Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,304,813 (C)7→6 coding (1005/1245 nt) mtr ← tryptophan transporter of high affinity

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,304,8070C.99.3% 644.4 / ‑1.3 142coding (1011/1245 nt)mtrtryptophan transporter of high affinity
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base . (68/72);  total (70/72)
Fisher's exact test for biased strand distribution p-value = 4.89e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.77e-01

Only 100 of 162 total aligned reads displayed.

CGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTCAA  >  NC_000913/3304708‑3304901
                                                                                                   |                                                                                              
cgATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGc                                                                                                <  1:1334014/100‑1 (MQ=255)
 gATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGcc                                                                                               >  1:1234891/1‑100 (MQ=255)
   tGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGcccc                                                                                             >  1:3115478/1‑100 (MQ=255)
   tGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGcccc                                                                                             >  2:2047260/1‑100 (MQ=255)
   tGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGcccc                                                                                             >  1:139599/1‑100 (MQ=255)
    gCACGGGCTAACAGCGCCGGAACAATTTCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGccccc                                                                                            >  2:2824050/1‑100 (MQ=255)
    gCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGccccc                                                                                            >  1:3607058/1‑100 (MQ=255)
     cACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGcccccc                                                                                           <  2:4032784/100‑1 (MQ=255)
     cACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGcccccc                                                                                           <  2:1197110/100‑1 (MQ=255)
     cACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAAACAATGGCGTACAGGAATCCGTTCGGGAACAACAGccccac                                                                                           >  1:2042825/1‑98 (MQ=255)
     cACGGGCTAACAGCGCCGGAACAATCGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGcccccc                                                                                           <  1:2273632/100‑1 (MQ=255)
      aCGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGcccccca                                                                                          >  2:1066154/1‑99 (MQ=255)
       cGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGccccccac                                                                                         <  1:3032396/100‑3 (MQ=255)
       cGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGccccccac                                                                                         >  2:3769962/1‑98 (MQ=255)
            tAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTg                                                                                   >  2:163780/1‑100 (MQ=255)
             aaCAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTgg                                                                                  >  1:4032759/1‑100 (MQ=255)
               cAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCg                                                                                >  1:3841165/1‑100 (MQ=255)
               cAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCg                                                                                <  1:2311355/100‑1 (MQ=255)
               cAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGGTCGGGAACAACAGCCCCCCACAACTGGCg                                                                                >  1:4145225/1‑100 (MQ=255)
               cAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAAAGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGCCg                                                                                >  1:397083/1‑100 (MQ=255)
                   gcCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGc                                                                            <  1:925752/100‑1 (MQ=255)
                    ccGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCa                                                                           >  2:3926264/1‑100 (MQ=255)
                     cGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCaa                                                                          >  1:2127065/1‑100 (MQ=255)
                     cGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCaa                                                                          >  1:3785204/1‑100 (MQ=255)
                     cGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCaa                                                                          <  1:49829/100‑1 (MQ=255)
                     cGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCaa                                                                          >  2:2399825/1‑100 (MQ=255)
                      ngAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCaaa                                                                         >  1:2489058/2‑100 (MQ=255)
                      ggAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCaaa                                                                         >  1:3242907/1‑100 (MQ=255)
                       gAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAg                                                                        <  2:3841122/100‑1 (MQ=255)
                       gAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAg                                                                        <  2:1042472/100‑1 (MQ=255)
                        aaCAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAgg                                                                       <  1:2146473/100‑1 (MQ=255)
                        aaCAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAgg                                                                       <  1:127178/100‑1 (MQ=255)
                         aCAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGt                                                                      >  1:1539533/1‑100 (MQ=255)
                         aCAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGt                                                                      <  1:1378450/100‑1 (MQ=255)
                          cAATTGCCGCCCAGATGGTAGCCGCTAACCCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAGCAGCCCCCCACAACTGGCGGGGCAAAGGTc                                                                     <  2:2620673/100‑1 (MQ=255)
                          cAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTc                                                                     >  1:2678496/1‑100 (MQ=255)
                          cAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTc                                                                     >  1:1794172/1‑100 (MQ=255)
                           aaTTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCa                                                                    <  2:2845251/100‑1 (MQ=255)
                           aaTTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCa                                                                    <  1:1426213/100‑1 (MQ=255)
                             ttGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGc                                                                  <  1:850970/100‑1 (MQ=255)
                             ttGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGc                                                                  <  2:1780604/100‑1 (MQ=255)
                             ttGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCACCACAACTGGCGGGGCAAAGGTCAGc                                                                  <  2:1236144/100‑1 (MQ=255)
                              tGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCa                                                                 <  1:2008009/100‑1 (MQ=255)
                                ccgccCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACATCAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAAt                                                               <  1:2952875/100‑1 (MQ=255)
                                 cgccCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATg                                                              <  2:2727160/100‑1 (MQ=255)
                                  gccCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGc                                                             >  2:277679/1‑100 (MQ=255)
                                    ccAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCg                                                           >  1:3904074/1‑100 (MQ=255)
                                     cAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGt                                                          >  2:1401621/1‑100 (MQ=255)
                                       gATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGttt                                                        <  1:2536353/100‑1 (MQ=255)
                                         tggtggCCGCTAAACCAGCATCACCAATGGCGTACAGGACTGCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTc                                                      <  2:2493998/100‑1 (MQ=255)
                                         tGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTc                                                      <  1:1707524/100‑1 (MQ=255)
                                            tAGCCGCTAAACCAGCATAACCATTGGTGTACAGTAATCCGTTCGGGAATAACAGCCCCCCACAACTGGCGGGGCAAAGTTCAGTAATGCCGTTTTCAAg                                                   <  2:2486083/100‑1 (MQ=255)
                                            tAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAg                                                   <  1:791806/100‑1 (MQ=255)
                                             aGCCGCCAAACCAGCATAACCAATCGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAg                                                   <  2:2042810/99‑1 (MQ=255)
                                               ccGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCgg                                                >  2:1979126/1‑100 (MQ=255)
                                                cGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGc                                               <  2:2974177/100‑1 (MQ=255)
                                                      aCCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAg                                         >  1:127687/1‑100 (MQ=255)
                                                      aCCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAg                                         >  2:2037752/1‑100 (MQ=255)
                                                       ccAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGc                                        <  2:181323/100‑1 (MQ=255)
                                                       ccAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGc                                        <  1:3518657/100‑1 (MQ=255)
                                                        cAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGcc                                       >  1:3141061/1‑100 (MQ=255)
                                                         aGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCg                                      <  2:3134642/100‑1 (MQ=255)
                                                          gCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCg                                      <  1:3770793/99‑1 (MQ=255)
                                                          gCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGa                                     >  2:1007794/1‑100 (MQ=255)
                                                               aCCCATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAgtcn                                 <  2:2489033/99‑2 (MQ=255)
                                                                ccAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGGTTTCAAGCGGCCCACAGCCGAgtcgtc                               >  1:1776577/1‑100 (MQ=255)
                                                                 cAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGtcgtcg                              <  2:4161258/100‑1 (MQ=255)
                                                                 cAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGtcgtcg                              >  1:3572105/1‑100 (MQ=255)
                                                                 cAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGtcgtcg                              <  1:458675/100‑1 (MQ=255)
                                                                     ggCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCATAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAAc                          >  1:4162954/1‑100 (MQ=255)
                                                                      gCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAAcc                         <  2:296124/100‑1 (MQ=255)
                                                                          aCAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAAc                     <  2:321959/100‑1 (MQ=255)
                                                                           cAGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACa                    >  1:1418747/1‑100 (MQ=255)
                                                                            aGGAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAg                   <  1:115874/100‑1 (MQ=255)
                                                                             ggAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACCGCCGAGTCGTCGCAACCAAACCGa                  >  1:890747/1‑100 (MQ=255)
                                                                             ggAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGa                  >  1:2360970/1‑100 (MQ=255)
                                                                             ggAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGa                  >  1:3151011/1‑100 (MQ=255)
                                                                              gAATCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGAt                 <  2:4032716/100‑1 (MQ=255)
                                                                                 tCCGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTg              <  1:338801/100‑1 (MQ=255)
                                                                                   cGTTCGGGAACAACAGCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGc             >  1:2367099/1‑100 (MQ=255)
                                                                                   cGTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGcc            <  1:2716337/100‑1 (MQ=255)
                                                                                    gTTCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCa           >  1:1959120/1‑100 (MQ=255)
                                                                                     ttCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAg          >  1:1976170/1‑100 (MQ=255)
                                                                                     ttCGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAg          >  1:2907884/1‑100 (MQ=255)
                                                                                       cGGGAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGAt        >  1:3429299/1‑100 (MQ=255)
                                                                                        gggAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATa       >  2:227620/1‑100 (MQ=255)
                                                                                        gggAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATa       >  1:621079/1‑100 (MQ=255)
                                                                                         ggAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAg      <  1:1672238/100‑1 (MQ=255)
                                                                                          gAACAACAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGt     >  1:2559993/1‑100 (MQ=255)
                                                                                           aacaacAGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTc    <  2:1436729/100‑1 (MQ=255)
                                                                                            acaacaGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTca   <  2:3133108/100‑1 (MQ=255)
                                                                                            acaacaGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTca   >  1:560958/1‑100 (MQ=255)
                                                                                            acaacaGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTca   <  1:1664076/100‑1 (MQ=255)
                                                                                            acaacaGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACACCCGAGTCGTCGAAACCAAACAGATTTGCCAGATAGTca   <  2:2583562/100‑1 (MQ=255)
                                                                                             caacaGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTcaa  <  1:355158/100‑1 (MQ=255)
                                                                                             caacaGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTcaa  >  2:2333583/1‑100 (MQ=255)
                                                                                             caacaGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTcaa  >  2:3380558/1‑100 (MQ=255)
                                                                                             caacaGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTcaa  >  2:11313/1‑100 (MQ=255)
                                                                                             caacaGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAAACAGTca   >  2:3499242/1‑99 (MQ=255)
                                                                                             caacaGCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTCTTCAAGCGGCCCACAGCCGAGTCGTCGCAACCAAACAGATCTGCCAGACACTcaa  >  2:1778430/1‑100 (MQ=255)
                                                                                                   |                                                                                              
CGATGCACGGGCTAACAGCGCCGGAACAATTGCCGCCCAGATGGTAGCCGCTAAACCAGCATAACCAATGGCGTACAGGAATCCGTTCGGGAACAACAGCCCCCCCACAACTGGCGGGGCAAAGGTCAGCAATGCCGTTTTCAAGCGGCCCACAGCCGAGTCGTCGAAACCAAACAGATCTGCCAGATAGTCAA  >  NC_000913/3304708‑3304901

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: