| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,809,774:1 | (T)7→8 | 100% | coding (158/738 nt) | ygaZ → | putative L‑valine exporter, norvaline resistance protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,809,767 | 1 | . | T | 95.8% | 437.1 / 10.8 | 143 | coding (151/738 nt) | ygaZ | putative L‑valine exporter, norvaline resistance protein |
| Reads supporting (aligned to +/- strand): ref base . (3/3); new base T (68/66); total (74/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 168 total aligned reads displayed.
GGATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCAC > NC_000913/2809668‑2809857 | ggATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑g < 1:1308857/100‑1 (MQ=255) gATGCAAAGACAGTTTACCGATTTTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTATCCTCTCGAAAGC‑G‑‑t < 2:1819538/100‑1 (MQ=255) gATGCAAAGACAGTTTACCGATTGTTATTAGTTATCTTCCGGTGGCCTTTGCGTTCGGTCTGAATACGACACGTATGGGATACTCTCCTCTAGAAAGC‑g > 1:1745550/1‑99 (MQ=255) tGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑‑ttt > 1:3373527/1‑100 (MQ=255) gCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑‑tttt > 2:3215325/1‑100 (MQ=255) gCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑‑tttt > 1:355415/1‑100 (MQ=255) gCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑‑tttt < 1:525356/100‑1 (MQ=255) cAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑‑ttttt > 2:246787/1‑100 (MQ=255) cAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑‑ttttt > 2:3514158/1‑100 (MQ=255) aaGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑‑ttttt‑tt > 2:304751/1‑100 (MQ=255) aaGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑‑ttttt‑tt < 2:3493961/100‑1 (MQ=255) aaGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑‑ttttt‑tt < 1:1755088/100‑1 (MQ=255) aGACAGTTTACCGATTGTTATTAGTTATATTCCTGTGGCCTTTGCGTTCGTTCTGAATGCGACCCGTCTGTGATTCTCTCCTCTCGAAAGC‑G‑‑ttttt‑tt < 2:416630/99‑1 (MQ=255) aGACAGTTTACCGATTGTTATTAGTTATATTCCAATGGCTTTTGTGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑‑ttttt‑ttt < 1:2093119/100‑2 (MQ=255) aGTTTACCGATTGTTATTAGTTATATTCCGGTGGCTTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑‑ttttt‑tttctcc < 1:1707259/100‑6 (MQ=255) aGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑‑ttttt‑tttctcc < 1:911807/100‑6 (MQ=255) gTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCt > 1:1286100/1‑100 (MQ=255) gTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCt < 1:3612940/100‑1 (MQ=255) gTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCt > 1:2359382/1‑100 (MQ=255) gTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑‑ttttt‑tttctcc < 1:1854218/99‑6 (MQ=255) gTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTATCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCt > 1:2082415/1‑100 (MQ=255) gTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGAACAGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCt > 1:310879/1‑100 (MQ=255) gTTTACCGAGTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCt > 2:2053633/1‑100 (MQ=255) tACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGca < 1:3565564/100‑1 (MQ=255) aCCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGcat > 2:106697/1‑100 (MQ=255) ccGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGcatc > 2:1779891/1‑100 (MQ=255) cGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGcatca < 2:1241407/100‑1 (MQ=255) cGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGcat < 1:1010500/98‑1 (MQ=255) gATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGcatcat > 1:2214794/1‑100 (MQ=255) gATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGcatcat < 2:3373489/100‑1 (MQ=255) gATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGcatcat > 2:3574422/1‑100 (MQ=255) aTTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCAtt < 1:1541837/100‑1 (MQ=255) ttGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCAttt < 2:1078786/100‑1 (MQ=255) gTTCTTAGTTATATTCCAGTAGCCTATGCGTGAGGTCTGAATGCGACCCGTATGGGATTCTCACCTATCGAAAGC‑GA‑TTTTT‑TTATCGTTCGTCATTTa > 2:1622647/1‑99 (MQ=255) gTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTAt < 2:2622705/100‑1 (MQ=255) ttattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCTTGCATCATTTATg > 2:1766892/1‑100 (MQ=255) tattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGc > 1:2629688/1‑100 (MQ=255) tattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGc > 2:1022263/1‑100 (MQ=255) ttaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAg < 1:2738039/100‑1 (MQ=255) taGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAgg < 1:2825055/100‑1 (MQ=255) gTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGgcg > 1:1319520/1‑100 (MQ=255) ttATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATAAATGATGCAggaga < 1:2562560/100‑4 (MQ=255) tataTTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGcgcg < 2:3842447/100‑1 (MQ=255) atTCCGGTGGCCTTTGCGTTCTGTCTGAATGCGACCCGTCTTGGATTCTCTCCTCTCAAAAGA‑GA‑TTTTT‑TTCTCCTGGATTATTTATGCAgg > 1:12503/1‑93 (MQ=255) atTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGCTTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGc > 1:3878567/1‑100 (MQ=255) ttCCTGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGcc < 1:395005/100‑1 (MQ=255) ttCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGcc < 2:1286086/100‑1 (MQ=255) ctggtggtTTTTGCGTTGTGTTTGAATGTGATCCTTTTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTGATGCAGGCGCGAGCCAg < 1:2260065/98‑1 (MQ=255) ccGGTTGTCTTTGCGTTCGGTCTGAATGCTACCCGTCTGCGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAg < 2:3264788/100‑1 (MQ=255) ccGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATAATTTATGCAGGCGCGAGCCAg > 2:1509098/1‑100 (MQ=255) ccGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑‑TTTTTATTCTCCAGCATCATTTATGCAGCCGCGAACCAg > 2:943945/1‑100 (MQ=255) agCCTTTGCGTTCGGTCTGAATGCGAACCGTCTGGGATTATCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCACGCGCGAGCCAATTc > 2:3319501/2‑98 (MQ=255) ccTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCa > 2:404806/1‑100 (MQ=255) cTTTGCGTTCGGTCTGAATGCGACCTTTTTGGGATTTTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCa < 1:1508659/99‑1 (MQ=255) cTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCAt > 1:125433/1‑100 (MQ=255) gCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTAcc < 1:2960576/100‑1 (MQ=255) cGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcg > 2:2596648/1‑100 (MQ=255) cGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcg < 1:1424148/100‑1 (MQ=255) gtCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcgc < 2:2371262/98‑1 (MQ=255) ggTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTTCTTCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGa > 2:2021272/1‑98 (MQ=255) gTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGc < 2:3120312/100‑1 (MQ=255) gTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGACGCGAGCCAGTTCGTCATTACCGCGATGc > 1:653523/1‑100 (MQ=255) tGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTgg < 2:3199926/100‑1 (MQ=255) tGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTgg < 2:148780/100‑1 (MQ=255) tGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATACAGACGCGAGCAAGTTCGTAATAACTGCGATGCTgg > 1:1138201/1‑100 (MQ=255) tGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATAATTTATGCAAGCACGAGCCAGTTCGTCATTACCGCGATGCTgg > 1:2339995/1‑100 (MQ=255) gAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTTTTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTgg > 1:1998946/1‑100 (MQ=255) gAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGc < 2:1207534/100‑1 (MQ=255) aTGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCa > 1:426969/1‑99 (MQ=255) gCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGcc < 1:1022274/100‑1 (MQ=255) cGACCCGTCTTGGATTCTCTCCTCTTGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCg < 1:1704556/100‑1 (MQ=255) cGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCg > 1:3073837/1‑100 (MQ=255) cccGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCggg < 2:2710952/99‑1 (MQ=255) cccGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGa > 2:1184531/1‑100 (MQ=255) cccGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGa > 1:815176/1‑100 (MQ=255) cGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagt < 1:2057036/100‑1 (MQ=255) cGTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGag > 2:1025522/1‑99 (MQ=255) ttCTGGGATTCTCTCTTCTCGAAATC‑TT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagta < 1:754140/99‑1 (MQ=255) gTCTGGGATTCTCTCCTCTCGAGAGC‑GT‑TTTTT‑TTTTTTTTCATCATTTATGCAGGCGCGAGCCAGTTCTTCATTAGCGCGATACTCGCAGCCg > 2:2262724/1‑94 (MQ=255) gTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagta > 1:3256752/1‑100 (MQ=255) gTCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagta > 1:2869812/1‑100 (MQ=255) tCTGGGATTCTCTCCTCTCGAAAGCTT‑‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagt < 2:1889839/98‑1 (MQ=255) tCTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagtag < 2:1160471/100‑1 (MQ=255) cTGGGATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagtagt > 1:2530439/1‑100 (MQ=255) ngATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtg > 2:3307574/2‑100 (MQ=255) ggATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtg < 2:1394777/100‑1 (MQ=255) gATTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGCGCCAGTTCGACATTACCGCGATGCTGGCAGCCGGGAGAAGTTtgt > 1:1500518/1‑100 (MQ=255) aTTCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgtg < 2:2884072/100‑1 (MQ=255) ttCTCTCCTCTCGAAAGC‑GT‑TTTTT‑TTTTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTGATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTgg < 1:3235047/100‑1 (MQ=255) ttCTCCCCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgtg < 2:2087275/99‑1 (MQ=255) tctctcCTCTCGAAAGC‑GT‑TTTTT‑TTCTCCTGCTTCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGa < 1:1613683/100‑1 (MQ=255) actctcctctcGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTGTGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGa < 2:1620418/99‑1 (MQ=255) ctcctctcGAAAGC‑GT‑TTTTT‑TTATCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTCGCAGCCGGGAGCAGTATGTAGAtt > 2:3260024/1‑99 (MQ=255) cctctcGAAAGC‑GT‑TTTTT‑TTCTCCTTCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGCGTAGTTTGTGGATtgct > 2:2359431/1‑100 (MQ=255) ctctcGAAAGC‑GT‑TTTTT‑TTCTCCTGCATTTTTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctg < 1:2032762/100‑1 (MQ=255) ctctcGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctg < 2:1307634/100‑1 (MQ=255) ctctcGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCCATTCTGGCAGCCGGGAGTAGTTTGTGGATtgctg > 1:537971/1‑100 (MQ=255) ctcGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCa > 1:327183/1‑100 (MQ=255) tcGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCAc < 2:2958201/100‑1 (MQ=255) tcGAAAGC‑GT‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCAc < 2:6694/100‑1 (MQ=255) | GGATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑‑TTTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCAC > NC_000913/2809668‑2809857 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |