| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,866,592 | +C | coding (960/993 nt) | rpoS ← | RNA polymerase, sigma S (sigma 38) factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,866,588 | 1 | . | C | 97.9% | 520.1 / 3.0 | 143 | coding (964/993 nt) | rpoS | RNA polymerase, sigma S (sigma 38) factor |
| Reads supporting (aligned to +/- strand): ref base . (0/3); new base C (61/79); total (61/82) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.61e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 164 total aligned reads displayed.
CATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑CCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACA > NC_000913/2866489‑2866682 | cATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAg > 1:3107135/1‑100 (MQ=255) aTCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑c < 1:2526017/100‑1 (MQ=255) tCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑cc < 1:486501/100‑1 (MQ=255) tCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑cc > 1:1486554/1‑100 (MQ=255) ggACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑ccc‑c > 1:699281/1‑100 (MQ=255) ggACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑ccc‑c < 2:124460/100‑1 (MQ=255) cTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑ccc‑cctgc > 1:1059682/1‑96 (MQ=255) cTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑ccc‑cctgc > 2:727477/1‑96 (MQ=255) ttttATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGTCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑ccctcttcg > 1:3754461/1‑94 (MQ=255) ttttATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑ccc‑cctgcg > 2:2386249/1‑95 (MQ=255) ttttATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑ccc‑cctgcg > 2:265277/1‑95 (MQ=255) tttATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGt < 2:1314033/100‑1 (MQ=255) aTTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTg > 1:858250/1‑100 (MQ=255) aTTGTGCACACAAAAGGCCAGCCTCGCTTGAGACTTGCCTTTCTTACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTg < 2:3431557/100‑1 (MQ=255) ttGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGc < 1:1876025/100‑1 (MQ=255) tgtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCa < 2:1891044/100‑1 (MQ=255) tgtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCa < 2:3438423/100‑1 (MQ=255) tgtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCa < 1:492232/100‑1 (MQ=255) gtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAg < 1:3214855/100‑1 (MQ=255) gtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAg < 1:3622516/100‑1 (MQ=255) tgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAgg > 2:3257158/1‑100 (MQ=255) cacaGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGAt < 1:265282/100‑1 (MQ=255) cacaGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGAt > 1:976834/1‑100 (MQ=255) caGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGAttt > 1:142173/1‑100 (MQ=255) caGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGAttt > 1:3640755/1‑100 (MQ=255) gAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCCCACTTACGCGCGGAACAGCGCTTCGGGATTCAGCCCC‑C‑TGCGTTTGCAGGTTTTc > 2:4013670/1‑99 (MQ=255) aaaaGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCTCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTcgc < 2:2231309/100‑1 (MQ=255) aaaGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGGTTGCAGGATTTcgcg > 1:4114886/1‑100 (MQ=255) ccAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAAc < 1:2571354/100‑1 (MQ=255) cAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACg > 2:3645732/1‑100 (MQ=255) gCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGgc > 1:2288007/1‑100 (MQ=255) gCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGgc > 1:522622/1‑100 (MQ=255) cGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAg < 1:2206109/100‑1 (MQ=255) gCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAgg < 1:135930/100‑1 (MQ=255) ttGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGcc < 2:3318668/100‑1 (MQ=255) gagaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCtt < 2:583780/100‑1 (MQ=255) gagaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCtt < 1:1645795/100‑1 (MQ=255) agaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTc > 2:689445/1‑100 (MQ=255) gaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCa > 2:2271295/1‑100 (MQ=255) gaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCa < 2:4100423/100‑1 (MQ=255) cTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAAc < 1:2129438/100‑1 (MQ=255) tGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAAcc < 2:968459/100‑1 (MQ=255) gCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTg < 1:3452810/100‑1 (MQ=255) gCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTg < 1:3412148/100‑1 (MQ=255) ccTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGa > 2:1035783/1‑100 (MQ=255) cTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGaa < 1:3988095/100‑1 (MQ=255) cTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGaa < 2:3640715/100‑1 (MQ=255) tttCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAAt > 2:2124966/1‑100 (MQ=255) ttCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATc > 1:714758/1‑100 (MQ=255) cTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTg < 1:2000366/100‑1 (MQ=255) cTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTg < 2:1756779/100‑1 (MQ=255) tGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTgg > 1:2737380/1‑100 (MQ=255) tGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTgg > 1:731676/1‑100 (MQ=255) gACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGTGCAGGCCTTCAACCTGAATCTGGc < 2:2491845/100‑1 (MQ=255) gACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGc < 2:2090629/100‑1 (MQ=255) aCAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCg < 1:2423368/100‑1 (MQ=255) cAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGa < 2:2737348/100‑1 (MQ=255) gATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAac > 2:621969/1‑100 (MQ=255) gATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAac < 2:2163436/100‑1 (MQ=255) cttacttaCTCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGt > 2:1898775/1‑100 (MQ=255) tacttactCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTc < 1:966168/100‑1 (MQ=255) tacttactCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTc < 2:1930965/100‑1 (MQ=255) cttactCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCAc > 1:1887810/1‑100 (MQ=255) cttactCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCAc < 1:3709181/100‑1 (MQ=255) tactCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACgg > 2:3148383/1‑100 (MQ=255) ctCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACggg < 2:3119956/99‑1 (MQ=255) ctCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGt > 2:3166500/1‑100 (MQ=255) ctCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGt > 2:1169945/1‑100 (MQ=255) tCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTg < 1:3269783/100‑1 (MQ=255) tCGCGGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTCGCGAACACGTTCACGGGTg < 2:3254657/100‑1 (MQ=255) cgcgGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATTTGGCGAACACGTTCACGGGTGa > 2:1594450/1‑100 (MQ=255) cgcgGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGa > 1:2910271/1‑100 (MQ=255) cgcgGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGa > 1:2966694/1‑100 (MQ=255) cgGAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAgg > 1:3822517/1‑100 (MQ=255) ggAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGc < 1:3936647/100‑1 (MQ=255) ggAACAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGc > 2:2158145/1‑100 (MQ=255) aaCAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCa < 1:2220836/100‑1 (MQ=255) aCAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCaa < 1:841549/100‑1 (MQ=255) cAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAt > 2:30328/1‑100 (MQ=255) cAGCGCTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAt > 1:2091865/1‑100 (MQ=255) gcgcTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAttt > 1:3868606/1‑100 (MQ=255) gcTTCGATATTCAGCCCC‑C‑TGCATTTGCAGGTTTTCGTGCAAACGGCGCAGGCCGTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCa < 2:2810985/100‑1 (MQ=255) cTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc > 1:3570928/1‑100 (MQ=255) cTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc > 1:329064/1‑100 (MQ=255) cTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc > 2:2053873/1‑100 (MQ=255) cTTCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc < 1:936677/100‑1 (MQ=255) ttCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACg < 2:1610071/100‑1 (MQ=255) tCGATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGa > 2:1990904/1‑100 (MQ=255) gATATTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAcc < 2:699277/100‑1 (MQ=255) gATATTCAG‑CCC‑CTTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAcc < 1:2431312/100‑1 (MQ=255) ttttCAGCCCC‑C‑TACGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTa > 1:2812552/3‑100 (MQ=255) tatTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTa > 2:1081454/1‑100 (MQ=255) tatTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTa < 2:3910090/100‑1 (MQ=255) tatTCAG‑CCCGC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTa < 2:2735148/100‑1 (MQ=255) atTCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTAc > 1:3501053/1‑100 (MQ=255) ttCAGCCCC‑C‑TGCGTTTGCAGGATTTCTCGCAAACGCCGAAGGCCTTCAACCTGAATCTGGCAAACACGTTCACCGGTGAGGACAATTCCACGACCTACa < 2:777019/100‑1 (MQ=255) ttCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCATGGGAGAGGCCAATTTCACGACCTACa > 2:2815120/1‑100 (MQ=255) ttCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACa < 2:1613091/100‑1 (MQ=255) ttCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACa < 1:305891/100‑1 (MQ=255) ttCAGCCCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTAACGGGTGAGGCCAATTTCACGACCTACa < 1:3557940/100‑1 (MQ=255) | CATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑CCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACA > NC_000913/2866489‑2866682 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |