| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,060,280 | (T)9→8 | 100% | intergenic (+50/‑167) | typA → / → yihL | GTP‑binding protein/putative DNA‑binding transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,060,272 | 0 | T | . | 92.5% | 512.4 / 34.3 | 133 | intergenic (+42/‑175) | typA/yihL | GTP‑binding protein/putative DNA‑binding transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (5/5); new base . (68/55); total (73/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.54e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 179 total aligned reads displayed.
ACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCA > NC_000913/4060173‑4060366 | aCGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTTAT‑TTATTACCTGCAATCGCTGGCAGGt < 2:674957/100‑1 (MQ=255)aCGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCATCGCTGGCAGGt < 2:1953897/100‑1 (MQ=255) cGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGGtt > 1:441895/1‑100 (MQ=255) cGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGGtt > 1:1162137/1‑100 (MQ=255) cGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGGtt > 2:341018/1‑100 (MQ=255) cGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGGtt > 2:1249188/1‑100 (MQ=255) gTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCATCGCTGGCAGGtt < 1:1852899/99‑1 (MQ=255) cACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCATCGCTGGCAGGttttt < 1:1994523/100‑1 (MQ=255) aCCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGGtttttt < 2:2818476/100‑1 (MQ=255) aCCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGGtttt > 2:56559/1‑98 (MQ=255) ccTGACGGAAAACGTTCGTTGTCGCGCTTACCGTGCAACGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCATCGCTGGCAGGtttttt < 1:171345/99‑1 (MQ=25) ccTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAATACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGGttttttt < 2:1549760/100‑1 (MQ=255) ccTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGGttttttt > 2:2904830/1‑100 (MQ=255) ccTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGGttttttt < 2:2207932/100‑1 (MQ=255) cTGACGGAAAACGATCGTCGCCGCGCCAACCGCGTACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCATCGCTGGCAGGtttttta < 1:344061/99‑2 (MQ=38) cTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGGtttttttt < 1:3695125/100‑1 (MQ=255) cTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGGtttttttt > 1:2827237/1‑100 (MQ=255) tGACGGAAAACTTTCTTCGCTGCGCTAATCTCGCACCGAAAGACGATTAATTTCGTTTTTTATTCAT‑AAAAAACTTGTTATCGCTGGCAGGtttttta < 2:271046/98‑2 (MQ=255) tGACGGAAAACGATCGTCGCCGCGCCAACCGCTCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCATCGCTGGCAGGttttttatg < 1:180461/100‑4 (MQ=38) tGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCATCGCTGGCAGGttttttatg < 1:208462/100‑4 (MQ=255) tGACGGAAAACGATCGTCGCCGCGCCAACCACGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGGttttttttg < 2:2646438/100‑2 (MQ=255) gACTGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAAACCTGCCATCGCTGGCAGGttttttatg < 2:655983/100‑4 (MQ=37) gACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGGttttttttgc > 1:2212335/1‑98 (MQ=255) aCGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGGttttttttgac < 2:546263/100‑4 (MQ=255) cGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCATCGCTGGCAGGttttttatgact < 2:3768296/100‑7 (MQ=37) cGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGGttttttttgcat > 1:1638558/1‑96 (MQ=255) ggAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTg > 1:3379183/1‑100 (MQ=255) ggAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTg > 1:902431/1‑100 (MQ=255) aaaaCGATCGTCGCCGCGCCAACCGCGCACCGAAAGACTATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTc < 1:2402528/100‑1 (MQ=255) aaaaCGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTACTCAT‑AAAAAACCTGCCAGCCACGGCAGTctttttttcc > 2:3757962/1‑93 (MQ=255) aaCGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGt < 1:3528242/100‑1 (MQ=255) aaCGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTACCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGt > 1:431629/1‑100 (MQ=255) gATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAg < 2:1699289/100‑1 (MQ=255) cgatctgccgcGCCAACCGCGCACCGAAAGTCGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAgc < 1:2995110/94‑1 (MQ=255) tcgtcgCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCGGCCAGCGATGGCAGGTTTTTTTTTGCCTGTCGTGAg < 1:2753996/99‑1 (MQ=255) cgtcgCCGCGCCAACCGCGCACTGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAgcgc < 1:1485521/100‑1 (MQ=255) gtcgCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTAAAAGCAATGGCAGG‑AATTTTTTGCCTGTCGTGAGCGca > 1:2196104/1‑100 (MQ=255) tcgCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGcac < 1:2257241/100‑1 (MQ=255) tcgCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGGTTTTTAGTCAT‑AAAAGACCTGCCAGCGATCGCACG‑TTTTTTTTGCCTGTCGTGAGCGcac < 2:3461371/100‑1 (MQ=255) cgccgcGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGcaca < 1:1103681/100‑1 (MQ=255) gccgcGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAgcagatcg > 2:2995083/1‑94 (MQ=255) gccgcGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCacac > 2:829087/1‑100 (MQ=255) gcgcCAACCGCGCAACGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCaa > 2:927589/1‑100 (MQ=255) ccAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCATGTAGTGAGCGCACACCAATGc > 1:3114709/1‑100 (MQ=255) cAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCg > 2:58965/1‑100 (MQ=255) cAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCg > 1:2096032/1‑100 (MQ=255) aaCCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGCTGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGa > 2:1824498/1‑100 (MQ=255) aaCCGCGCACCGAAAGACGATTAAAATCATTTTTTAGTGAT‑AAAAAACATGACAGCGATGACAGG‑TTATTTTAACTAGTAGTGAACGCACACCAATgaga > 2:1016195/1‑100 (MQ=255) aCCGCGTACCGAAAGACGATTAATTTCGTTGTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCA‑GTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAg < 2:755609/100‑1 (MQ=255) aCCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAg < 1:3450391/100‑1 (MQ=255) aCCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAg > 2:42099/1‑100 (MQ=255) cgtgtaCCTAAAGACGATTAATTTCGTTTTTTGGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGGCTGTCGTTAGCGCACACCAATGCGAGTa < 2:1641151/95‑1 (MQ=255) cgcACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTAtc < 2:2028937/100‑1 (MQ=255) cgcACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTAtc < 2:73504/100‑1 (MQ=255) cACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTAtctc > 2:3100297/1‑100 (MQ=255) cACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTAtctc > 2:2445727/1‑100 (MQ=255) aCCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTcc > 1:599722/1‑100 (MQ=255) ccGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAATACCTGCCAGCGATGGCAGG‑TTTTTTGTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTccc < 1:3609338/100‑1 (MQ=255) cGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCt < 2:3205365/100‑1 (MQ=255) ggaaGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGGTTTTTTTTT‑CCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCtt > 1:101655/3‑100 (MQ=255) gAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCtt > 2:3807252/1‑100 (MQ=255) ttAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCtg < 1:1008336/100‑1 (MQ=255) aaTTTCGTTTTTTAGTCAT‑AAAAAACCTGTCAGCGATGGCAGGTTTTTTTT‑‑CCTGTCGTGAGCGCACACTAATGCGAGTATTTCCCTTATAAGTCTGTgg < 2:1673726/100‑1 (MQ=255) aTTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTgg > 1:882177/1‑100 (MQ=255) aTTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTgg < 1:3445799/100‑1 (MQ=255) aTTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTgg < 1:2598641/100‑1 (MQ=255) tttGGTTTTTTAGTCAT‑AAAACACCTGGCAGCGAGGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACCCCAATGCGAGTATCTCCCTTATAAGTCTGTGGt < 2:3706005/100‑1 (MQ=255) cGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTTAGCGCACACCAATGCGAGTATCTCCCTCATAAGTCTGTGATTAc > 2:3000141/1‑100 (MQ=255) gTTTTTTAGTTAT‑AAAAATCCTGCCAGTGATGGTAGGTTTTTTTTT‑CCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTAc < 1:766726/99‑1 (MQ=255) gTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACg > 1:2800691/1‑100 (MQ=255) gTTTTTTAGTCAT‑AAAAAACCTGCCAGATATGTCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACg < 1:2287015/100‑1 (MQ=255) gTCAT‑AAAAAACCTGCCAGCGAGGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTAGCTCCCTTATAAGTCTGTGGTTACGTCAATag > 2:3898826/1‑99 (MQ=255) gcaaaaaaaaCCTGCCATCGCTGGCAGG‑TTTTTTATGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATagag > 2:2774968/5‑100 (MQ=37) cAT‑AAAAAACCTGTCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAATTCTGTGGTTAAGTCAATata > 2:549861/1‑96 (MQ=255) cAT‑AAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATagaga < 2:2479935/100‑1 (MQ=255) cAT‑AAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGACAATagaaa > 1:3680476/1‑98 (MQ=255) cAT‑AAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAATATCTCCCTTATAAGTCTGTGGTTACGTCAATagaga > 1:596486/1‑100 (MQ=255) caaaaaaaaCCTGCCATCGCTGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCACTTATAAGTCTGTGGTTACGTCAATagaga > 1:1532326/4‑100 (MQ=37) aT‑AAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATagagag < 1:804374/100‑1 (MQ=255) aT‑AAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATagagag > 1:1888897/1‑100 (MQ=255) t‑AAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATagaga > 1:2837469/1‑98 (MQ=255) aaaaaaaaCCTGCCATCGCTGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATagagag > 1:3344987/3‑100 (MQ=38) aaaaaaaaCCTGCCATCGCTGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATagagag > 1:2957881/3‑100 (MQ=38) aaaaaaaCCTGCCATCGCTGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGc > 1:2725461/2‑100 (MQ=38) aaaaaaaCCTGCCATCGCTGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTAACGTCAATAGAGAGc > 1:3875849/2‑100 (MQ=38) aaaaaaCCTGCCATCGCTGGCAGGTTTTTTTTT‑CCTGTCATGAGCGCACACCCATGCAAGTATCTCTGTTATCAGTCTGTGGTTACGTAAATAGACAGCt > 2:3237417/1‑100 (MQ=21) aaaaaaCCTGCCATCGCTGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCt > 1:2324585/1‑100 (MQ=38) aaaaaaCCTGCCAGCGATGGCAGGTTTTTTTTT‑TTTTTCTTGAGCGCACAACAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCt > 2:191447/1‑100 (MQ=255) aaaaaaCCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGCGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCt > 2:191522/1‑100 (MQ=255) aaaaCCTGCCATCGCTGGCAGG‑TTTTTTATGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCttt > 1:1625109/1‑100 (MQ=38) aaCCTGCCATCGCTGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAATCTGTGGTTACGTCAATAGAGAGCTTTGt > 1:532916/1‑100 (MQ=38) ccTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTca > 1:1744835/1‑100 (MQ=255) cTGCCAGCGATGGCAGG‑TTTTTTTTGCTTGTCGTGAGCGCACACCAATGCGAGTATCTCTCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTcac > 2:2556234/1‑100 (MQ=255) tGCCAGTGATGGCAGG‑TTTTTTTTGCCTGTCTTGAGCGCATACCAATGCGAGTATCTCCCTAATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTcaca < 1:583367/100‑1 (MQ=255) gCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTcataa > 2:2163903/1‑97 (MQ=255) ccAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAAt > 2:3286128/1‑100 (MQ=255) cAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAAtt > 2:1757853/1‑100 (MQ=255) gCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTAt > 1:3748646/1‑100 (MQ=255) tGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGc < 2:2202317/100‑1 (MQ=255) gCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCa < 1:659932/99‑1 (MQ=255) | ACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT‑AAAAAACCTGCCAGCGATGGCAGGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTATCTGCA > NC_000913/4060173‑4060366 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |