| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,645,886 | (C)5→4 | 100% | coding (1440/2313 nt) | pbpC ← | penicillin‑insensitive murein repair transglycosylase; inactive transpeptidase domain protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,645,882 | 0 | C | . | 97.4% | 515.0 / 4.0 | 116 | coding (1444/2313 nt) | pbpC | penicillin‑insensitive murein repair transglycosylase; inactive transpeptidase domain protein |
| Reads supporting (aligned to +/- strand): ref base C (2/0); new base . (63/50); total (66/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.04e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.72e-01 | |||||||||||
Only 100 of 134 total aligned reads displayed.
GGTGCCCGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCGCCCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAACGCGGTATACGCTGCCG > NC_000913/2645784‑2645980 | ggTGCCCGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTTTCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACgccgcc < 2:1124181/100‑1 (MQ=255)agTGCCCGTTTTCCATGCCAGTGGGGCAACGCGCGGCAAAGCACTATCCGGCAAGGGTTGCGCTTCAACAGCCATAATCCAGCGAATGATCCACgccacc > 2:1907703/2‑100 (MQ=255) atGCCCGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCGccc > 2:2432846/2‑100 (MQ=255) tGCCCGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCGcccc > 2:1625434/1‑100 (MQ=255) tGCCCGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGATTGCGCTTCATCAGCCATAATCCGGCGAATCATCCAAACCAcccc > 1:3273379/1‑100 (MQ=255) gCCCGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCGccccg < 2:880232/100‑2 (MQ=255) gCCCGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCGccccg > 2:1360490/1‑99 (MQ=255) gCCCGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCGccccg > 1:3267246/1‑99 (MQ=255) cccGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCGccccga > 1:471812/1‑98 (MQ=255) cccGTTTTCCATGCCAGTGGGGCGACGAGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACgccgccgcg > 2:3719373/1‑96 (MQ=255) ccGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCGccccgac < 2:1077071/100‑4 (MQ=255) ccGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCGccccgac > 1:3766836/1‑97 (MQ=255) ccGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCGccccgac > 1:283502/1‑97 (MQ=255) ttttCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCgacgac < 2:986423/100‑1 (MQ=255) ttCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACAt < 2:947118/100‑1 (MQ=255) ccATGCCAGTGGGGCAACGCGCTGCAAGTAACTATCCACCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCTACGCCGCCCCC‑ACGACAtt > 2:2419845/1‑99 (MQ=255) cATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTaa > 1:2287009/1‑100 (MQ=255) cATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTACGCTTCATCAGCCATAATCCAGCAAATGATCCACGCCG‑CCCCGACGACATTaa > 1:20237/1‑100 (MQ=255) aTGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTaaa > 1:1707617/1‑100 (MQ=255) tGCCAGTGGGGCGACTCACGGCAACGCACTATCCCGCAAGGGTTGCGCTTCATCAGCCATAATCCTGCGAATGATCCACGCCG‑CCCCGACGACATTAAAg < 2:1940471/100‑1 (MQ=255) tGCCAGTGGGGCGACGCGCGGTAAGGCATTATCTGGTAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAg < 1:3456588/100‑1 (MQ=255) gCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAgg > 2:3804663/1‑100 (MQ=255) tGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGtt > 1:3178332/1‑100 (MQ=255) ggggCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTc < 1:2723285/100‑1 (MQ=255) gCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTAATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAag < 1:1658036/100‑1 (MQ=255) gACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAagca > 2:1247519/1‑100 (MQ=255) gACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGACAAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAagca > 1:381035/1‑100 (MQ=255) aCGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAagcag > 1:2512294/1‑100 (MQ=255) cgcgcgGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGTCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAagcag > 1:927062/1‑99 (MQ=255) cgcgcgGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAagcagc > 1:2802750/1‑100 (MQ=255) cgcgcgGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAagcagc < 1:91491/100‑1 (MQ=255) gcgcgGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCg < 2:534079/100‑1 (MQ=255) ggCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATc > 2:2064929/1‑100 (MQ=255) gCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCg > 1:3031574/1‑100 (MQ=255) aatgctcTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAagc < 1:1345097/83‑1 (MQ=255) aaGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGCTCGTc > 2:1272616/1‑100 (MQ=255) aaGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATACACGCCG‑CCCCGACGACATTAACGGCCCTTCAAGCAGCGGATCg > 2:893369/1‑98 (MQ=255) aGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCa < 1:3701376/100‑1 (MQ=255) aGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCa > 2:3248529/1‑100 (MQ=255) ggCACTATCCGGCAAGGGGTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCgcc > 2:233041/1‑96 (MQ=255) gCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAgg > 1:1995124/1‑100 (MQ=255) cACTATCCGGCAAGGGCTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGCCGACATTAAAGGCCGTTCAAGCAGCGGCTCGTCAg > 2:30505/1‑98 (MQ=255) cTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAACAGCAGAtcatca > 1:3815934/1‑95 (MQ=255) aTCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTa < 1:3804702/100‑1 (MQ=255) tCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTaa < 2:471805/100‑1 (MQ=255) ccGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAg > 2:902215/1‑100 (MQ=255) ggCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAgcg < 2:2155340/100‑1 (MQ=255) ggCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAgcg > 1:943414/1‑100 (MQ=255) gCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAgcgc < 1:3271802/100‑1 (MQ=255) gggTTGTGCTTCATCAGCCATCATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAAt < 2:3773097/99‑1 (MQ=255) gggTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAAtt < 2:2015526/100‑1 (MQ=255) ggTTGCGCTTCATCAGCCATAATCCGGAGAATGATACACGCC‑ACCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAAttt > 2:2438783/1‑100 (MQ=255) gTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTtg < 1:3880339/100‑1 (MQ=255) attGCACTTCATCAGCCATAATCCGGCAAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTACAAGCAGCGGATCGTCAGGCTGTAAGCGCAAttt > 2:3208808/2‑99 (MQ=255) gcgcTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTtgc > 2:230935/1‑98 (MQ=255) cttcttTAGCAATAATCCGGCGAATGTTCCTCGTCG‑CTTTTAGGACATTAAAGTCTGTTATTGCAGCGGATCGTGAGTCTGTAAACTCAAATtgcctt < 2:217998/98‑2 (MQ=255) cTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTtgcctgcc < 2:818041/100‑1 (MQ=255) cTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTtgcctgcc < 2:1792418/100‑1 (MQ=255) tcatcaGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCtt < 2:1908585/100‑1 (MQ=255) caGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCg > 1:240568/1‑100 (MQ=255) caGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCATCAAGCTATAAGCGCAATTTGCCTGCCTTGCCg > 1:854111/1‑100 (MQ=255) gCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTg > 1:3013986/1‑100 (MQ=255) gCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATAGTAAGACTGTAAACGCAATTTGCATGCCTTGCAGTg > 1:2361330/1‑100 (MQ=255) gCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGACCGTCCGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTg > 2:393636/1‑100 (MQ=255) gCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAACGCCGTTCAAGCAGCGGACCGTCCGGCTGTAAGCGCAATTTGCCTGCCTTGcc > 2:2037310/1‑97 (MQ=255) ccATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTgg > 2:3097244/1‑100 (MQ=255) ccATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTg < 1:977715/99‑1 (MQ=255) cATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGc < 1:1669514/100‑1 (MQ=255) cATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGc > 2:3612199/1‑100 (MQ=255) cATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAAGCTGTAAGAGCAATTTGCCTGCCTTGCCGTGGc > 1:1349641/1‑100 (MQ=255) aTAATCCGGCGAATGATCCACGCCG‑CTTCGATGACATTAAAGGTCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGc < 1:4259/99‑1 (MQ=255) aTAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTATAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCg < 1:1366076/100‑1 (MQ=255) aTAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGc < 2:1276221/99‑1 (MQ=255) aTAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCg < 2:1213799/100‑1 (MQ=255) aaTCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAg > 1:90592/1‑100 (MQ=255) aaTCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGGGGCGAg > 1:3526543/1‑100 (MQ=255) aTCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGc < 1:2102580/100‑1 (MQ=255) tCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCa > 2:614623/1‑100 (MQ=255) cGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCaaa > 2:1002332/1‑100 (MQ=255) cGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCaa < 1:1312401/99‑1 (MQ=255) cGGCGAATGATCCACGCCG‑CCCAGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCaaa > 2:820721/1‑100 (MQ=255) ggCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAAAACAATTTACCTGCCTTGACGTGGCGAGTaaa > 1:1159235/1‑99 (MQ=255) gCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAAcg < 2:2024942/100‑1 (MQ=255) cGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAAcgc > 1:2603224/1‑100 (MQ=255) gAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAAcgcg < 1:3612238/100‑1 (MQ=255) ccgatctCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAAcgcg < 2:1294503/94‑1 (MQ=255) aaTGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAACGCgg < 1:558219/100‑1 (MQ=255) aTGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAACGCGGt > 1:3551612/1‑100 (MQ=255) tGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAACGCGGta < 2:3013919/100‑1 (MQ=255) tGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAACGCGGta < 2:818779/100‑1 (MQ=255) gATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAACGCGGt > 2:2338794/1‑98 (MQ=255) aTCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAACGCGGtata > 1:662220/1‑100 (MQ=255) aTCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAACGCGGtata > 1:2489835/1‑100 (MQ=255) tCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAACGCGGTATAc > 1:3463388/1‑100 (MQ=255) ccACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAAcgcgagatcgg > 1:1294517/1‑93 (MQ=255) ccACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAACGCGGTATACg > 1:3665974/1‑100 (MQ=255) cACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAACGCGGTATACGc < 1:3570273/100‑1 (MQ=255) cACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAACGCGGTATACGc > 2:3896424/1‑100 (MQ=255) cACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAACGCGGTATACGc > 2:1789876/1‑100 (MQ=255) gccCCCGACGATATCAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAACGCGGTATACGCTgccg < 2:3377771/100‑1 (MQ=255) | GGTGCCCGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCGCCCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAACGCGGTATACGCTGCCG > NC_000913/2645784‑2645980 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |