCCTAGCAGCGACATCCGGcc                                                                                                    >  2:1234988‑M1/67‑98 (MQ=255)
   cgaagccaattgctcaggcgctggcagaaggtaaatctctcgacgatttcctgatctaattactgaCGCCGGACGCGCCCTAGCAGCGACATCCGGCCTc                                                                                                  >  2:338951‑M1/67‑100 (MQ=255)
    cGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCa                                                                                                 >  1:1239329/1‑100 (MQ=255)
    cGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCa                                                                                                 >  2:300/1‑100 (MQ=255)
     ggTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAg                                                                                                <  2:1108518/100‑1 (MQ=255)
     ggTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAg                                                                                                <  1:2963372/100‑1 (MQ=255)
          ttGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAAtt                                                                                           >  2:2204266/1‑100 (MQ=255)
           tgtgGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTa                                                                                          >  1:1646136/1‑100 (MQ=255)
           tgtgGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTa                                                                                          <  1:2573533/100‑1 (MQ=255)
            gtgGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGTACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAg                                                                                         <  1:1439212/100‑1 (MQ=255)
            gtgGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGt                                                                                               >  1:3595965/1‑94 (MQ=255)
             tgGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGa                                                                                        >  2:728743/1‑100 (MQ=255)
              ggAATAGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACACCGGACCCGCCCTAGCAGCGACATCCGGCCTCAGTACTTAg                                                                                         >  1:3088661/1‑98 (MQ=255)
               gAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGAtn                                                                                      <  1:3136475/100‑2 (MQ=255)
                 caggcgctggcagaaggtaaatctctcgacgatttcctgatctaattactgaCGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAg                                                                                    >  1:2378152‑M1/53‑100 (MQ=255)
                 aTGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAg                                                                                    <  1:3287269/100‑1 (MQ=255)
                 aTGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAg                                                                                    <  2:3269226/100‑1 (MQ=255)
                  tGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAgg                                                                                   >  2:1547684/1‑100 (MQ=255)
                   ggCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGa                                                                                  <  1:63521/100‑1 (MQ=255)
                   ggCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGa                                                                                  >  1:1193765/1‑100 (MQ=255)
                   ggCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGa                                                                                  >  2:203955/1‑100 (MQ=255)
                     cAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCTGGCCTCAGTAATTAGATCAGGaaa                                                                                >  1:1520049/1‑100 (MQ=255)
                     cAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGaaa                                                                                <  1:24060/100‑1 (MQ=255)
                      aaGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAAt                                                                               <  1:2724526/100‑1 (MQ=255)
                        ggTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAAtcg                                                                             >  2:3342505/1‑100 (MQ=255)
                          ttgttAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAAtcgtc                                                                           >  2:3397071/1‑100 (MQ=255)
                          ttgttAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAAtcgtc                                                                           <  2:1899498/100‑1 (MQ=255)
                           tgttAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAAtcgtcg                                                                          <  1:2700303/100‑1 (MQ=255)
                            gttAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCga                                                                         <  2:297481/100‑1 (MQ=255)
                            gttAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCga                                                                         >  2:1728205/1‑100 (MQ=255)
                             ttAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCgag                                                                        <  2:2158026/100‑1 (MQ=255)
                               aGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCgagag                                                                      <  2:481535/100‑1 (MQ=255)
                                gATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCgagaga                                                                     >  1:3483836/1‑100 (MQ=255)
                                gATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCgagaga                                                                     >  2:2358924/1‑100 (MQ=255)
                                 aTAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGAt                                                                    >  1:2802006/1‑100 (MQ=255)
                                  cttccgatcttGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGAtt                                                                   <  2:2456814/90‑1 (MQ=255)
                                    aGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTa                                                                 <  2:3496716/100‑1 (MQ=255)
                                     gATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTAc                                                                <  2:1787774/100‑1 (MQ=255)
                                     gATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTAc                                                                <  1:134322/100‑1 (MQ=255)
                                         ccGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATAAGATCAGGAAATCGGCGAGAGATTTACCTTc                                                            >  1:1204118/1‑100 (MQ=255)
                                          cGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCt                                                           >  1:3456448/1‑100 (MQ=255)
                                            tGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGAttagatcggaag                                                         >  1:2456802/1‑90 (MQ=255)
                                             ggAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAACTCGTCGAGCGATTTACCTTCTGc                                                         >  2:2210917/1‑99 (MQ=255)
                                             ggAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGcc                                                        <  1:770419/100‑1 (MQ=255)
                                             ggAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGcc                                                        >  1:234292/1‑100 (MQ=255)
                                             ggAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGcc                                                        <  2:2920736/100‑1 (MQ=255)
                                              gAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCAGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCa                                                       >  2:2337789/1‑100 (MQ=255)
                                                aCCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAgc                                                     >  2:2779207/1‑100 (MQ=255)
                                                  cAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAgcgc                                                   >  2:752982/1‑100 (MQ=255)
                                                   aaCGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGcc                                                  <  1:991340/100‑1 (MQ=255)
                                                   aaCGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGcc                                                  >  1:323757/1‑100 (MQ=255)
                                                    aCGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCt                                                 <  2:599007/100‑1 (MQ=255)
                                                     cGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTg                                                <  2:1638194/100‑1 (MQ=255)
                                                      gAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGa                                               <  2:3415740/100‑1 (MQ=255)
                                                       aGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAg                                              <  2:1460760/100‑1 (MQ=255)
                                                        gCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGc                                             >  1:437581/1‑100 (MQ=255)
                                                         cTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCa                                            >  1:3304664/1‑100 (MQ=255)
                                                         cTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCa                                            >  1:1543230/1‑100 (MQ=255)
                                                           tGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCaa                                           >  2:3608340/1‑99 (MQ=255)
                                                            gagaAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAAtt                                         <  2:655140/100‑1 (MQ=255)
                                                             agaAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTg                                        <  1:3120861/100‑1 (MQ=255)
                                                              gaAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTgg                                       >  2:2633994/1‑100 (MQ=255)
                                                                aGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATAGTCGAGAGATTTAGCTTCTGCCAGCGCCTGAGCAATTgg                                       >  2:2055978/1‑98 (MQ=255)
                                                                 gCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCtt                                    >  1:222282/1‑100 (MQ=255)
                                                                  cGACGCCGGACGCGCCCTAGCAGCGACATCCGGCgtcgcttctcaagctcgttggttccacggcatcttatctaacaaccttgccattccacaaaaaccg                                   <  2:2071661‑M2/100‑67 (MQ=255)
                                                                  cGACGCCGGACGCGCCCTAGCAGCGACATCCGGCgtcgcttctcaagctcgttggttccacggcatcttatctaacaaccttgccattccacaaaaaccg                                   <  1:3052811‑M2/100‑67 (MQ=255)
                                                                  cGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCt                                     >  2:877999/1‑98 (MQ=255)
                                                                    aCGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCgg                                 >  2:1270377‑M1/2‑100 (MQ=255)
                                                                      gCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGgtg                               <  1:871408/100‑1 (MQ=255)
                                                                        cGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTa                             <  2:186088/100‑1 (MQ=255)
                                                                          gACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACg                           <  1:1706845/100‑1 (MQ=255)
                                                                            cgcgCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACg                           >  1:1101740/1‑98 (MQ=255)
                                                                               gcCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGccc                       >  1:720064/1‑99 (MQ=255)
                                                                                cccTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGCCCTg                     >  2:2957887/1‑100 (MQ=255)
                                                                                  cTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGCCCTg                     >  2:825540/1‑98 (MQ=255)
                                                                                  cTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGCCCTGAc                   >  1:1056248/1‑100 (MQ=255)
                                                                                   tAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGCCCTGAcc                  <  2:3313900/100‑1 (MQ=255)
                                                                                      cagcGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGCCCTGACCGGt               >  2:2744023/1‑100 (MQ=255)
                                                                                       agcGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGCCCTGACCGGTc              <  2:2427990/100‑1 (MQ=255)
                                                                                       agcGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGCCCTGACCGGTc              >  2:1973437/1‑100 (MQ=255)
                                                                                          gACATCCGGCCTCAGTACTTAGATCAGGCAACCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGTCCCTGACCGTTCCAg           >  1:3756839/1‑100 (MQ=255)
                                                                                          gACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGCCCTGACCGGTCCAg           <  2:421323/100‑1 (MQ=255)
                                                                                          gACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGCCCTGACCGGTCCAg           >  2:285985/1‑100 (MQ=255)
                                                                                          gACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGCCCTGACCGGTCCAg           >  1:690967/1‑100 (MQ=255)
                                                                                           aCATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGCCCTGACCGGTCCAgg          <  2:515673/100‑1 (MQ=255)
                                                                                            cATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGCCCTGACCGGTCCAGGt         >  2:3010628/1‑100 (MQ=255)
                                                                                              tCCGGCgtcgcttctcaagctcgttggttccacggcatcttatctaacaaccttgccattccacaaaaaccgctgattcctgcaaacagtaacccggcac       >  1:3003872‑M2/1‑6 (MQ=255)
                                                                                              tCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGCCCTGACCGGTCCAGGttt       >  2:3045896/1‑100 (MQ=255)
                                                                                               ccGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGCCCTGACCGGTCCAGGtttt      >  2:382795/1‑100 (MQ=255)
                                                                                               ccGGCCCCCGTCATCAGATCAGGAACCCGTCGGCCGATTTACCTGCTGCCAGCGCCTGACCGCTTGCCCTCGGTGTACGGCCCTGACCGGTCCAGGtat       >  1:1937895/1‑97 (MQ=255)
                                                                                                 ggCgtcgcttctcaagctcgttggttccacggcatcttatctaacaaccttgccattccacaaaaaccgctgattcctgcaaacagtaacccggcaccaa    <  2:1340944‑M2/100‑98 (MQ=255)
                                                                                                 ggCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGCCCTGACCGGTCCATGTTTTat    <  1:551933/100‑2 (MQ=255)
                                                                                                 ggCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGCCCTGACCGGTCCAGGTTTTAg    <  2:1564059/100‑1 (MQ=255)
                                                                                                   cgtcgcttctcaagctcgttggttccacggcatcttatctaacaaccttgccattccacaaaaaccgctgattcctgcaaacagtaacccggcaccaaca  >  1:3705415‑M2/1‑1 (MQ=255)
                                                                                                   |                                                                                                   
TCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGCCCTGACCGGTCCAGGTTTTAGTT  >  NC_000913/2797983‑2798181

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.