| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,979,486 | IS5 (+) +4 bp | intergenic (‑271/‑264) | insA ← / → uspC | IS1 repressor TnpA/universal stress protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1979486 = | 1 (0.010) | 280 (1.630) | 113/198 | 0.1 | 99.6% | intergenic (‑271/‑267) | insA/uspC | IS1 repressor TnpA/universal stress protein |
| ? | NC_000913 | 2101749 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 1979489 | 1 (0.010) | 269 (1.560) | 111/198 | 0.1 | 99.6% | intergenic (‑274/‑264) | insA/uspC | IS1 repressor TnpA/universal stress protein |
| ? | NC_000913 | = 2290113 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
Only 100 of 520 total aligned reads displayed.
AAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTT > NC_000913/1979390‑1979588 | ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa < 1:1006068‑M1/4‑1 (MQ=255)aaaaTAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTaa < 1:3557277/100‑1 (MQ=255) aaaTAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAg < 2:1082453‑M1/100‑2 (MQ=255) caaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAt < 1:1614397‑M1/5‑1 (MQ=255) caaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcatattcgcaccttccCTAAt < 2:1113535‑M1/5‑1 (MQ=255) aaggcatttacgggagaaaaaatcggctcaaacatgaagaactgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTa > 2:3483329‑M1/94‑100 (MQ=255) catttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATa > 1:4036823‑M1/90‑100 (MQ=255) catttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATa < 1:2015941‑M1/11‑1 (MQ=255) tttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccatccCTAATTAAATACa < 2:2449728‑M1/13‑1 (MQ=255) ttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACaa < 1:1824754‑M1/14‑1 (MQ=255) aCCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcg > 1:310709‑M1/1‑90 (MQ=255) ccGTAAATAATCATCTGCTATAAATCATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcn < 2:1685493‑M1/99‑11 (MQ=255) ccGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcga < 2:223093‑M1/100‑12 (MQ=255) cgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACaaaga < 2:263620‑M1/17‑1 (MQ=255) cgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACaaaga < 1:2680298‑M1/17‑1 (MQ=255) aataatCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaag < 1:3137833‑M1/100‑17 (MQ=255) aataatCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaag < 2:2946865‑M1/100‑17 (MQ=255) agaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAgg < 1:3641593‑M1/21‑1 (MQ=255) atcatcTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccc > 2:3275353‑M1/1‑80 (MQ=255) atcatcTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccc < 1:3812757‑M1/100‑21 (MQ=255) catcTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTAGTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctg < 2:865266‑M1/100‑23 (MQ=255) aatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGcaacaa > 2:54723‑M1/74‑100 (MQ=255) atcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTGATTAAATACAAAGAAAGGCAACAAt < 2:4059302‑M1/28‑1 (MQ=255) tcggctcaaacatggagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATc > 1:3059507‑M1/72‑100 (MQ=255) gCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatg > 1:550865‑M1/1‑73 (MQ=255) gCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatg > 2:3128459‑M1/1‑73 (MQ=255) gCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatg < 1:3330555‑M1/100‑28 (MQ=255) cTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAGggaaggtgcgaacaagtccctgatatga < 1:2949011‑M1/100‑29 (MQ=255) aaataaTCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatc < 1:3276475‑M1/100‑33 (MQ=255) aacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaat < 1:3863076‑M1/37‑1 (MQ=255) ataatCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcat > 1:1452692‑M1/1‑66 (MQ=255) atgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccATAATTAAATACAAAGAAAGGCAACAATCAACttaatgtt < 2:333242‑M1/40‑1 (MQ=255) tgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatgtta < 1:914946‑M1/41‑1 (MQ=255) tgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatgtta < 2:1776401‑M1/41‑1 (MQ=255) atCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtt > 1:2302038‑M1/1‑63 (MQ=255) agaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatgttaatg > 2:2171703‑M1/57‑100 (MQ=255) agaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatgttaatg > 2:1330070‑M1/57‑100 (MQ=255) gaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatgttaat < 2:3898731‑M1/43‑1 (MQ=255) cATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatct > 2:3733774‑M1/1‑55 (MQ=255) gCAATACCAGATAAGCTATTTTTAAACATACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgga > 2:795025‑M1/1‑52 (MQ=255) gCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgcacaagtccctgatatgagatcatgtttgtcatctgga > 2:1843720‑M1/1‑52 (MQ=255) atgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGtttt > 2:2985222‑M1/48‑100 (MQ=255) tgactgagtcagcagagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAAGCAACTTAACGTTAATGAAATGttt > 2:1395107‑M1/47‑98 (MQ=255) aaTACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagc < 2:255186‑M1/100‑51 (MQ=255) aCCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccat < 1:1362698‑M1/100‑54 (MQ=255) aCCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccat > 1:6671‑M1/1‑47 (MQ=255) aCCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccat < 1:1918266‑M1/100‑54 (MQ=255) agtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACatata > 2:1706681‑M1/41‑100 (MQ=255) agtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACatata > 1:1742613‑M1/41‑100 (MQ=255) agtcagccgagaagaatttccccgcttattcacaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACatata > 2:1561891‑M1/41‑100 (MQ=255) gATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaa > 2:1656646‑M1/1‑43 (MQ=255) tcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATAtt > 2:2732881‑M1/39‑100 (MQ=255) cagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTa < 2:3619695‑M1/63‑1 (MQ=255) cagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTa > 2:3840334‑M1/38‑100 (MQ=255) gCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg < 2:913755‑M1/100‑63 (MQ=255) gCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg > 1:399581‑M1/1‑38 (MQ=255) ccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAACGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAAcc < 2:1882788‑M1/66‑1 (MQ=255) tttttAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca > 1:1178504‑M1/1‑34 (MQ=255) gaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACtt < 1:2406014‑M1/70‑1 (MQ=255) ttAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatca < 1:1490439‑M1/100‑70 (MQ=255) aaaCAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatg < 1:943164‑M1/100‑72 (MQ=255) ttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAAt < 2:3022837‑M1/77‑1 (MQ=255) aCAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgag > 1:483104‑M1/1‑27 (MQ=255) cAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagt > 2:723377‑M1/1‑26 (MQ=255) cAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagt < 1:2510393‑M1/100‑75 (MQ=255) cAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcagatcg > 2:2090462‑M1/1‑26 (MQ=255) gatctcttaccGCACAACAAACTAAggaaggtgcgaacaagtccctggtatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc < 1:1256825‑M1/95‑76 (MQ=255) ccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCgg < 1:2243047‑M1/81‑1 (MQ=255) cTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctggtatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcagatc > 2:1256815‑M1/1‑20 (MQ=255) cTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaa > 1:3746861‑M1/1‑20 (MQ=255) attcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATc < 2:3101249‑M1/87‑1 (MQ=255) aCCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactt > 2:3236085‑M1/1‑17 (MQ=255) aCCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactt < 2:685126‑M1/100‑84 (MQ=255) ttcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTATTACATATATTAACCACTTGTTTAATGCGGAGAATCa < 2:430990‑M1/88‑1 (MQ=255) cGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttac < 1:3476241‑M1/100‑86 (MQ=255) cGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttac > 2:483199‑M1/1‑15 (MQ=255) cgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGt < 2:3984083‑M1/90‑1 (MQ=255) gcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTa < 1:3415963‑M1/91‑1 (MQ=255) gcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTGAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGt > 2:2680267‑M1/10‑99 (MQ=255) caccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTac > 1:80074‑M1/9‑100 (MQ=255) accttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTaca > 1:2126154‑M1/8‑100 (MQ=255) tccgatctaaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcg < 1:516147‑M1/94‑91 (MQ=255) aCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgac < 2:1179442‑M1/100‑96 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca < 1:2736082‑M1/100‑97 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca > 2:2871781‑M1/1‑4 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca > 1:3227298‑M1/1‑4 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca > 1:3599165‑M1/1‑4 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca > 1:4099394‑M1/1‑4 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca > 2:1452293‑M1/1‑4 (MQ=255) cTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTAtttt < 2:1951429/100‑1 (MQ=255) tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacag > 1:1076789‑M1/1‑3 (MQ=255) tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacag < 1:1097916‑M1/100‑98 (MQ=255) tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacag < 1:1400559‑M1/100‑98 (MQ=255) tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacag < 1:1943231‑M1/100‑98 (MQ=255) tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacag > 2:233382‑M1/1‑3 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt > 2:1487741‑M1/1‑2 (MQ=255) aaTTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCt < 1:2607065/100‑1 (MQ=255) aaTTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCt > 1:2876218/1‑100 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtg < 1:1684473‑M1/100‑100 (MQ=255) aTTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCtt > 2:2803420/1‑100 (MQ=255) | AAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTT > NC_000913/1979390‑1979588 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |