| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,900,306 | (A)9→10 | intergenic (‑33/‑286) | ygcW ← / → yqcE | putative SDR family oxidoreductase/putative MFS transporter, inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,900,297 | 1 | . | A | 85.4% | 442.9 / 67.3 | 144 | intergenic (‑24/‑295) | ygcW/yqcE | putative SDR family oxidoreductase/putative MFS transporter, inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base . (14/7); new base A (62/61); total (76/68) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.37e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 162 total aligned reads displayed.
CCGGTAACAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGC‑‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCT > NC_000913/2900200‑2900395 | ccGGTAACAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGC‑‑‑a‑a > 2:159023/1‑100 (MQ=255) cGGTAACAATTGCGGTTTTACCTTTCTGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGC‑‑‑a‑a‑a > 1:2542368/1‑100 (MQ=255) ggTAACAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGC‑‑‑a‑a‑a‑a < 1:2598439/100‑1 (MQ=255) cAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGC‑‑‑a‑a‑a‑aaaaaa > 2:2626339/1‑100 (MQ=255) cAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGC‑‑‑a‑a‑a‑aaaaaa > 1:3680913/1‑100 (MQ=255) cAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGC‑‑‑a‑a‑a‑aaaaaa > 1:3993467/1‑100 (MQ=255) cAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGC‑‑‑a‑a‑a‑aaaaaa > 1:3048795/1‑100 (MQ=255) cAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGC‑‑‑a‑a‑a‑aaaaaa > 1:227198/1‑100 (MQ=255) cAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGC‑‑‑a‑a‑a‑aaaaaa > 2:3000995/1‑100 (MQ=255) aTTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGC‑‑‑a‑a‑a‑aaaaaaag > 1:680851/1‑98 (MQ=255) ttGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGC‑‑‑a‑a‑a‑aaaaaaaga > 1:703794/1‑97 (MQ=255) gCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGC‑‑‑a‑a‑a‑aaaaaaagaaa > 1:2993587/1‑95 (MQ=255) gCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGC‑‑‑a‑a‑a‑aaaaaaaga > 1:1137228/1‑95 (MQ=255) ggTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAgg < 1:1883511/100‑1 (MQ=255) gTTTTACCTTTGAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGC‑‑‑A‑A‑A‑AAAAAAGAAAGGTa < 2:2086746/100‑1 (MQ=255) ttttACCTGTCAGGGAGAAAAAATCCCTTGAGACCGAATTGACAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTa < 1:2576800/100‑1 (MQ=255) tACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTAAAAAAAAAA‑‑A‑A‑A‑AAAAAAGAAAGGTAACt < 2:2609178/100‑1 (MQ=255) aCCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGAAA‑‑A‑A‑A‑AAAAAAGAAAGGTAACtt < 2:227193/100‑1 (MQ=255) ccTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTc > 1:2753891/1‑100 (MQ=255) ccTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTc > 2:436904/1‑100 (MQ=255) tttCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGC‑‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTcccc > 1:3316540/1‑100 (MQ=255) cAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAA‑A‑A‑A‑AAAAAAGAAAGGCAACTTccccc > 2:631840/1‑100 (MQ=255) cAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCcg > 1:2928412/1‑100 (MQ=255) aGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCAA‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCcg > 1:3951737/1‑100 (MQ=255) aGGGAAAAAAAATACATTGAGAACGGATGGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCcg < 2:3654195/99‑1 (MQ=255) gggAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTCACTTCCCCcgcg < 1:2738887/100‑1 (MQ=255) ggAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCga > 1:1292948/1‑100 (MQ=255) agaAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCgaga > 1:2697072/1‑100 (MQ=255) agaAAAAAACCATTGAAAACGCATTGAGAGATACGATGGAAATAGTTAGTTCCAATTTCCGTAAAAAA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTcccc < 2:2633611/93‑1 (MQ=255) gaAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGagag > 2:3389369/1‑100 (MQ=255) gaAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGagag > 2:808438/1‑100 (MQ=255) gaAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGC‑‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGagag > 2:2322795/1‑99 (MQ=255) gaAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCAGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCgag > 2:1219606/1‑98 (MQ=255) aaaaaTCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAgggg > 1:129454/1‑99 (MQ=255) aaaaaTCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAggg > 1:3626468/1‑100 (MQ=255) aaaaTCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGa < 2:3059283/100‑1 (MQ=255) aaTCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAg > 1:1115658/1‑100 (MQ=255) ccATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCACCAATTTCCGTAAGGC‑‑‑A‑A‑AGAAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGt > 2:2278668/1‑98 (MQ=255) cATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCTCTCGCGGGGGAAGTTAc < 1:3706131/100‑1 (MQ=25) cATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTAc < 1:1181558/100‑1 (MQ=255) cATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTAc > 2:224428/1‑100 (MQ=255) aTTGAAAACGCATTGAGAGATTCGATTGACATAGTTAGCTCAAAAATAAAAAAAAAA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCTCTCGCGGGGGAAGTTAcc < 2:3806079/100‑1 (MQ=9) ttGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTAcc < 1:340041/99‑1 (MQ=255) tGAGTACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAAATTCCCCCGCGAGAGGGAAGTTACCtt > 2:1430220/1‑100 (MQ=255) tGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGC‑‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCtt < 1:1045656/99‑1 (MQ=255) gagaACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCttt > 2:2368861/1‑100 (MQ=255) aaCGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTtctc < 1:2813193/100‑1 (MQ=255) aaCGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCCCGAGAGGGGAGTTACCTTtc > 1:1097068/1‑98 (MQ=255) cGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCAt > 2:1678066/1‑100 (MQ=255) cGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCAt > 2:1787099/1‑100 (MQ=255) cATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTa > 2:2392323/1‑100 (MQ=255) cATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTa > 2:4042815/1‑100 (MQ=255) cATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTa < 2:314959/100‑1 (MQ=255) ttGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGC‑‑‑A‑AGA‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTAtc > 2:706296/1‑100 (MQ=255) gagagaTTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTAtctc > 1:1214352/1‑100 (MQ=255) agagaTTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGC‑‑‑‑‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTgg < 1:3184840/100‑1 (MQ=255) gaTTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTg < 2:2542341/98‑1 (MQ=255) gaTTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTACCCCGCGAGAGGGAAGTAACCTTTCTCATTAtctccg > 2:1301369/1‑96 (MQ=255) aTTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTa > 1:2384164/1‑100 (MQ=255) aTTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTa < 1:2134782/100‑1 (MQ=255) tCGATTGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAAc < 1:3404725/100‑1 (MQ=255) cGATTGAAATAGTTAGCTCCAATTTCCGTAAGGAA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACt < 2:3048762/100‑1 (MQ=255) gATTGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTg > 2:3509577/1‑100 (MQ=255) gATTGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTg < 1:945225/100‑1 (MQ=255) gATTGACATAGTTAGCTCCAATTTCCGTAAGGAA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACt < 2:3993424/99‑1 (MQ=255) gATTGACATAGTTAGCTCAAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTg < 2:3280713/100‑1 (MQ=255) ttGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTgg > 1:200009/1‑99 (MQ=255) ttGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGga < 1:170015/100‑1 (MQ=255) ttGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGga > 1:25001/1‑100 (MQ=255) tGACCTAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGgag < 1:2493082/100‑1 (MQ=255) tGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGgag < 2:3227322/100‑1 (MQ=255) tGACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGga > 1:3290433/1‑99 (MQ=255) tGACATAGTTAGCTCCAATTTCCGTAAAGAA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGgag < 2:560004/100‑1 (MQ=255) gACATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGgaga > 1:2065096/1‑100 (MQ=255) gACATAGTTAGCTCCAATTTCCGTAAGGC‑‑‑AGA‑A‑GAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGATAACTGgaga > 2:2750470/1‑100 (MQ=255) aCATAGTTAGCTCCAATTTCCGTAAGGCAAAA‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGgag < 1:55005/100‑1 (MQ=255) cATAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATa > 1:3106861/1‑100 (MQ=255) tAGTTAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAAt > 1:4652/1‑100 (MQ=255) tAGTTAGCTCCAATTTCCGTAAGGC‑‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAAtt > 1:2820273/1‑100 (MQ=255) tAGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAAttttt < 1:4120215/100‑1 (MQ=255) aGCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTa < 1:2641147/100‑1 (MQ=255) gCTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACATTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAg > 2:1722641/1‑100 (MQ=255) acTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAg > 2:1077664/2‑100 (MQ=255) cTCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGc > 1:96122/1‑100 (MQ=255) cTCCAATTTCCAAAAAGAA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGc < 2:3851415/100‑1 (MQ=255) tCCAATTTCCGTAAGGCAA‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGc < 2:936681/100‑1 (MQ=255) tCCAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCa > 2:120143/1‑100 (MQ=255) ccAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCAt < 1:430739/100‑1 (MQ=255) cAATTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCAt > 1:1965892/1‑99 (MQ=255) aaTTTCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATaa > 1:3225508/1‑100 (MQ=255) ttCCGTAAAGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAggg < 2:386455/100‑1 (MQ=255) tCCGTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGc > 1:2170225/1‑100 (MQ=255) cGTAAGGCAA‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCa < 1:324606/100‑1 (MQ=255) gTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATa < 1:224433/100‑1 (MQ=255) gTAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATa > 1:1045224/1‑100 (MQ=255) tAAGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATaa > 1:2270799/1‑100 (MQ=255) aaGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAAc < 1:4054539/100‑1 (MQ=255) aaGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAAc < 1:3543228/100‑1 (MQ=255) aaGGCA‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAAc < 1:1430231/100‑1 (MQ=255) gC‑‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCt > 1:351360/1‑100 (MQ=255) | CCGGTAACAATTGCGGTTTTACCTTTCAGGGAGAAAAAATCCATTGAGAACGCATTGAGAGATTCGATTGACATAGTTAGCTCCAATTTCCGTAAGGC‑‑‑A‑A‑A‑AAAAAAGAAAGGTAACTTCCCCCGCGAGAGGGAAGTTACCTTTCTCATTATCTCTGGTAACTGGAGATAATTTTTAGCATAAGGGCATAACTGCT > NC_000913/2900200‑2900395 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |