| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,765,794:1 | (C)7→8 | 100% | intergenic (‑18/‑124) | yfjM ← / → rnlA | CP4‑57 prophage; uncharacterized protein/CP4‑57 prophage; RNase LS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,765,787 | 1 | . | C | 78.6% | 377.7 / 114.1 | 145 | intergenic (‑11/‑131) | yfjM/rnlA | CP4‑57 prophage; uncharacterized protein/CP4‑57 prophage; RNase LS |
| Reads supporting (aligned to +/- strand): ref base . (18/13); new base C (52/61); total (70/75) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.11e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 159 total aligned reads displayed.
TCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGA > NC_000913/2765691‑2765885 | tgctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑cc‑c‑c < 2:3532161/99‑1 (MQ=255) tgGCGAATAATTACTAAGTATCGAGTTGCTTCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATCGACATCATCCCCCCTCTTGTGGACTG‑‑cc‑c‑c‑c‑c‑cc > 2:380316/1‑99 (MQ=255) tgGCGAATAATTACTAAGTATCGAGTTGATGCTTGGTGAGATAAGGAAGAGATTACCGAAAAGATGGACACCATCGACCAGTTTGTGGACTg > 2:2940700/1‑92 (MQ=255) ggCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑cc‑c‑c‑c‑cac > 2:3130936/1‑97 (MQ=255) gCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑cc‑c‑c‑c‑c‑ccg < 2:2800607/99‑3 (MQ=255) aataatTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑cc‑c‑c‑c‑c‑cccggt < 1:573792/99‑6 (MQ=255) taatTACTAAGTATCGAGTTGCTGCTTTGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCTTCCCCCATTTTATGGACTGC‑CC‑C‑C‑C‑C‑CGGTAg < 2:3773784/98‑1 (MQ=255) taatTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGAc > 2:2549257/1‑100 (MQ=255) atTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGa < 1:123977/100‑1 (MQ=255) ttACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTCTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAAACGa > 2:1317134/1‑99 (MQ=255) tACTAAGTATCGAGTTGCTGCTTGGTTATATTAGTAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATc < 1:349216/100‑1 (MQ=255) tACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCCTTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGAt > 2:26488/1‑99 (MQ=255) tACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CC‑C‑C‑C‑C‑CGGTAGACGATcc < 2:2823236/100‑1 (MQ=255) tccgatcttCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATcc < 1:99881/92‑1 (MQ=255) aCTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATcc < 1:2126295/100‑1 (MQ=255) cTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCt > 2:717284/1‑100 (MQ=255) aaGTATCGTGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACTGAAACGATGGAAATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGc < 1:1783689/100‑1 (MQ=255) aaGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGc < 2:3294771/100‑1 (MQ=255) aaGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCAATTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGc > 2:2058966/1‑100 (MQ=255) aaGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATAAACAATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGAAGATCCTGc > 1:3044131/1‑100 (MQ=255) gTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTAATGGACTC‑‑CC‑C‑C‑CAC‑CGATAGACGATCCTGcc > 1:3553009/1‑99 (MQ=255) aTCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCta < 1:1317148/100‑1 (MQ=255) tCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCtat < 1:2789113/100‑1 (MQ=255) aGTTTCTGCTTAGTGAGATCAGGAAGTGGTTACCGAAACTATTGACATCATCCCCCATTTTATATACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGt < 2:1492248/100‑1 (MQ=255) gTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGtt < 1:2296670/100‑1 (MQ=255) gTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CC‑C‑C‑C‑CACGGTAGACGATCCTGCCCTATAGt > 1:3783381/1‑99 (MQ=255) ttGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTg < 2:82175/100‑1 (MQ=255) tgctgcTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTgg < 1:2348898/100‑1 (MQ=255) gctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGa > 2:846102/1‑100 (MQ=255) ctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAg < 2:2453684/100‑1 (MQ=255) tgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGt < 2:2085248/100‑1 (MQ=255) tgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTg < 2:3127447/100‑1 (MQ=255) tgctTGGTGAGACCAGGAAGAGGGTACCGAAACGATGGACATCATCTCCCATTTTATGGAATA‑‑CC‑C‑C‑G‑G‑CGGAAGATGATCATACCATATAGTTGCAGTg > 2:1361991/1‑100 (MQ=255) tGGTGAGATCAGTAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGccc < 2:1722268/100‑1 (MQ=255) tGGTGAGATCAGGAAGAGGTTACCGAAACTATGGACATCATCCTCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGccc < 1:1764058/100‑1 (MQ=255) ggTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CC‑CAC‑C‑C‑CGGAAGAAGATACTGCCCTATAGTTGGAGTGccc > 1:3171328/1‑99 (MQ=255) gTGAGATCAGGAAGAGGTTACCGAAACTATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGccccc < 1:1496617/100‑1 (MQ=255) gTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGccccc > 2:1549752/1‑100 (MQ=255) gTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGccccc < 1:123418/100‑1 (MQ=255) gTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGccccc < 1:1852091/100‑1 (MQ=255) tGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCGCATTTTGTGGACTG‑‑CC‑C‑C‑CGC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCt > 2:2122984/1‑100 (MQ=255) tGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCt < 1:3373821/100‑1 (MQ=255) agaTCAGGAAGAGGTTACCGAAACGATGGACATCATACCCCATTTTGTAGACTGC‑CC‑C‑C‑C‑C‑CGGTAAACTATCCTGCCCTATAGGTGGAGTGCCCCCTAt > 2:1404348/1‑100 (MQ=255) gaTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTAtt > 2:3112178/1‑100 (MQ=255) aTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACAATCCTGCACTATAGATGGAGTGCCCCCTATTc > 1:596220/1‑100 (MQ=255) ttaGGTAGAGGTTACTGAAATGATTGACATCATCTCCTATTTTGTGGAATG‑‑CC‑C‑CTC‑A‑CGGTAGACGATCCTGCCCGATAGTTGGAGTGCCCCCTATTc < 1:758677/97‑1 (MQ=255) tCAGGAAGAGGTTACCGAAACGATGGACATCATTCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCa < 1:45466/100‑1 (MQ=255) tCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCa < 2:3103539/100‑1 (MQ=255) tCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCa < 1:2629083/100‑1 (MQ=255) cAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAg > 1:2692814/1‑100 (MQ=255) aGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAgg < 2:733234/100‑1 (MQ=255) aGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAgg > 2:1907184/1‑100 (MQ=255) ggAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTg < 2:448067/100‑1 (MQ=255) gAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGCCAGACGATCCTGCCCTATCGCTGGAGCGCCCCCTACTCAGGt > 2:2030934/1‑99 (MQ=255) aaGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTgg < 2:1979561/100‑1 (MQ=255) agagGTTACCGTAATGATGAACATAATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTg < 1:3572353/98‑1 (MQ=255) agagGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATCGTTGGAGTGCCCCCTATTCCGGTGGc > 2:3492355/1‑100 (MQ=255) agagGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGc < 2:2023381/100‑1 (MQ=255) tACCGAAACGATGGACATCATCCCCCATTTTGTGTACTT‑‑CC‑C‑C‑C‑C‑CGTTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAAttt < 1:1111684/100‑1 (MQ=255) ctgAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAATTGGAAAGCACACTATTCAGGTGGCTAAATTTa > 1:746249/3‑100 (MQ=255) ccGAAACGGTGGACATCATCCCCCATTTTGTGGACTG‑‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTTGAGTGCCCCCTATTCAGGTGGCTAAATTTAg < 2:998640/100‑1 (MQ=255) ccGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTa > 1:3613633/1‑100 (MQ=255) cGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTACCACCTATTCAGGTGGCTAAATTTa > 1:1373174/1‑99 (MQ=255) cGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAg < 2:3278889/99‑1 (MQ=255) cGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGc > 2:251564/1‑100 (MQ=255) naaaCGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGc > 2:2703625/2‑100 (MQ=255) gAAACGATGGACCTCATCCCCCATTTTGTGGACTGT‑CC‑C‑C‑C‑C‑CAGTATACGATGGCGACCTATAATTGGAGTGCCGCCTATTCAGATGGCTAAATTTAGc < 2:36878/100‑1 (MQ=255) aaaCGATGTACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCa < 1:2453080/100‑1 (MQ=255) aaaCGATGGCCATCATCCGTCATTTTGTGGACTG‑‑CCAC‑C‑A‑C‑CGGTTGACGGTCCTGCGCAATGGTTGGAGTGCCACATATCAAGGTGGTTaatgtttgct < 2:2277401/100‑9 (MQ=255) aaCGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCa < 2:44689/99‑1 (MQ=255) gATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATc < 1:1066165/100‑1 (MQ=255) tGGACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCaa < 2:2447236/100‑1 (MQ=255) ggACATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAAt < 1:377979/100‑1 (MQ=255) gACATCATCCCCCATTTTGTGGACTG‑‑CC‑C‑C‑CTC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATa < 2:2634025/100‑1 (MQ=255) aCATCATCCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATac < 1:908340/100‑1 (MQ=255) aCATCATCCCCCATTTTGTGGACTG‑‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGATTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATaca > 1:3638063/1‑100 (MQ=255) catcCCCCATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTAGCTAAATTTAACAAATAAATacac > 1:3793409/1‑98 (MQ=255) cccccATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAg > 2:3855451/1‑100 (MQ=255) cccccATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAg > 2:2162883/1‑100 (MQ=255) ccccATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgg > 1:2295103/1‑100 (MQ=255) ccccATTTTGTGCACTGCCCC‑C‑C‑C‑C‑CGGTATACGATCCTGCCCTATATTTGGATTTCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAg < 1:3330322/100‑1 (MQ=255) ccccATGTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGCAGACGATCCTGCCCTATAATTGGATCGCCGCCGATTCCGGTGGCTAAATTCCGCAAATCAATACCATTCatg > 1:1942477/1‑98 (MQ=255) cccATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAggg < 1:535590/100‑1 (MQ=255) cccATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTAAGGTGGCTAAATTTAGCAAATCAATACACTTCAggg > 1:2033373/1‑100 (MQ=255) cccATTTTGTGGACTG‑‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggg > 1:3292940/1‑100 (MQ=255) cccATTTTGTGGACTG‑‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggg > 1:2596708/1‑100 (MQ=255) ccATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggg < 2:1123924/100‑1 (MQ=255) cATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAggggg > 1:2522406/1‑100 (MQ=255) cATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAggggg < 1:883267/100‑1 (MQ=255) cATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggg < 2:1829432/99‑1 (MQ=255) cATTTTGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggg < 2:1341216/99‑1 (MQ=255) tttGTGGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATAAATACACTTCAGGGGGGta > 2:3463027/1‑100 (MQ=255) gtgGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGtatta > 1:3195971/1‑100 (MQ=255) gtgGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCATATTAAGGTGGATAAATTTAGCAAATCAATACACTTCAGGGGGGtatta > 1:183434/1‑100 (MQ=255) tgGACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGtattat > 1:3509659/1‑100 (MQ=255) ggACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTattatt > 2:694707/1‑100 (MQ=255) ggACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTattatt > 2:1163039/1‑100 (MQ=255) ggACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAAGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTattatt > 1:3277453/1‑100 (MQ=255) gACTGC‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTg > 2:36985/1‑100 (MQ=255) g‑‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGATGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTaga > 2:1820354/1‑99 (MQ=255) | TCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CC‑C‑C‑C‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGA > NC_000913/2765691‑2765885 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |