| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,459,293 | (G)5→6 | coding (955/1482 nt) | gspE → | general secretory pathway component, cryptic |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,459,288 | 1 | . | G | 96.5% | 510.3 / 10.5 | 144 | coding (950/1482 nt) | gspE | general secretory pathway component, cryptic |
| Reads supporting (aligned to +/- strand): ref base . (2/3); new base G (65/74); total (67/77) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 | |||||||||||
Only 100 of 155 total aligned reads displayed.
TGGAAGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGT‑GGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTGCAT > NC_000913/3459189‑3459383 | tGGAAGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAt‑ggt < 1:224902/100‑1 (MQ=255) ggCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGT‑ggggg > 2:4048256/1‑100 (MQ=255) gCATTGGGCATACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCTCCAGGACCCGGATGTCGTCAT‑GGT‑gggggg < 2:2750354/100‑2 (MQ=255) gCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGT‑gggggg < 2:2310099/100‑2 (MQ=255) aTTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGT‑ggggggaa > 1:1893719/1‑97 (MQ=255) tGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGT‑ggggggaaat > 2:698379/1‑95 (MQ=255) tGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGT‑ggggggaaat > 1:3038367/1‑95 (MQ=255) tGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGT‑GGGGG‑gaaat > 2:2278552/1‑98 (MQ=255) gggCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAAtt > 1:415751/1‑100 (MQ=255) gggCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGT‑ggggagaa > 1:1585423/1‑93 (MQ=255) ggCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTc > 1:3978611/1‑100 (MQ=255) cAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGt < 2:1231755/100‑1 (MQ=255) cAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGt > 2:163199/1‑100 (MQ=255) cAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGt < 1:1252012/100‑1 (MQ=255) aaaCGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTg < 1:2132548/100‑1 (MQ=255) aaaCGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTg < 1:2581995/100‑1 (MQ=255) aCGCAGGTGAATACCTGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGAt < 1:2429226/100‑1 (MQ=255) gCAGGAGAATACCCGTGTGGATATGTCATTCGCTCGAGGCATGCGCGGCATACATCGCCAGGACCCGGATGTCGACAT‑GGTGGGGGG‑CAATTCGTGATAc < 2:616623/100‑1 (MQ=255) cAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACa < 2:2990364/100‑1 (MQ=255) ggTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGa < 1:2034633/100‑1 (MQ=255) ggTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGa > 2:1031031/1‑100 (MQ=255) ggTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGa < 1:3268291/100‑1 (MQ=255) ggTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGa > 1:1376699/1‑100 (MQ=255) ggTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGa > 2:3629317/1‑100 (MQ=255) ggTGAATACCCGTGTGGATATGTCTTGCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGa < 2:3890386/100‑1 (MQ=255) gTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGaa > 1:2537749/1‑100 (MQ=255) gAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAAc > 2:3408875/1‑100 (MQ=255) gAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAAc < 1:3718444/100‑1 (MQ=255) aTACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACcg < 2:2535629/100‑1 (MQ=255) tACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACcgc > 1:2128770/1‑100 (MQ=255) tACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACcgc > 2:3174418/1‑100 (MQ=255) aCCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACcgcg < 2:605111/100‑1 (MQ=255) cccGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCgcgc < 2:1292362/100‑1 (MQ=255) cccGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCgcgc > 1:1213291/1‑100 (MQ=255) cccGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GCTGGGGGG‑AAATTCGTGATACAGAAACcgccc < 1:2815393/100‑3 (MQ=255) ccGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGGCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCa < 2:1958640/100‑1 (MQ=255) cGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAg < 1:3082783/100‑1 (MQ=255) tgGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTg < 2:3040584/100‑1 (MQ=255) gATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCg > 2:807618/1‑100 (MQ=255) atatGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCgg < 1:1440343/100‑1 (MQ=255) tatGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGt > 2:1717523/1‑100 (MQ=255) tGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTc > 1:3667585/1‑100 (MQ=255) gTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCa > 1:3373305/1‑100 (MQ=255) tCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAg < 2:1893705/100‑1 (MQ=255) tCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAg < 1:3651263/100‑1 (MQ=255) cTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAgg < 1:2957493/100‑1 (MQ=255) ttCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGcc > 2:1764604/1‑100 (MQ=255) ttCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGc > 2:4135351/1‑99 (MQ=255) tcgctcgcGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCt > 1:101213/1‑100 (MQ=255) tcgctcgcGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCt < 1:1415671/100‑1 (MQ=255) tcgctcgcGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCt > 2:2147695/1‑100 (MQ=255) gctcgcGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCg > 1:3480353/1‑100 (MQ=255) gctcgcGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCg > 1:1990337/1‑100 (MQ=255) ctcgcGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGc > 2:2588703/1‑100 (MQ=255) cgcgGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCt < 1:2848470/99‑1 (MQ=255) cgcgGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTc > 2:287276/1‑100 (MQ=255) cgcgGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTc > 2:3373518/1‑100 (MQ=255) gcgGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCa > 1:2319840/1‑100 (MQ=255) ccTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCgg > 1:320281/1‑100 (MQ=255) cTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGc < 1:2254387/100‑1 (MQ=255) tGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGCTTGCGGTTCAGGCCTCGCTCACCg > 2:1034626/1‑97 (MQ=255) tGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGcc < 1:3344464/100‑1 (MQ=255) gcgcgcCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCa > 1:967230/1‑100 (MQ=255) cgcgcCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCAt < 1:1031036/100‑1 (MQ=255) cgcCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCt > 1:1463874/1‑100 (MQ=255) gcCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAGCCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTg < 2:3581001/100‑1 (MQ=255) ccATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTgn < 2:1702266/100‑2 (MQ=255) cATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGt < 2:1826713/100‑1 (MQ=255) cATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGt < 1:3766092/100‑1 (MQ=255) cATACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGt < 1:476214/100‑1 (MQ=255) aTACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTa > 2:1850673/1‑100 (MQ=255) aTACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTa > 1:1576819/1‑100 (MQ=255) tACTTGGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑ACATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTAc < 2:970145/100‑1 (MQ=255) tACTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACAGGCCATCTGGTAc > 2:1965880/1‑100 (MQ=255) cTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTagat > 1:14891/1‑97 (MQ=255) cTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTActc > 1:1964481/1‑100 (MQ=255) cTTCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTActc > 1:2157647/1‑100 (MQ=255) ttCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTActct > 2:665485/1‑100 (MQ=255) ttCGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTActct < 1:1509222/100‑1 (MQ=255) tCGCCAGGACCCGGATGTCGTCATGGGG‑GGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGGGGGTCAGGCCTCGCTCACCGGCCATCTGGTACtctc > 2:2252605/1‑100 (MQ=255) cGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGt < 2:14891/93‑1 (MQ=255) cGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACtctc < 2:2211138/99‑1 (MQ=255) cGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCa > 2:1801685/1‑100 (MQ=255) cGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCa > 1:3597743/1‑100 (MQ=255) cGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCa < 1:1717535/100‑1 (MQ=255) cGCCAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCa < 1:2278572/100‑1 (MQ=255) ccAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCaa < 2:1363302/99‑1 (MQ=255) cAGGACCCGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAaca < 1:769834/100‑1 (MQ=255) gACACGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTc < 2:394247/100‑1 (MQ=255) cccGGATGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCca > 2:455368/1‑100 (MQ=255) tccgATCTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCcac < 1:757485/97‑1 (MQ=255) aTGTCGTCAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTa > 1:566420/1‑100 (MQ=255) gtcgtcAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAAc > 2:882748/1‑100 (MQ=255) tcgtcAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACa > 2:1091960/1‑100 (MQ=255) tcgtcAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACa > 2:146297/1‑100 (MQ=255) cgtcAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAg < 1:3416775/100‑1 (MQ=255) cgtcAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAg > 2:1819886/1‑100 (MQ=255) gtcAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGt > 2:3716158/1‑100 (MQ=255) cAT‑GGTGGGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTGc < 1:2373619/100‑1 (MQ=255) t‑ggt‑ggGGGCAAATTCGTGATACAGAAACCGATCAGATTGCGGTTCAGGCCTCGCTCACCGGCACTCTCGTACTCTCAACACTCCCCACTAACAGTGCAt > 2:3491954/1‑100 (MQ=255) | TGGAAGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GGT‑GGGGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTGCAT > NC_000913/3459189‑3459383 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |