| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,706,048 | G→T | 22.8% | intergenic (‑258/+50) | dppB ← / ← dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,706,048 | 0 | G | T | 22.8% | 523.8 / 128.4 | 215 | intergenic (‑258/+50) | dppB/dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Reads supporting (aligned to +/- strand): ref base G (79/82); new base T (47/2); total (131/84) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.88e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 220 total aligned reads displayed.
GCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAACC > NC_000913/3705950‑3706146 | gcgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGa > 1:1695818/1‑100 (MQ=255) gcTTTGTTTATGCCGTATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCATGCAAATTCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGa < 1:845356/98‑1 (MQ=255) gcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAgc < 2:1180077/100‑1 (MQ=255) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAgcg < 2:1907433/100‑1 (MQ=255) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAgc < 1:1219329/99‑1 (MQ=255) tGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCAt < 1:3753949/100‑1 (MQ=255) tGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCAt < 2:2250984/100‑1 (MQ=255) ttgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAATCGTGCTAATTCAATATATTGCA‑GA‑AACC‑TT‑‑GTAGGCCTGATAAGCGTAGCGCATc > 1:1135662/7‑100 (MQ=18) ttATGCCGTATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAg < 2:615806/100‑1 (MQ=255) gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGCA‑GG‑ACCA‑T‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAg > 1:1949991/5‑100 (MQ=18) gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑‑AAATCATGCAAATCCAAAATATTGCA‑GG‑AGTT‑AT‑‑GTAGGCCTGATAAGCGTAGCGCATCAgg > 2:3120682/5‑100 (MQ=21) tATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAgg > 1:1550646/1‑100 (MQ=255) aggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCGTGCAAATTCAATACATTGCA‑TG‑GGCC‑AT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 1:3201060/3‑100 (MQ=17) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAGCACGCAAACTCAATATATTGCA‑GAGATCA‑T‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 2:3365943/3‑100 (MQ=17) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACTTTGCAAATTCAATATATTGCA‑AT‑CTCC‑GT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 1:722526/3‑100 (MQ=18) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACTGTGCAAATTCAATATATTGCA‑GG‑AAAC‑AC‑‑GTAGGCCTGATAAGCGAAGCGCATCAGGc > 2:1029086/3‑100 (MQ=18) aggCCGGATAAGGCGTTAACGCCGCATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGc > 2:2151747/3‑100 (MQ=18) ggcaggataaggcgTTCACGCCGCATCCTGCCTAC‑AAAAGCACGCAAATTCAATATATTGCA‑GA‑GATG‑GC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:1258959/11‑100 (MQ=14) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCGTGCAAATTCAATACATTGCATGG‑GCCA‑T‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:471172/2‑100 (MQ=17) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAATTCAATATATTGCA‑CC‑ATCC‑TC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:1784483/2‑100 (MQ=21) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAATTCAATATATTGCA‑CC‑ATCC‑TC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaa > 1:3347711/1‑99 (MQ=21) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAGCACGCAAACTCAATATATTGCA‑GAGATCA‑T‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaa > 2:3302709/1‑99 (MQ=17) ccggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAATTCAATATATTGCA‑CC‑ATCC‑AC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaa > 2:939175/9‑98 (MQ=18) ccGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGCA‑GG‑ACCA‑T‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCagt > 1:929404/1‑98 (MQ=18) cggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAACTTTGCAAATTCAATATATTGC‑‑‑A‑ATCT‑CCGTGTAGGCCTGATAAGCGTAGCGCATCAGGCaatt > 2:335103/8‑97 (MQ=18) cGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAttt > 2:2844637/1‑100 (MQ=255) ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAGATCGTGCAAATTCAATATATTGCA‑TG‑AGCC‑AC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 1:2524882/7‑100 (MQ=17) ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAATTCAATATATTGCA‑CC‑ATCC‑TC‑‑GTAGGCCTGATAAGCGTAGCGCATCGGGCaattc > 2:635156/7‑96 (MQ=21) ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAAGCACGCAAACTCAATATATTGCA‑GAGATCA‑T‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAattt > 2:3181850/7‑100 (MQ=17) ggataaggcgTTCACGCCGCATCCAGCCTAC‑AAAATTGTGCAAAATCAATGGATTGCA‑CA‑GCTA‑GC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCagatt > 1:2434254/7‑96 (MQ=25) ggATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAtttt > 1:1090170/1‑100 (MQ=255) taggcaaacatcacttcgaaaacgtctttatcgaataattaaaagccatacaagactgatggcaaaggcaaaaatGCCTGATAAGCGGAGCGCATCAGGc > 1:1390709‑M1/76‑100 (MQ=255) gataaggcgTTTACGCCGCATCCGGCCTAC‑AAATTC‑TGCAAATTCAACAAATTGC‑‑GA‑ATCCCTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAtttgcg > 1:3655984/6‑97 (MQ=21) gataaggcgTTTACGCCGCATCCGGCCTAC‑AAAACAGTGCAAATTCAATATATTGCA‑AT‑CTTC‑TG‑‑GTAGGCCTGATAAGCATCGCGCATCAGGCaagctt > 2:3568092/6‑95 (MQ=21) aTGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 1:1032340/100‑1 (MQ=255) aTGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 2:70289/100‑1 (MQ=255) taaggcgTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGCA‑GA‑GTTC‑AC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAGTtttgc > 2:2685643/4‑100 (MQ=17) gctcgTTAACGGCGTATGCGGCCTAC‑AAAATCTTGCACAGTCAATACATTGCA‑GA‑GTTT‑TC‑‑GTATGCCTGATAAGCGGAGCGCATCAGGCATGtttgc < 1:3087845/95‑1 (MQ=17) cggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcct > 2:151445/1‑100 (MQ=255) gcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgccttt < 2:1597117/100‑1 (MQ=255) aacatcacttcgaaaacgtctctatcgaataattaaaagccatacaagactgatggcaaaggcaaaaatGCCTGATAAGCGGAGCGCATCAGGCAttttt > 1:179055‑M1/70‑100 (MQ=255) cgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttg > 2:3285306/1‑100 (MQ=255) acatcacttcgaaaacgtctctatcgaataattaaaagccatacaagactgatggcaaaggcaaaaatGCCTGATAAGCGGAGCGCATCAGGCATTtttg > 1:3021037‑M1/69‑100 (MQ=255) acatcacttcgaaaacgtctctatcgaataattaaaagccatacaagactgatggcaaaggcaaaaatGCCTGATAAGCGGAGCGCATCAGGCATTtttg > 1:2595677‑M1/69‑100 (MQ=255) ttAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttgcc < 2:2016149/100‑1 (MQ=255) aCGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATc < 2:2523203/100‑1 (MQ=255) aCGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATc < 2:3495213/100‑1 (MQ=255) cGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATc > 1:3679804/1‑99 (MQ=255) ccTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑ATCT‑TC‑‑GTGGCCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGt > 1:164981/1‑100 (MQ=255) tATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCtt > 2:194285/1‑100 (MQ=255) tATCCGGACTAC‑AAAATCGTGCAAATTCAATCCATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCt < 1:535698/99‑1 (MQ=255) ggCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATg > 1:396405/1‑100 (MQ=255) ggCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATg < 1:2333133/100‑1 (MQ=255) ggCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATg > 2:1337342/1‑100 (MQ=255) ccTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGc < 2:2366167/100‑1 (MQ=255) tAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCtt < 2:1478849/100‑1 (MQ=255) ac‑acAATCGTGCAAATTCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCTTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCtt < 1:2758435/99‑1 (MQ=255) aC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCttt > 2:984993/1‑100 (MQ=255) aaaTCGTGCAAATTCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTa > 1:3335552/1‑99 (MQ=255) tCGTGCAAATTCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAatta < 2:2307533/100‑1 (MQ=255) tGCAAATTCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTc < 2:1067822/100‑1 (MQ=255) tGCAAATGCAATACATTGCA‑GA‑ATTT‑TA‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTACCATCAGTCTTGTATGGCTTTTAATTATTc < 1:2252360/100‑1 (MQ=255) gCAAATTCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCg < 1:3550230/100‑1 (MQ=255) aTTCAATACATTGTA‑GA‑ATTT‑TC‑‑GTAGCTCTGATAAGCGGATCGTATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGTCTTTTAATTATTc < 1:2350371/95‑1 (MQ=37) ttCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATaga > 2:1874643/1‑100 (MQ=255) ttCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATaga < 2:882728/100‑1 (MQ=255) ttCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATaga < 1:1297889/100‑1 (MQ=255) cATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGttt > 1:2555635/1‑100 (MQ=255) ttGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTc < 1:265547/100‑1 (MQ=255) a‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAg < 1:1335982/100‑1 (MQ=255) gA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGt > 2:881959/1‑100 (MQ=255) gA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGt < 1:198666/100‑1 (MQ=255) aTTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGa < 1:66391/100‑1 (MQ=255) tC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGtt < 1:2844620/100‑1 (MQ=255) tC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGtt > 2:3051554/1‑100 (MQ=255) c‑‑GTAGGCTTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGttt < 1:555104/100‑1 (MQ=255) gTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTg < 1:3483059/100‑1 (MQ=255) aGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGcc < 1:1400031/100‑1 (MQ=255) ggCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCt > 2:969394/1‑100 (MQ=255) ggCCTGATAAGCGGAGCGCATCAGGCATTTATGACTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCt > 1:2501592/1‑100 (MQ=255) ccTGATAAGCGGAGCGCATCAGGCATTTTTTTTTTTTTTTTCAGTCTTGTATGGCTTTTAATTATTCTTTAGAGAAGTTTTCGAAGTGATGTTTGCCt > 1:770004/1‑98 (MQ=25) CCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTaa < 2:2873811‑M1/100‑1 (MQ=255) CTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAAt < 2:1638078‑M1/100‑1 (MQ=255) CTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAAt > 2:3732197‑M1/1‑100 (MQ=255) CTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAAt > 2:608271‑M1/1‑100 (MQ=255) TGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTGGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATg < 1:1866607‑M1/100‑1 (MQ=255) TGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATg > 1:3452776‑M1/1‑100 (MQ=255) gATAAGCGGAGCGCATCAGGCATTTTTTTTTTTTTTATCAGTCTTGTATGGCTTTTAATTATTTTATAGAGACGTTTTCGAAGTGATGTTTGCCTAAt > 1:1230176/1‑98 (MQ=255) GATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATgg > 2:1401882‑M1/1‑100 (MQ=255) GATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATgg > 1:2198281‑M1/1‑100 (MQ=255) GATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATgg < 2:772033‑M1/100‑1 (MQ=255) GATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATgg > 2:2816142‑M1/1‑100 (MQ=255) TAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGAt < 2:1611590‑M1/100‑1 (MQ=255) aaGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATc < 2:1695825/100‑1 (MQ=255) aGCGGAGCGCATCAGGCAGTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGGTAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCa > 1:749820/1‑100 (MQ=255) cGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAAc < 1:2167308/100‑1 (MQ=255) cGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAAc < 2:396407/100‑1 (MQ=255) cGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAAc > 2:3526130/1‑100 (MQ=255) ggAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAAcc < 2:1163944/100‑1 (MQ=255) ggAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAAcc < 1:2823039/100‑1 (MQ=255) | GCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑ATTT‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAACC > NC_000913/3705950‑3706146 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |