| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,459,293:1 | (G)5→6 | 100% | coding (955/1482 nt) | gspE → | general secretory pathway component, cryptic |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,459,288 | 1 | . | G | 91.0% | 493.4 / 42.6 | 156 | coding (950/1482 nt) | gspE | general secretory pathway component, cryptic |
| Reads supporting (aligned to +/- strand): ref base . (7/7); new base G (63/79); total (70/86) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.81e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 166 total aligned reads displayed.
GGAAGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GT‑GG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTGCA > NC_000913/3459190‑3459382 | ggAAGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAtg‑gt‑g < 1:2426247/100‑1 (MQ=255) aaGGCATTGGGCAAACGCAGGTGAATACCCGAGTGGATATGTATTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGAACCCGGATGTCGTCATG‑GT‑gg‑g > 2:264087/1‑100 (MQ=255) aGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GT‑gg‑gg > 2:2435394/1‑100 (MQ=255) aGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GT‑gg‑gg < 2:1176903/100‑1 (MQ=255) gCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GT‑gg‑gggg > 1:1564041/1‑99 (MQ=255) gCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCACGACCCGGATGTCGTCATG‑GT‑gg‑gggg < 1:2385744/100‑2 (MQ=255) cATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTAGCCAGGACCCGGATGTCGTCATG‑GT‑gg‑gggga > 1:807962/1‑98 (MQ=255) gggCAAACGCAGGTGAATACCCGTGTGGATATGTATTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GT‑GG‑GGG‑gaaa > 2:1528657/1‑97 (MQ=255) ggCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCACCAAGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTc > 1:745498/1‑100 (MQ=255) cAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGt < 1:875662/100‑1 (MQ=255) cAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGt < 1:2018410/100‑1 (MQ=255) aaaCGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTg < 1:3034146/100‑1 (MQ=255) aaaCGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTg < 1:3079002/100‑1 (MQ=255) aaaCGCAGGTGAATACCCGTGTGGATATGTCATTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTg < 2:3157669/100‑1 (MQ=255) aaaCGCAGGTGAATACCCGTGTGGATATGCCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTg < 2:2318129/100‑1 (MQ=255) aaCGCAGGTGAATTCCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGa < 2:3759424/100‑1 (MQ=255) aaCGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGa > 2:1738296/1‑100 (MQ=255) aaCGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGa < 2:38364/100‑1 (MQ=255) aCGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGAt < 1:1980929/100‑1 (MQ=255) aCGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGAt < 1:533009/100‑1 (MQ=255) gCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATAc < 2:1977761/100‑1 (MQ=255) ggTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGa > 2:721575/1‑100 (MQ=255) ggTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGa < 1:3049571/100‑1 (MQ=255) tGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGaaa > 2:2493647/1‑100 (MQ=255) gAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATTCTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAAc < 1:2965775/100‑1 (MQ=255) aaTACCCGTGTGGATATGTTTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGTACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATAc < 2:2972509/93‑1 (MQ=255) tACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGTACCCTGATGTCGTCATG‑GTGGG‑GGG‑AAAATCGTGATACAGAAACcgc > 1:1942717/1‑100 (MQ=255) tACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACcgc > 1:3887744/1‑100 (MQ=255) aCCCGTGTGGATATGTCTTTCGGTCGCGGCCTGCGTGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACcgcg < 1:3656896/100‑1 (MQ=255) cccGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACcgcg < 1:2727438/99‑1 (MQ=255) cccGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GA‑GGAGGG‑CAATTCGTGATACAGAAAc > 2:3712279/1‑95 (MQ=255) ccGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCa > 2:2658918/1‑100 (MQ=255) ccGTGTGGAGATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCgcgc < 2:3841699/99‑1 (MQ=255) tgGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTAGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTg > 1:1233821/1‑100 (MQ=255) ggATATGTCTTTCGCTCGCGGCGTGCGCGCCATAGTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTg > 2:3898609/1‑99 (MQ=255) ggATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGc < 2:591501/100‑1 (MQ=255) ggATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGc > 1:3684740/1‑100 (MQ=255) gATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GT‑GGAAGG‑AAATTCGAGATACAGAAACCGCGCAGATTGCg > 1:470094/1‑100 (MQ=255) gATATGTCTTTCACTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCATCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCg > 1:63820/1‑100 (MQ=255) atatGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCgg < 2:2822286/100‑1 (MQ=255) atatGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCgg < 2:2820630/100‑1 (MQ=255) tatGTCTTTCGCTCGGGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCgg < 2:3437345/99‑1 (MQ=255) tatGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAGCCGCGCAGATTGCgg < 2:1163057/99‑1 (MQ=255) tatGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCgg < 1:3561865/99‑1 (MQ=255) tatGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGt < 2:3197010/100‑1 (MQ=255) cTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAgg > 2:1680715/1‑100 (MQ=255) cTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAgg > 1:3220493/1‑100 (MQ=255) cTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAgg > 1:2203764/1‑100 (MQ=255) cTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAgg > 1:808900/1‑100 (MQ=255) cTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAgg < 1:2135048/100‑1 (MQ=255) tttCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGc > 1:397045/1‑100 (MQ=255) tttCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGc < 1:3341724/100‑1 (MQ=255) gctcgcGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGcn < 2:107784/97‑2 (MQ=255) ctcgcGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGc < 2:1915769/100‑1 (MQ=255) ctcgcGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGc > 1:12159/1‑100 (MQ=255) ctcgcGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGc > 1:2324356/1‑100 (MQ=255) ctcgcGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGc > 1:660038/1‑100 (MQ=255) ctcgcGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGc < 1:3270303/100‑1 (MQ=255) cgtggtcTGCGCGCTATACTTCGCCAGGAAGCGGATGTCGACATG‑GTGGG‑GGG‑AAAGTCGTGGACCATAAAACGCGACGATTGCGGTTCAg > 2:2690425/7‑91 (MQ=255) gcgGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCa < 1:1390634/100‑1 (MQ=255) ggCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCAcc > 1:3623041/1‑100 (MQ=255) ggCATGCGCGCCATACTTCGCCAGGACCCGGATTTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCAcc < 2:3802217/100‑1 (MQ=255) ccTGTGCGCCATACTTCGCCATGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCgg < 1:2681252/100‑1 (MQ=255) cTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGc > 2:2247117/1‑100 (MQ=255) cTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGc < 2:3333623/100‑1 (MQ=255) cgcgcCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCAt < 1:2957187/100‑1 (MQ=255) gcgcCATACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATc > 2:1312532/1‑100 (MQ=255) gcCATACTTCGCCAGAACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCGCGCTCACCg < 2:3754435/92‑1 (MQ=255) tACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTgg < 1:1419528/97‑1 (MQ=255) tACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTAc < 2:3684701/100‑1 (MQ=255) tACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTAc < 1:631834/100‑1 (MQ=255) tACTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGACCTCGCTCACCGGCCATCTGGTAc > 1:874169/1‑100 (MQ=255) cTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTActc > 1:1801001/1‑100 (MQ=255) cTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTActc > 1:3119601/1‑100 (MQ=255) cTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTAcag > 1:2606930/1‑98 (MQ=255) cTTCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGATCAGGCCTCGCTCACCGGCCATCTGGTActc > 1:1086277/1‑100 (MQ=255) ttCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTActct < 2:1766440/100‑1 (MQ=255) ttCGCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTACAGGCCTCGCTCACCGGCCATCTGGTActct < 2:552011/100‑1 (MQ=255) cGCCAGGACCCGGATGTCGTTATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCa < 1:3685930/100‑1 (MQ=255) gCCAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCACACAAATAGCAAATCAGGACTCGCTCACCGGCCATCTGGTACTCTCaa > 1:177384/1‑100 (MQ=255) ccAGGACCCGGATGTCGTCATGAAG‑GG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAac > 2:1800319/1‑100 (MQ=255) ccAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAac < 1:2927895/100‑1 (MQ=255) ccAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAac < 1:2542879/100‑1 (MQ=255) ccAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTACAGATAAGACCTCGCTCACCGGCCATCTGGTACTCTCAac > 1:2331898/1‑100 (MQ=255) cAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAaca < 2:2705285/100‑1 (MQ=255) cAGGACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATGGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAaca > 2:2183922/1‑100 (MQ=255) ggACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACt > 1:601900/1‑100 (MQ=255) ggACCCGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACt > 1:2089070/1‑100 (MQ=255) gACCCGGATGTCGTCATG‑GT‑GG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTcc < 2:2931611/100‑1 (MQ=255) cccGGCTGTCGTCTTT‑GTGGG‑GGG‑AAATTCGTGATACAGAAATCGGGCAGATTGCGGTTCAGGCCTCGCTCACCGTCCATCTTGTACTCTCAACACTCca > 2:640889/1‑100 (MQ=255) cccGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCca > 1:2749076/1‑100 (MQ=255) ccGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTTATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCcac < 1:1150478/100‑1 (MQ=255) ccGGATGTCGTCATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCcac < 1:1458364/100‑1 (MQ=255) gtcgtcATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAAc < 2:712492/100‑1 (MQ=255) cgtcATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCacac < 2:801171/94‑1 (MQ=255) cgtcATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAg < 2:3664143/100‑1 (MQ=255) cgtcATG‑GT‑GG‑GGGTAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAg < 1:577252/100‑1 (MQ=255) tcATG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTg > 2:2922826/1‑100 (MQ=255) aTG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTGc < 2:2475946/99‑1 (MQ=255) aTG‑GTGGG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTGCa < 2:1552901/100‑1 (MQ=255) | GGAAGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATG‑GT‑GG‑GGG‑AAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTGCA > NC_000913/3459190‑3459382 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |