| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,060,264 | A→C | 15.9% | intergenic (+34/‑183) | typA → / → yihL | GTP‑binding protein/putative DNA‑binding transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,060,264 | 0 | A | C | 15.9% | 387.2 / 61.8 | 154 | intergenic (+34/‑183) | typA/yihL | GTP‑binding protein/putative DNA‑binding transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (50/78); new base C (17/8); total (68/86) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.41e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 157 total aligned reads displayed.
TCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTG > NC_000913/4060167‑4060364 | tCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATg < 2:2647825/100‑1 (MQ=255) cGTAAACGTCTCCGGACTGAAAACGATCGTCGCCGCGTCAACCGCGAACAGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATgg < 1:939713/100‑1 (MQ=255) cGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATgg < 1:296206/100‑1 (MQ=255) gTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGc > 1:2450290/1‑100 (MQ=255) gTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCAAGCGATTGc > 1:1694109/1‑100 (MQ=255) tAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCa < 2:788715/100‑1 (MQ=255) aaaCGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAg < 1:3663582/100‑1 (MQ=255) aaCGTCACCTGACGGAAAACGATCGTCGCCGCGGCAACCGCGCAACGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAgg < 1:2874791/100‑1 (MQ=255) aaCGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAgg > 2:638166/1‑100 (MQ=255) aaCGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAgg < 2:2515017/100‑1 (MQ=255) aCGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAGGt < 2:2480159/100‑1 (MQ=255) cGTCACCTAACGAAAAACGATCGTCACCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGt < 1:3470902/99‑1 (MQ=255) gTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGttt < 2:81342/100‑1 (MQ=255) gTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTCAGTCATAAAAAACCTGCCAGCGATGGCAGGttt < 1:2275437/100‑1 (MQ=255) tCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGtttt > 2:1659146/1‑100 (MQ=255) cACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGttttt > 2:116685/1‑100 (MQ=255) aCCTGACGGAAAACGATCGTCTCCGCTCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAATACCTGCCATCGCTGGCAGGtttttt < 1:2549523/100‑1 (MQ=38) aCCTGACGGAAAACGATCGTCGCCGCGTCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGttttt < 1:724173/99‑1 (MQ=255) aCCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGtttttt > 2:3050261/1‑100 (MQ=255) aCCTGACAGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGtttttt > 2:1995250/1‑100 (MQ=255) ccTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGGTTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGttttttt > 1:2979854/1‑100 (MQ=255) ccTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAGGtttttta < 2:2633037/100‑2 (MQ=255) cTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAGGttttttat < 1:2521170/100‑3 (MQ=255) cTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGtttttttt < 2:3385522/100‑1 (MQ=255) cTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGtttttttt > 1:224608/1‑100 (MQ=255) cTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGtttttttt > 2:1592002/1‑100 (MQ=255) tGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGttttttttg < 2:1406745/100‑2 (MQ=255) gACGGAAAACGATTGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGttttttttgc < 1:1231200/100‑3 (MQ=255) gACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGttttttttgc < 1:210411/100‑3 (MQ=255) aCGGAAACCGATCGTTGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGttttttttgcc < 1:1623966/100‑4 (MQ=255) aCGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGttttttttgcc < 2:2026149/100‑4 (MQ=255) aCGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGttttttttgcc < 1:1240980/100‑4 (MQ=255) aCGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGttttttttgcc < 1:1429259/100‑4 (MQ=255) aCGGAAAACGATCGTCGCCGCGCCAACCGCCCACCTAAAGACGTTTAATTTCGTTTTTTAGTCATAACCAACCTGCCCGCGATGGCAGGttttttttgcc < 1:1428271/100‑4 (MQ=255) cGGAAAACGATCGTCGTCGCGCAAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTTATAAAAAACCTGCCAGCGATGGCAGGtgttttttgact > 1:439016/1‑96 (MQ=255) cGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGttttttttgcct > 2:1806930/1‑96 (MQ=255) ggAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTg > 2:3461212/1‑100 (MQ=255) ggAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTg > 2:3142401/1‑100 (MQ=255) gAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGt < 2:3296361/100‑1 (MQ=255) aaaCGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCg < 2:898084/100‑1 (MQ=255) aaCGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGt < 1:1058065/100‑1 (MQ=255) cGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGa < 1:369105/100‑1 (MQ=255) cGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGa > 1:545495/1‑100 (MQ=255) cgtcgCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTATTCATAAGAAACCTACCAGCGGTGGCACGttttttttgacggtc > 1:3755111/1‑85 (MQ=255) cgtcgCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAgcgc < 1:108956/100‑1 (MQ=255) gccgcGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGcaca < 1:2357205/99‑1 (MQ=255) gccgcGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGCCGTGAGCGcactc < 2:2581579/100‑3 (MQ=255) ccgcGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACAcc < 1:638162/100‑1 (MQ=255) gcCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATg > 2:3688041/1‑100 (MQ=255) gcCAACCGCGCACCGAAAGACGATTAATTGCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGTCAGG‑TTTGTTTTGCCTGTCGTGAGCGCACACCATTg < 1:3218264/100‑1 (MQ=255) cAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCg > 2:3503853/1‑100 (MQ=255) aaCCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGa < 2:1947075/100‑1 (MQ=255) aCCGCGCACCGAAAGACGATTAATTTCGGTTTTTAGTCATAAAAAACCTGCCACCGCTGGCAGGTTTTTTTTT‑CCTGTCGTGAGCGCACACCAATGCGa > 1:3153330/1‑99 (MQ=38) cgcgCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTa < 1:2664895/100‑1 (MQ=255) gcACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGGAtct > 2:3618613/1‑100 (MQ=255) cACCGAAAGACGATTAATTTCGGTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTTGTGAGCGCACACCAATGCGAGTAtctc < 2:3036015/100‑1 (MQ=255) aCCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTcc < 2:1477698/100‑1 (MQ=255) ccGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTccc < 2:2929053/100‑1 (MQ=255) ccGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTccc > 2:534298/1‑100 (MQ=255) cGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCt < 2:3649360/100‑1 (MQ=255) gAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCtt < 2:1907225/100‑1 (MQ=255) gAAAGACGATCAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTTTCCTGAGCGCACACCAATGCGAGTATCTCCCtt < 1:2492779/100‑1 (MQ=255) aaGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTtat > 2:1793207/1‑100 (MQ=255) cGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGt > 1:963189/1‑100 (MQ=255) gATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTc > 2:226040/1‑100 (MQ=255) aTTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGGAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCt < 1:2664998/100‑1 (MQ=255) aTTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGCGTATCTCCCTTATAAGTCt > 1:2414456/1‑100 (MQ=255) aaTTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCtgtg < 2:311238/100‑1 (MQ=255) aTTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTgg < 2:1919646/100‑1 (MQ=255) tggcGTTTGTAAGTAATAAACGACCGGCGAGCGATGGCAGG‑GTTTTTTTGCCTGTCGTGAGCGCACCCCAATGCGCGTATCTCCCTTATAAGTCTGTgg < 1:3276358/96‑1 (MQ=255) ttCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGTGAGTATCTTCCTTATAAGTCTGTGttt > 1:2359799/1‑100 (MQ=255) ttCATTTTTTAGTCATAAAAACCCTGCCAGCGATCCCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATATGTCTGTgg < 1:839190/98‑1 (MQ=255) tAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATa < 1:3510493/100‑1 (MQ=255) aGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATag > 1:3676477/1‑100 (MQ=255) gTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATaga > 2:3314854/1‑100 (MQ=255) taaTAAAAAACCTCCCAGCGATGGCAGG‑TTTATTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATagag > 2:2565147/3‑100 (MQ=255) tCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATa < 2:2420544/97‑1 (MQ=255) gcaaaaaaaaCCTGCCATCGCTGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATagag > 2:2911174/5‑100 (MQ=38) caaaaaaaaCCTGCCATCGCTGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATagaga > 2:376436/4‑100 (MQ=38) caaaaaaaaCCTGCCATCGCTGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATagaga > 2:449020/4‑100 (MQ=38) caaaaaaaaCCTGCCATCGCTGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATagaga > 1:988077/4‑100 (MQ=38) cATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCATTATAAGTCTGCGGTTACGTCAATagaga > 1:929086/1‑100 (MQ=255) aTAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATagagag < 1:1926350/100‑1 (MQ=255) aTAAAAAACCTGCCAGCGATGGCA‑GTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATagaga < 1:893920/99‑1 (MQ=255) aaaaaaaCCTGCCATCGCTGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGc > 1:2031204/2‑100 (MQ=38) aaaaaaaCCTGCCATCGCTGGCAGG‑TTTTTTTTGCCTATCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGc > 1:2023127/2‑100 (MQ=38) aaaaaaaCCTGCCATCGCGGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATGAGTCTGTGGTTACGTCAATAGAGAGc > 2:1384051/2‑100 (MQ=38) aaaaaCCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGc > 1:600818/1‑98 (MQ=255) aaaaCCTGCCATCGCTGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCttt > 2:2479143/1‑100 (MQ=39) aaaCCTGCCATCGCTGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTg > 2:1701890/1‑100 (MQ=39) aCCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTc < 2:2961005/100‑1 (MQ=255) aCCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTc < 1:483109/100‑1 (MQ=255) ccTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTca > 2:1230430/1‑100 (MQ=255) tGCCAGCGATGGCAGG‑TTTTTTTTGTTTTTTTTTAGCGCACACCAATGCGAGTATTTCCTTTATAAGTCTGTGGTTACGTCTATAGAGCGCTTTATcaca > 1:3391576/1‑100 (MQ=255) gCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACaa > 2:3612806/1‑100 (MQ=255) ccAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAAt < 2:1730968/100‑1 (MQ=255) cGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATc < 1:2825446/100‑1 (MQ=255) aTGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTg < 2:600752/100‑1 (MQ=255) aTGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTg < 1:1869950/100‑1 (MQ=255) aTGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTg < 1:1736344/100‑1 (MQ=255) | TCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTG > NC_000913/4060167‑4060364 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |