| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,888,225:1 | +A | 15.3% | intergenic (+33/‑210) | mnmE → / → tnaC | tRNA U34 5‑methylaminomethyl‑2‑thiouridine modification GTPase/tryptophanase leader peptide |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,888,224 | 1 | . | A | 15.3% | 644.8 / 125.3 | 196 | intergenic (+32/‑211) | mnmE/tnaC | tRNA U34 5‑methylaminomethyl‑2‑thiouridine modification GTPase/tryptophanase leader peptide |
| Reads supporting (aligned to +/- strand): ref base . (77/89); new base A (14/16); total (91/105) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.20e-01 | |||||||||||
Only 100 of 201 total aligned reads displayed.
TCACCGGGGAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAGCATTT > NC_000913/3888125‑3888323 | cACCGGGGAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑a > 2:3847167/1‑100 (MQ=255) ccGGGGAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATg > 2:101026/1‑100 (MQ=255) cGGGGAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGc > 1:1769963/1‑100 (MQ=255) gggAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCgg < 2:3616880/100‑1 (MQ=255) gggAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TCTGACAGTCAGAATGCgg < 1:3068317/100‑1 (MQ=38) gggAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TCTGACAGTCAGAATGCgg < 1:2233479/100‑1 (MQ=38) ggAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TCTGACAGTCAGAATGCGgc < 2:2186982/100‑1 (MQ=38) gAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCg < 2:3187545/97‑1 (MQ=255) aaTTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TCTGACAGTCAGAATGCGgctt < 1:664733/100‑1 (MQ=38) aaTTTACTTCAGACGACCTGCTGGGGCGGATTTGCTCCAGCTTCTGTATGGGTAAGTAACCGCGCTTCCGAAGCCGCA‑TCTGACAGTCAGAATGCGgctt < 2:234624/100‑1 (MQ=25) aaTTCACTTCAGACGATCTGCTGGGGCGAATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAATCCGCA‑TCTGACAGTCAGAATGCGgc < 2:539371/98‑1 (MQ=37) aTTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGgcttc < 2:1504206/100‑1 (MQ=255) tttACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGTTTCTGTATTGGTAAGTAACCGCGCTGACGAAGCCGCATTCTGACTGTCAG‑AGGCGgcttc < 1:1695846/99‑1 (MQ=255) tttACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGgcttcg < 2:1902161/100‑1 (MQ=255) tttACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TCTGACAGTCAGAATGCGgcttcg < 1:1733407/100‑1 (MQ=38) tACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGgcttcgct < 1:2931536/100‑1 (MQ=255) cTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGgcttcgcttc > 2:1803406/1‑100 (MQ=255) cTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGgcttcgcttc > 1:3576141/1‑100 (MQ=255) cTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATACGgcttcgcttc > 1:1940006/1‑100 (MQ=255) ttCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCa < 1:2115837/100‑1 (MQ=255) ttCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCa < 2:619356/100‑1 (MQ=255) ttCAGACGACCTGCTGGGGCGGAATTTCTCCAGCTTCTGTATTGGTAAGTAACCGAGCTTACGAAGCCGCATGCTGACTGTCAG‑ATGCGGCTTCGCTTCa > 2:3141351/1‑100 (MQ=255) cAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCAtt > 1:3241626/1‑100 (MQ=255) gacgacCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGt < 1:3353644/100‑1 (MQ=255) cgacCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTa < 2:1114733/100‑1 (MQ=255) gacCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTAc < 2:1219294/100‑1 (MQ=255) acCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTAcc < 2:1936544/100‑1 (MQ=255) ccTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTAcc < 1:2901863/99‑1 (MQ=255) ccTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCa > 1:1898834/1‑100 (MQ=255) ccTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCa > 2:1786050/1‑100 (MQ=255) ccTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCa > 1:2283822/1‑100 (MQ=255) ccTGCTGGGGCGGATTTTCTCCAGCTGCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCa > 1:2387595/1‑100 (MQ=255) gctgGGGCGGATTTTCTCCAGCTTCTGTATAGGAAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATAGTTACCACTc > 2:2564974/1‑100 (MQ=255) ggggCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTg > 2:1942290/1‑100 (MQ=255) gggCGGATTTTCTCCAGTTTTTGTATTGGTAAGTAACCGCGTTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGt < 1:2618380/100‑1 (MQ=255) gCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTa > 2:336056/1‑100 (MQ=255) cGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTAt > 2:3812627/1‑100 (MQ=255) cGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTAt > 2:482638/1‑100 (MQ=255) cGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTAt > 1:623541/1‑100 (MQ=255) cGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTAt > 2:2773764/1‑100 (MQ=255) gATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTc < 2:825071/100‑1 (MQ=255) ttCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCa < 2:2155098/100‑1 (MQ=255) tctcCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCaa < 2:3376153/100‑1 (MQ=255) ctcCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCaag > 1:1843645/1‑99 (MQ=255) ctcCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAAc < 1:2809632/100‑1 (MQ=255) tcCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAAcc > 1:449801/1‑100 (MQ=255) tcCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAAcc < 2:835839/100‑1 (MQ=255) catcTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCTCTCCTGTTATTCCTCAAc < 2:1332129/94‑1 (MQ=255) cTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCttt < 1:3441037/99‑1 (MQ=255) tCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCttt‑ttt < 1:1268367/100‑1 (MQ=255) tCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCttt‑ttt < 2:3741883/100‑1 (MQ=255) tGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTAAG‑ATGCGGATTCGCTTCATAGTTAACAATCCTGTTATTCCTCAACCCTTT‑TTTTa > 1:3679861/1‑100 (MQ=255) aTTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCTG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAAc < 2:2742269/100‑1 (MQ=255) aTTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAAc > 1:1577788/1‑100 (MQ=255) tGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACAt < 2:3550521/100‑1 (MQ=255) ggTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACAtt > 2:1738988/1‑100 (MQ=255) taagtaaCCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTaa > 2:704327/1‑100 (MQ=255) agtaaCCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTaaaa > 2:2442872/1‑100 (MQ=255) agtaaCCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACAACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTaaaa > 1:1165266/1‑100 (MQ=255) gtaaCCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAAt < 2:2338883/100‑1 (MQ=255) taaCCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTAAACCCTTT‑TTTTAAACATTAAAAtt > 1:1058170/1‑100 (MQ=255) taaCCGCGCTTACGAAGCCACATTCTGACAGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAAtt > 2:907382/1‑100 (MQ=255) aaCCGTGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAATTc < 1:856117/100‑1 (MQ=255) gcgcTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAATTCTTAc < 2:2943804/100‑1 (MQ=255) cgcTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAATTCTTACg < 1:545610/100‑1 (MQ=255) cTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAATTCTTACGTa > 1:754826/1‑100 (MQ=255) aagcGAAGCCGCA‑TCTGACAGTCAGAATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAATTCTTACGTaa > 1:2444461/4‑100 (MQ=37) tACGAAGCCGCATTCTGACTGTCAG‑ATGCGTCTTTGCTTCATTGTTTCCATTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAATTCTTACGTAAt < 1:1219044/100‑1 (MQ=255) tACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAATTCTTACGTAAt > 1:3755482/1‑100 (MQ=255) tACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAATTCTTACGTAAt > 2:609427/1‑100 (MQ=255) tACGAAGCCGCATTCTGACTGTAAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTATTTTAAACATTAAAATTCTTACGTa > 2:3008303/1‑99 (MQ=255) aCGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTTCTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAATTCTTACGTAAtt < 1:52329/100‑1 (MQ=255) cGAAGCCGCA‑TCTGACAGTCAGAATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAATTCTTACGTAAttt > 1:569808/1‑100 (MQ=37) gAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAATTCTTACGTAATTta > 1:800505/1‑100 (MQ=255) gAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAATTCTTACGTAATTta < 1:2884521/100‑1 (MQ=255) gAAGCCGCA‑TCTGACAGTCAGAATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAATTCTTACGTAATTta > 2:2203782/1‑100 (MQ=38) gAAGCCGCA‑TCTGACAGTCAGAATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAATTCTTACGTAATTta > 1:1467840/1‑100 (MQ=38) gAAGCCGCA‑TCTGACAGTCAGAATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCATTT‑TTTTAAACATTAAAATTCTTACGTAATTta > 1:1250690/1‑100 (MQ=37) gAAGCCGCA‑TCTGACAGTCAGAATGCGGCTTCGCTTCATTGTTACCACTACTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAATTCTTACGTAATTta > 1:1089561/1‑100 (MQ=37) gCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAATTCTTACGTAATTTATaa > 2:3636169/1‑100 (MQ=255) gCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAATTCTTACGTAATTTATaa < 1:3509999/100‑1 (MQ=255) gCCGCA‑TCTGACAGTCAGAATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAATTCTTACGTAATTTATaa > 1:3333425/1‑100 (MQ=38) ccGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAATTCTTTCGTAATTTATAAt < 2:2422977/100‑1 (MQ=255) ccGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAATTCTTACGTAATTTATaa > 1:3877057/1‑99 (MQ=255) ccGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAATTCTTACGTAATTTATAAt > 2:1607871/1‑100 (MQ=255) cGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAATTCTTACGTAATTTATAATc > 1:2831057/1‑100 (MQ=255) aTTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAATTCTTACGTAATTTATAATCttt < 2:3755443/100‑1 (MQ=255) aTTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAATTCTTACGTAATTTATAATCttt < 1:1977625/100‑1 (MQ=255) aTTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAATTCTTACGTAATTTATAATCttt < 2:1118515/100‑1 (MQ=255) ttCTGACTGTCAG‑ATGCGGCTTTGCTTCATTGTTACTTCTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTa < 1:2505299/100‑1 (MQ=255) cTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTaaa > 2:1555363/1‑100 (MQ=255) cTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTaaa > 2:181877/1‑100 (MQ=255) cTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTaaaaaaa < 2:1866467/100‑1 (MQ=255) cTGTCAG‑ATGCGACTTCGCTTCATTGTTACCACACCTATTATTCCTCAACCCTTT‑TTTTAAACATTAAAATTCTTAGGTAATTTATAATCTTTaaaaaaa > 2:2588184/1‑100 (MQ=255) tGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCATCCCTTT‑TTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAg < 1:2153585/100‑1 (MQ=255) tGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAg < 2:2913161/100‑1 (MQ=255) tGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAg < 1:1325330/100‑1 (MQ=255) gTCAG‑ATGCGGCTTCGCTTCATTGTTACGAATCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAg < 2:2313643/99‑1 (MQ=255) tCAG‑ATGCGGCTTCGATTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAATTCTTACGTAATTTATAATATTTAAAAAAAGCa < 2:383232/100‑1 (MQ=255) g‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAGCAttt > 1:3912599/1‑100 (MQ=255) | TCACCGGGGAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTCTGACTGTCAG‑ATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTT‑TTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAGCATTT > NC_000913/3888125‑3888323 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |