| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,951,598 | +T | pseudogene (57/663 nt) | ilvG → | pseudogene, acetolactate synthase 2 large subunit, valine‑insensitive; acetolactate synthase II, large subunit, cryptic, interrupted |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,951,597 | 1 | . | T | 97.7% | 597.1 / 5.0 | 176 | pseudogene (56/663 nt) | ilvG | pseudogene, acetolactate synthase 2 large subunit, valine‑insensitive; acetolactate synthase II, large subunit, cryptic, interrupted |
| Reads supporting (aligned to +/- strand): ref base . (2/2); new base T (91/79); total (93/83) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 188 total aligned reads displayed.
TTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCA‑TCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCA > NC_000913/3951498‑3951690 | tttAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCa > 2:3288816/1‑100 (MQ=255) ttAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCA‑t < 1:2594954/100‑1 (MQ=255) tAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCA‑tt > 2:2469518/1‑99 (MQ=255) tAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCA‑tt > 1:456647/1‑99 (MQ=255) tAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCA‑tt > 2:3576632/1‑99 (MQ=255) aTGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCA‑ttccc > 2:1157979/1‑96 (MQ=255) tGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCA‑Ttcccg < 1:3387469/100‑3 (MQ=255) gCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCgg < 2:2396064/100‑1 (MQ=255) gCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCgg < 1:3711540/100‑1 (MQ=255) gCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCgg > 1:2351690/1‑100 (MQ=255) ctctGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCgg > 2:2976577/1‑99 (MQ=255) ctctGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCA‑ttccaggt < 2:2662770/100‑8 (MQ=255) tctGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTg < 1:2762564/100‑1 (MQ=255) ctGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGa > 1:1095438/1‑100 (MQ=255) ctGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGa > 2:852483/1‑100 (MQ=255) ctGTTACCAGCAGTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATGCCTGGCGTTACGACCATTCCCGGt < 2:52882/98‑1 (MQ=255) tGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGan < 1:2045133/100‑2 (MQ=255) tGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGAc < 2:1419103/100‑1 (MQ=255) tGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGAc > 1:2038539/1‑100 (MQ=255) tGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGAc < 1:3163466/100‑1 (MQ=255) tACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCt > 2:2496642/1‑100 (MQ=255) tACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCt > 1:2178261/1‑100 (MQ=255) aCCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTa > 1:3835107/1‑100 (MQ=255) cAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATc < 1:2305998/100‑1 (MQ=255) cAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATc > 1:930421/1‑100 (MQ=255) cAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATAAACATTGCTGGCGTTACGACCATTCCCGGTGACGCTATc > 2:2938643/1‑100 (MQ=255) aGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCt < 2:3752497/100‑1 (MQ=255) gCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTa > 1:1832512/1‑100 (MQ=255) gCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTa < 1:873396/100‑1 (MQ=255) cATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTAc > 2:3331341/1‑100 (MQ=255) tACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTAcgcg < 1:3027150/100‑1 (MQ=255) gcagcCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCgt > 1:2960063/1‑100 (MQ=255) cagcCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCgt < 2:33572/99‑1 (MQ=255) gcCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCgttgt < 1:196017/100‑1 (MQ=255) gcCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCgttgt > 1:1684044/1‑100 (MQ=255) gcCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCgttgt > 1:4153031/1‑100 (MQ=255) gcCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCA‑TCCCGGTGACGCTATCTACGCGCCgttgtt > 2:3997557/1‑100 (MQ=255) ccGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCgttgtt < 2:2591757/100‑1 (MQ=255) cGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCgttgttg > 2:3100675/1‑100 (MQ=255) cGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCgttgttg > 2:471981/1‑100 (MQ=255) gTTAAATCAATGACTGGCAGCAACACTGCGCGCCGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCgttgttg < 2:3906657/99‑1 (MQ=255) gTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCgttgttgt < 2:506773/100‑1 (MQ=255) ttAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCgttgttgtt < 2:227475/100‑1 (MQ=255) tAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTa > 2:2006268/1‑100 (MQ=255) tAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTa < 2:147196/100‑1 (MQ=255) aaaTCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTaa > 1:1144679/1‑100 (MQ=255) aaTCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTaa‑a > 1:1883955/1‑100 (MQ=255) aTCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTaa‑aa > 2:3746968/1‑100 (MQ=255) tCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑aac < 2:1213603/100‑1 (MQ=255) tCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑aac < 2:317664/100‑1 (MQ=255) tCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑aac < 2:436363/100‑1 (MQ=255) gACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTg > 2:1224901/1‑100 (MQ=255) gACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTg < 1:3288851/100‑1 (MQ=255) aCTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGt > 2:4083411/1‑100 (MQ=255) cTGGCAGCAACACTGCGCGCAGCTGCGTGTTGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTc < 2:1562615/100‑1 (MQ=255) cTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTc > 1:3884791/1‑100 (MQ=255) cTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTT‑TTaacaacaacggcg < 1:1285693/100‑5 (MQ=255) ggCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTACCTACGCGCCGTTGTTGTTAC‑AACAACTGTCgg < 1:2746191/100‑1 (MQ=255) gcagcaACACTGCGCGCAGCTGCGTGATGAACTTTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCg < 2:430166/98‑1 (MQ=255) cagcaACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGAt > 1:3506882/1‑100 (MQ=255) agcaACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATc > 2:2162357/1‑100 (MQ=255) gcaACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCg > 1:3572787/1‑100 (MQ=255) caACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGt < 2:11337/100‑1 (MQ=255) aaCACTGCGCGCAGCTTCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTa < 2:1088567/100‑1 (MQ=255) aaCACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTa > 1:2466847/1‑100 (MQ=255) cacTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTaaa > 1:3925040/1‑100 (MQ=255) cTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAAcc > 2:3385447/1‑100 (MQ=255) cgcgcAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGc > 1:4103530/1‑100 (MQ=255) gcgcAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCg < 2:3262499/100‑1 (MQ=255) cgcAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCgg < 2:3805104/100‑1 (MQ=255) cAGCTGTGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTAGGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGAt > 1:3787527/1‑100 (MQ=255) aGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGAtt > 1:760035/1‑100 (MQ=255) gCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTg < 2:3847843/100‑1 (MQ=255) gTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACTCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGcgtcg > 1:3319997/1‑100 (MQ=255) gTGATGAACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGtgtcg < 1:2080955/100‑1 (MQ=255) tgatgaACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGcgtcgt < 2:2351667/100‑1 (MQ=255) atgaACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGa < 2:3106332/100‑1 (MQ=255) atgaACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGa > 2:67109/1‑100 (MQ=255) atgaACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGa < 2:3835064/100‑1 (MQ=255) atgaACATTCCTGGCGTTACGACCAGTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGa < 2:3624501/100‑1 (MQ=255) tgaACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGAc > 2:3019064/1‑100 (MQ=255) tgaACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGAc > 2:1072181/1‑100 (MQ=255) tgaACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGAc > 1:1496281/1‑100 (MQ=255) gaACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACACCTGTCGGATCGTAAACCTGCGGATTGCGTCGTGAcc < 1:2938675/100‑1 (MQ=255) gaACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGAcc < 2:1013537/100‑1 (MQ=255) gaACATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGAcc > 1:1762806/1‑100 (MQ=255) aaCATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTg > 2:1171345/1‑96 (MQ=255) aCATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACcan < 2:2055826/100‑2 (MQ=255) aCATTCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACcac < 2:1739065/100‑1 (MQ=255) ttCCTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGa < 1:977128/100‑1 (MQ=255) ccTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGAtg > 1:3675713/1‑100 (MQ=255) cTGGCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGTGTCGTGACCACAGAtgt < 2:3528416/100‑1 (MQ=255) ggCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTgg > 1:3593509/1‑100 (MQ=255) gCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCTGATTGCGTCGTGACCACAGATGTggg < 1:2255561/100‑1 (MQ=255) gCGTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTggg < 2:1765198/100‑1 (MQ=255) gTTACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACACCTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGgc > 1:2482087/1‑100 (MQ=255) tACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGgcag > 2:2624987/1‑100 (MQ=255) tACGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGgcag < 2:938438/100‑1 (MQ=255) aCGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGgcagc > 2:785130/1‑100 (MQ=255) cGACCATTCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGgcagca > 2:1957477/1‑100 (MQ=255) | TTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCA‑TCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCA > NC_000913/3951498‑3951690 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |