| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,765,794 | (C)7→8 | intergenic (‑18/‑124) | yfjM ← / → rnlA | CP4‑57 prophage; uncharacterized protein/CP4‑57 prophage; RNase LS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,765,787 | 1 | . | C | 93.5% | 466.2 / 24.9 | 140 | intergenic (‑11/‑131) | yfjM/rnlA | CP4‑57 prophage; uncharacterized protein/CP4‑57 prophage; RNase LS |
| Reads supporting (aligned to +/- strand): ref base . (6/3); new base C (61/69); total (68/72) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.13e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 170 total aligned reads displayed.
TGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTG > NC_000913/2765689‑2765881 | tGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑c < 1:914122/100‑1 (MQ=255)tGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑c < 1:2165529/100‑1 (MQ=255) gTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑cc < 1:881429/100‑1 (MQ=255) tCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑ccc < 1:62530/100‑1 (MQ=255) tCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑ccc < 2:310764/100‑1 (MQ=255) ctgctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑cccc > 2:372055/1‑100 (MQ=255) ctgctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑cccc > 2:3986529/1‑100 (MQ=255) ctgctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑cccc < 1:2411191/100‑1 (MQ=255) ctgctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCACCCATTTTGTGGACT‑gac > 2:502001/1‑96 (MQ=255) tgctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCTCCCATTTTGTGGACT‑G‑‑ccccc > 2:1664271/1‑100 (MQ=255) tgctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑ccccc < 2:3298634/100‑1 (MQ=255) tgctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑ccccc > 1:1982807/1‑100 (MQ=255) gctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGCCT‑G‑‑caccc > 2:1792510/1‑99 (MQ=255) gctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑ccccc > 2:1943329/1‑99 (MQ=255) gctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑ccccac > 2:2862910/1‑98 (MQ=255) ctgGCGCATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAGCGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑cccccc‑c > 2:206706/1‑100 (MQ=255) ctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑cccccc‑c < 2:3430013/100‑1 (MQ=255) ggCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑cccccc‑ccg > 2:3160535/1‑98 (MQ=255) ggCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCAGTTTGTGGACT‑G‑‑cccacc > 2:937887/1‑97 (MQ=255) gCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑cccccc‑ccgg < 1:694583/100‑4 (MQ=255) gCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑cccccc‑ccgg > 1:180167/1‑97 (MQ=255) cGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAAGGAAGGACATCATACCCCATTTTGTGGACT‑G‑‑cccccc‑cagg > 1:3661215/1‑96 (MQ=255) gAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑cccccc‑ccggta > 1:1629714/1‑95 (MQ=255) gAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑cccccc‑ccggta < 2:3807833/100‑6 (MQ=255) taatTACTAAGTATCGAGTTGCTGCTTTGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑CCCCCC‑CGGTAGACg < 2:1490778/100‑1 (MQ=255) aatTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCAATTTGTGGACT‑GC‑CCCCCC‑CGGTAGAc > 1:1776836/1‑99 (MQ=255) atTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGa > 1:128314/1‑100 (MQ=255) atTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGa < 1:1386109/100‑1 (MQ=255) tACTAAGTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATc < 1:3420612/100‑1 (MQ=255) tACTAAGTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑CCCCCC‑CGGTAGACGATcc < 1:4045752/100‑1 (MQ=255) aCTAAGTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATcc < 1:4104877/100‑1 (MQ=255) atctgTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCt < 2:2176913/96‑1 (MQ=255) aaGTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGCCGATCCTGc > 2:3869606/1‑100 (MQ=255) aaGTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGc < 1:3487830/100‑1 (MQ=255) aaGTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGc < 1:1056070/100‑1 (MQ=255) gTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCtagat > 1:2176933/1‑96 (MQ=255) gTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGccc < 1:3694228/100‑1 (MQ=255) gTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGccc < 1:3925664/100‑1 (MQ=255) aTCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGCCT‑GA‑CCCCCC‑CGGCAGACGCTCCCGCCCt > 1:792071/1‑99 (MQ=255) cGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCtata < 2:1499349/100‑1 (MQ=255) gAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGt > 2:3852179/1‑100 (MQ=255) gTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGtt < 2:2365721/100‑1 (MQ=255) gTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCAAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑CCCCCCACGGTAGACGATACTGCCCTATAGt > 2:2752824/1‑99 (MQ=255) ttGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTg < 2:4083745/100‑1 (MQ=255) tgctgcTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTgg < 1:1183322/100‑1 (MQ=255) tgctgcTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTACAGTTgg > 1:1249040/1‑100 (MQ=255) tgctTGGTGGGATCAGCGAAG‑GGTTTCCGAAACGATGAACATAACCCCCATTTTTGGGGCCG‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGa < 1:3817497/98‑1 (MQ=255) gctTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTg < 2:635061/100‑1 (MQ=255) tGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGGCCATCCTGCCCTATAGTTGGAGTgac > 2:3774105/1‑97 (MQ=255) tGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGccc > 2:718444/1‑100 (MQ=255) tGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGcc > 1:1227563/1‑99 (MQ=255) tGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTGTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGccc > 2:4106106/1‑100 (MQ=255) gTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGccccc < 2:2030097/100‑1 (MQ=255) gTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGCGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGccccc < 2:2909544/100‑1 (MQ=255) tGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCCCCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGccccc < 2:2135387/100‑1 (MQ=255) tGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCt < 1:2226352/100‑1 (MQ=255) gaTCAG‑GAAGAGGTTACCGAAACGATGGACCTCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGACCCTGCCCTATAGTTGGAGTCCCCCCTa > 2:991397/1‑98 (MQ=255) gaTCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGAGCCTGCCCTATAGTTGGCGTGCCCCCTAt > 2:3513076/1‑99 (MQ=255) aTCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTc > 2:300292/1‑100 (MQ=255) aTCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTc > 2:2999110/1‑99 (MQ=255) tCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCa < 1:3774147/100‑1 (MQ=255) cAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCa < 1:502005/99‑1 (MQ=255) aG‑GAAGGGGTTACCGAAACGATGGACATCATCCCCCATTTTTTGGACT‑GCCCCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCa < 2:1799283/99‑1 (MQ=255) g‑gAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGt < 1:3522948/100‑1 (MQ=255) g‑gAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGt < 1:3869649/100‑1 (MQ=255) g‑gAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAAGt > 2:1140297/1‑100 (MQ=255) g‑gAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGGGGACTGG‑‑CCCCCC‑CTGTGGAGGAGCCTTCCCGATTGTTGTGGTGGCCCCTAGTGAgg > 1:190566/1‑99 (MQ=255) gAAGAGGTTACCGAAACGATGGACATTATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGt > 2:111966/1‑99 (MQ=255) gAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTg < 1:3296222/100‑1 (MQ=255) gAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTg < 2:3149836/100‑1 (MQ=255) aaGAGGTTACCTAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTgg < 1:3454916/100‑1 (MQ=255) aaGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTgg < 1:1505021/100‑1 (MQ=255) agagGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGc < 1:286301/100‑1 (MQ=255) ggTTACCGAAACGATGGACATCATCCCCCATTTTGTGGTCT‑GC‑CCCCCC‑CGGTAGACGCTCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTaa > 2:2569281/1‑100 (MQ=255) aCCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTAAGGTGGCTAAAttt > 2:2848445/1‑100 (MQ=255) ccGAAACGATGGACATCATCCCCCATTTTGTGGACTAC‑‑CCCCCC‑CGGCAGACGATCCTGCCCCATAGACGGTGTGCCCCCTCTTCAGGTGGCTAAATTTa > 1:1263736/1‑100 (MQ=255) ccGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCGATTCAGGTGGCTAAATTTa > 1:4058476/1‑100 (MQ=255) cGAAACGATGGACATCATCCACCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACTATCCTGCCCTATATTTGGAGAGCACCCTATTCAGGTGGCTAAATTTa > 2:1421266/1‑99 (MQ=255) gAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAg < 2:3246680/99‑1 (MQ=255) gAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGc > 2:809897/1‑100 (MQ=255) gAAACGATGGACATCATCCCCCATCTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTAGAGTGCCCCCTATTCAGGTGCCTAAATTTAGc > 1:3144504/1‑100 (MQ=255) aaaCGATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCa < 2:493155/100‑1 (MQ=255) gATGGACATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATc < 1:2140621/100‑1 (MQ=255) aCATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATac < 2:490957/100‑1 (MQ=255) aCATCATCCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATac > 1:2516693/1‑100 (MQ=255) tcatcCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACt > 1:101529/1‑100 (MQ=255) tcatcCCCCATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACt > 2:2516939/1‑100 (MQ=255) cccccATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAg > 1:3215141/1‑100 (MQ=255) cccccATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAg > 2:1769568/1‑100 (MQ=255) ccccATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgg > 2:3934313/1‑100 (MQ=255) ccATTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggg > 1:469344/1‑100 (MQ=255) aTTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggggg > 1:2609624/1‑100 (MQ=255) aTTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggggg > 1:1654892/1‑100 (MQ=255) aTTTTGTGGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggggg < 2:2258368/100‑1 (MQ=255) tgtgGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGtatt < 1:2897227/100‑1 (MQ=255) tgGACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGtattat < 1:3986572/100‑1 (MQ=255) ggACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTattatt > 2:279347/1‑100 (MQ=255) gACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTCTTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTg > 2:3337658/1‑100 (MQ=255) gACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTg < 1:3191907/100‑1 (MQ=255) gACT‑GC‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTg < 1:111966/100‑1 (MQ=255) | TGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAG‑GAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑CCCCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTG > NC_000913/2765689‑2765881 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |