Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,835,622 G→A 100% R36R (CGG→CGA)  ynjA → carboxymuconolactone decarboxylase family protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,835,6220GA98.3% 487.6 / ‑3.0 152R36R (CGG→CGA) ynjAcarboxymuconolactone decarboxylase family protein
Reads supporting (aligned to +/- strand):  ref base G (1/3);  new base A (67/80);  total (69/83)
Fisher's exact test for biased strand distribution p-value = 6.28e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 152 total aligned reads displayed.

GCCGCTTAGCAAAATTCCTTTAATTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGGATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACGCTCACCGCTCGATCCGGTAGTACGATCGCTTGTCAGCGC  >  NC_000913/1835526‑1835717
                                                                                                |                                                                                               
gccgcTTATCAAAATTCCTTTAATTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATc                                                                                              <  1:3274607/100‑1 (MQ=255)
 ccgcTTAGCAAAATTCCTTTAATTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATcc                                                                                             >  1:3000232/1‑100 (MQ=255)
  cgcTTAGCAAAATTCCTTTAATTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATccc                                                                                            >  2:597731/1‑100 (MQ=255)
  cgcTTAGCAAAATTCCTTTAATTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGAGGGCGAATccc                                                                                            >  2:3142981/1‑100 (MQ=255)
    cTTAGCAAAATTCCTTTAATTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGt                                                                                          <  1:1071202/100‑1 (MQ=255)
      tAGCAAAATTCCTTTAATTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGGATCCCGttt                                                                                        <  2:2124431/100‑1 (MQ=255)
       aGCAAAATTCCTTTAATTTTACGTCCACAGGCGTGGCTGTATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGttta                                                                                       <  2:1758053/100‑1 (MQ=255)
        gCAAAATTCCTTTAATTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGtttat                                                                                      >  2:789895/1‑100 (MQ=255)
        gCAAAATTCCTTTAATTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGtttat                                                                                      >  2:747011/1‑100 (MQ=255)
           aaaTTCCTTTAATTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGtttatctt                                                                                   <  1:2871027/100‑1 (MQ=255)
            aaTTCTTTTAATTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGtttatcttt                                                                                  <  2:1170529/100‑1 (MQ=255)
            aaTTCCTTTAATTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGtttatcttt                                                                                  <  2:2501413/100‑1 (MQ=255)
             attaaaggaaTTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGtttatctttt                                                                                 >  1:1326515/9‑100 (MQ=255)
                 cTTTAATTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGGATCCCGtttatcttttatct                                                                             >  1:363052/1‑100 (MQ=255)
                 cTTTAATTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGtttatcttttatct                                                                             >  2:3236556/1‑100 (MQ=255)
                 cTTTAATTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGtttatcttttatct                                                                             >  2:2370061/1‑100 (MQ=255)
                 cTTTAATTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGtttatcttttatct                                                                             >  1:194500/1‑100 (MQ=255)
                  tttAATTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTATGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGTGCGAATCCCGtttatcttttatctn                                                                            <  1:1741171/100‑2 (MQ=255)
                  tttAATTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTg                                                                            >  2:269196/1‑100 (MQ=255)
                   ttAATTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTgg                                                                           <  1:1045654/100‑1 (MQ=255)
                   ttAATTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTgg                                                                           <  2:2942769/100‑1 (MQ=255)
                   ttAATTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTgg                                                                           <  1:2613184/100‑1 (MQ=255)
                   ttAATTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTgg                                                                           <  1:2448699/100‑1 (MQ=255)
                   ttAATTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTgg                                                                           <  1:1202109/100‑1 (MQ=255)
                   ttAATTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATGACGGCGATGTGCTAAGCCACATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTgg                                                                           <  1:1835690/100‑1 (MQ=255)
                     aaTTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGgtg                                                                         <  2:1030842/100‑1 (MQ=255)
                      aTTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGgtgt                                                                        <  2:2768166/100‑1 (MQ=255)
                      aTTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGAGCTAAGCCCCATTCGCTCGTGGGGGCGAATCCCGTTTATCTTTTATCTGgtgt                                                                        >  2:1745982/1‑100 (MQ=255)
                       ttttACGTCCACAGGCGTGGCTGCATCGTCGCTATTACGCCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTc                                                                       <  1:2669552/100‑1 (MQ=255)
                       ttttACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTc                                                                       >  2:2717878/1‑100 (MQ=255)
                       ttttACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTc                                                                       <  2:1881061/100‑1 (MQ=255)
                       tgttACGTCGAGAGGCGTGGCTGCATCTCCGTTCTTAGGGCCAGTTGTTAAGCCCCATTCGCTGGTGGCGGCGAATCCCGTTTATCTTTTATCTgg                                                                           <  1:2356293/94‑1 (MQ=255)
                        tttACGTCCACAGGCGTGGCTGCATCGTTGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGgtg                                                                         <  1:3391423/97‑1 (MQ=255)
                          tACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCTCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGAt                                                                    <  1:3363171/100‑1 (MQ=255)
                          tACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGAt                                                                    >  2:2774896/1‑100 (MQ=255)
                           aCGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGAtg                                                                   <  1:2096513/100‑1 (MQ=255)
                           aCGTCCACACGCGTGGCTGCATCGTCGCCATTACGGCGAGTTGCTAAGCCCCATTCGCTGGTGGGTGCGAATCCCGTTTATCTTTTATCTGGTGTCGAtg                                                                   <  1:2746242/100‑1 (MQ=255)
                            cGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGAtgt                                                                  >  1:876827/1‑100 (MQ=255)
                            cGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGATGGTGGGGGCGAATCCCGTCTATCGTTTATCTGGTGTCGAtg                                                                   >  1:2433143/1‑99 (MQ=255)
                              tCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGAtgttt                                                                >  1:2176554/1‑100 (MQ=255)
                               ncacaGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGAtgtttg                                                               >  1:2782139/2‑100 (MQ=255)
                               cgacaGGCGTGGCTGCATCGTCGCCATTAGTGGTACGTGCTAAGTCCCAGTCGCTGGTGGGGGCGAACCCCGTTTATCTTTTATCTGGTGTCGAtgtttg                                                               <  1:1575566/98‑1 (MQ=255)
                               ccACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGAtgtttg                                                               <  2:1158676/100‑1 (MQ=255)
                                 acaGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGAtgtttgtt                                                             <  2:2421504/100‑1 (MQ=255)
                                   aGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTtgg                                                           <  2:740185/100‑1 (MQ=255)
                                    ggCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGCATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTtggc                                                          >  1:89453/1‑100 (MQ=255)
                                    ggCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTtggc                                                          <  1:2894255/100‑1 (MQ=255)
                                    ggCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTtggc                                                          <  1:1340178/100‑1 (MQ=255)
                                        tGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTtggctggc                                                      <  1:399665/100‑1 (MQ=255)
                                         ggCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTggctggct                                                     >  1:3687771/1‑100 (MQ=255)
                                         ggCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTggctggct                                                     >  2:223114/1‑100 (MQ=255)
                                           cTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGctggctgg                                                   >  1:2947240/1‑100 (MQ=255)
                                            tGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGctggctgg                                                   >  1:700037/1‑99 (MQ=255)
                                            tGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGa                                                  <  2:3759131/100‑1 (MQ=255)
                                             gCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAg                                                 <  2:2849506/100‑1 (MQ=255)
                                             gCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAg                                                 <  1:2038564/100‑1 (MQ=255)
                                              cATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAgc                                                <  2:3561852/100‑1 (MQ=255)
                                               aTCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAgcg                                               >  2:1888903/1‑100 (MQ=255)
                                                tcgtcgCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAgcgc                                              <  2:610786/100‑1 (MQ=255)
                                                    cgCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAAc                                          <  2:1938869/100‑1 (MQ=255)
                                                     gCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACg                                         <  2:3208442/100‑1 (MQ=255)
                                                     gCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACg                                         >  1:1066237/1‑100 (MQ=255)
                                                      ccATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACg                                         >  1:1692239/1‑99 (MQ=255)
                                                      ccATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACGc                                        <  2:3699489/100‑1 (MQ=255)
                                                      ccATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACGc                                        <  1:3156577/100‑1 (MQ=255)
                                                        aTTACCGCGAGGTGCTACGCCCCATTCGCTGGTGGGGGCGAAGCCCGTGCTTCTTTTGTCTGGTGTCGATGTTTGTTGGCTGGCCGCTGCGCCAACGc                                        >  1:2628894/1‑98 (MQ=255)
                                                         ttACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACGCTc                                      <  1:2197168/99‑1 (MQ=255)
                                                          tACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACGCTCAc                                    <  2:2727673/100‑1 (MQ=255)
                                                          tACGGCGAGGTGCTAAGCACCATTCGCTGGTGGGGGAGAATCCCGTTTATCTTTTATTTGGTGTTGATGTTTGTTGGCTGGCTGGAGCGCAAAAGCTc                                      >  1:1816538/1‑98 (MQ=255)
                                                              gCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACGCTCACCGCt                                <  2:2629498/100‑1 (MQ=255)
                                                                  ggTGCTAAGGCCTATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAACCGCTCACCGCTCg                              <  1:3697090/98‑1 (MQ=255)
                                                                   gTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACGCTCACCGCTCGATc                           <  1:472509/100‑1 (MQ=255)
                                                                   gTGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACGCTCACCGCTCGATc                           >  1:3145598/1‑100 (MQ=255)
                                                                    tGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACGCTCACCGCTCGATcc                          <  1:3478096/100‑1 (MQ=255)
                                                                    tGCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACGCTCACCGCTCGATcc                          >  1:769113/1‑100 (MQ=255)
                                                                     gCTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACGCTCACCGCTCGATCCg                         >  1:3776598/1‑100 (MQ=255)
                                                                      cTAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACGCTCACCGCTCGATCCgg                        >  2:2518966/1‑100 (MQ=255)
                                                                       tAAGCCCCATTCGCTGGTGGGGGGGAATCCCGGTTATCTTTTATCTGGTGCCGATGTTTGTTGGCTGGCTGGAGCGCAAACGCTCACCGCTCGATCCGgt                       <  1:1430819/100‑1 (MQ=255)
                                                                       tAAGCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACGCTCACCGCTCGATCCGgt                       >  2:1043845/1‑100 (MQ=255)
                                                                        aagcgtcATTCGCTGGGGGGGGGCGAGCCCGTTAAGCTGTTATCTGGTTTCGATGTTGGTTGGCTGGCTGGAGCGCAAACGCGCACCGCTCGATCCGgt                       <  1:3303557/93‑1 (MQ=255)
                                                                          gCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCACACGCTCACCGCTCGATCCGgt                       >  2:2908532/1‑97 (MQ=255)
                                                                          gCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACGCTCACCGCTCGATCCGgtagt                    >  1:2738464/1‑100 (MQ=255)
                                                                          gCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACGCTCACCGCTCGATCCGgtagt                    >  2:2029699/1‑100 (MQ=255)
                                                                          gCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACGCTCACCGCTCGATCCGgtagt                    >  2:1403885/1‑100 (MQ=255)
                                                                          gCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACGCTCACCGCTCGATCCGgtagt                    >  2:1515097/1‑100 (MQ=255)
                                                                          gCCCCATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACGCTCACCGCTCGATCCGgt                       >  1:2289040/1‑97 (MQ=255)
                                                                           ccccATGCGATGGTGGGGGGGAATGTCGTTTACCTTTTATCTGGTGTCGATGATTGTTGGCTGGCTGGAGCGCAAACGCTCACCGCTCGATCCGgtaa                     <  1:1017191/98‑2 (MQ=255)
                                                                            cccATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACGCTCACCGCTCGATCCGGTAGTAc                  <  2:1984401/100‑1 (MQ=255)
                                                                            cccATTCGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACGCTCACCGCTCGATCCGGTAGTAc                  <  1:3335396/100‑1 (MQ=255)
                                                                                  cGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACGCTCACCGCTCGATCCGGTAGTACGATCGc            >  2:1385494/1‑100 (MQ=255)
                                                                                  cGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACGCTCACCGCTCGATCCGGTAGTACGATCGc            >  1:3532587/1‑100 (MQ=255)
                                                                                  cGCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACGCTCACCGCTCGATCCGGTAGTACGATCGc            >  1:2539882/1‑100 (MQ=255)
                                                                                   gCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACGCTCACCGCTCGATCCGGTAGTACGATCGCt           >  2:1448651/1‑100 (MQ=255)
                                                                                   gCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACGCTCACCGCTCGATCCGGTAGTACGATCGCt           >  2:3761574/1‑100 (MQ=255)
                                                                                   gCTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACGCTCACCGCTCGATCCGGTAGTACGATCGCt           <  1:2820250/100‑1 (MQ=255)
                                                                                    cTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACGCTCACCGCTCGATCCGGTAGTACGATCGCtt          >  1:1979393/1‑100 (MQ=255)
                                                                                    cTGGTGGGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACGCTCACCGCTCGAGCCGGTAGTACGATCGCtt          <  1:1254909/100‑1 (MQ=255)
                                                                                     tggtggGGGCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACGCTCACCGCTCGATCCGGTAGTACGATCGCTTg         <  2:2058899/100‑1 (MQ=255)
                                                                                           gggCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACGCTCACCGCTCGATCCGGTAGTACGATCGCTTGTCAgcg   >  2:1773219/1‑100 (MQ=255)
                                                                                            ggCGAATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAGACTCTCACCGCTCGATCCGGTAGTACGATCGCTTGTCAgcgc  >  1:2663531/1‑100 (MQ=255)
                                                                                                |                                                                                               
GCCGCTTAGCAAAATTCCTTTAATTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGGATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACGCTCACCGCTCGATCCGGTAGTACGATCGCTTGTCAGCGC  >  NC_000913/1835526‑1835717

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑