| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,951,598:1 | +T | 100% | pseudogene (57/663 nt) | ilvG → | pseudogene, acetolactate synthase 2 large subunit, valine‑insensitive; acetolactate synthase II, large subunit, cryptic, interrupted |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,951,597 | 1 | . | T | 97.5% | 501.2 / 4.6 | 158 | pseudogene (56/663 nt) | ilvG | pseudogene, acetolactate synthase 2 large subunit, valine‑insensitive; acetolactate synthase II, large subunit, cryptic, interrupted |
| Reads supporting (aligned to +/- strand): ref base . (0/4); new base T (76/78); total (76/82) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.21e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 166 total aligned reads displayed.
TTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCA‑T‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCAC > NC_000913/3951498‑3951691 | ttAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCA‑t > 1:309693/1‑100 (MQ=255) ttAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGACGTTACGACCA‑t > 1:1903803/1‑100 (MQ=255) aaaTGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCA‑ttc > 2:2004246/1‑98 (MQ=255) ctctGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGt > 2:2941367/1‑100 (MQ=255) ctctGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGt < 1:1964659/100‑1 (MQ=255) tctGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTg < 1:3092206/100‑1 (MQ=255) tctGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTg < 1:2318448/100‑1 (MQ=255) ctGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGa > 1:3073663/1‑100 (MQ=255) tGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGAc < 1:2561457/100‑1 (MQ=255) tGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGAc > 1:2340596/1‑100 (MQ=255) gTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACg < 2:443528/100‑1 (MQ=255) gTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACg > 2:1752582/1‑100 (MQ=255) gTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCACCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACg > 2:909260/1‑100 (MQ=255) tACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATCAACATTCATGGCGTTACGACCATT‑CCCGGTGACGCt > 2:1748649/1‑100 (MQ=255) aCCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTa > 1:3248898/1‑100 (MQ=255) ccAGCATTACAGCAGCCGTTAAATCAATGCCTGGCAGCAACACTGCGCGCAGCTGCGTGATAAACATTCCTAGCGTTACGACCATT‑CCCGGTGACGCTAt > 1:3530235/1‑100 (MQ=255) ccAGCATTACAGCAGCCGTTAAATCAATGACTGGCCGCAACACTGCGCGCAGCTGCGTGATTAACATTCCTGGCGATAAGACCATT‑CCCGGTGACGCTAt > 1:1815421/1‑100 (MQ=255) aGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCt > 1:2603609/1‑100 (MQ=255) aGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCt > 1:338443/1‑100 (MQ=255) gCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTa < 1:293721/100‑1 (MQ=255) gCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTa > 1:1044697/1‑100 (MQ=255) aTTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTAcg > 2:3302710/1‑100 (MQ=255) aTTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTAcg > 2:3921472/1‑100 (MQ=255) tACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCTGGTGACGCTATCTAcgcg < 2:1159779/100‑1 (MQ=255) aCAGTAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACgcgc < 2:2478255/100‑1 (MQ=255) aCAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGCTGAAAATTCATGGCGTTACGACCATT‑ACCGGTGACGATATCTACgcgc > 1:2275820/1‑100 (MQ=255) aCAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACgcgc > 1:3186861/1‑100 (MQ=255) cagcagCCGGTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGcc > 2:3495512/1‑100 (MQ=255) agcagcCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑TCCGGTGACGCTATCTACGCGCCg > 1:531706/1‑100 (MQ=255) gcagcCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCgt < 2:253826/100‑1 (MQ=255) gcagcCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCgt > 1:1206473/1‑100 (MQ=255) gcagcCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCgt > 2:347380/1‑100 (MQ=255) ccGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCgttgtt > 2:2707392/1‑100 (MQ=255) ccGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCgttgtt > 1:1367975/1‑100 (MQ=255) cGTTATATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCgttgt < 2:2257930/98‑1 (MQ=255) cGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCgttgttt > 1:366170/1‑99 (MQ=255) cGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCgttgttg > 1:2013412/1‑100 (MQ=255) gTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCgttgttgt < 1:2777062/100‑1 (MQ=255) gTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCgttgttgt < 2:1068749/100‑1 (MQ=255) gTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCgttgttgt < 1:3286532/100‑1 (MQ=255) gTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCgttgttgt < 2:2197246/100‑1 (MQ=255) gTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCgttgttgt < 1:1586643/100‑1 (MQ=255) gTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCgttgttgt > 1:3775024/1‑100 (MQ=255) gTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCGACGCGCCgttgttgt > 1:3866943/1‑100 (MQ=255) aaaTCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTaa < 2:1960896/100‑1 (MQ=255) aaTCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTaa‑a > 2:1717821/1‑100 (MQ=255) aaTGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑aacaa > 2:2333649/1‑100 (MQ=255) aaTGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑aacaa < 1:2863253/100‑1 (MQ=255) aaTGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑aacaa < 1:2060962/100‑1 (MQ=255) aTGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑aacaac < 2:2084550/100‑1 (MQ=255) tGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑aacaacn < 2:3201335/100‑2 (MQ=255) tGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑aacaac > 2:86947/1‑99 (MQ=255) gACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTg < 1:3317136/100‑1 (MQ=255) gACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTAACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTg > 1:1499285/1‑100 (MQ=255) aCTGGCAGCAACACTGCGCGCAGCTGCGTGAGGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTg < 2:1598414/99‑1 (MQ=255) cTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTc > 1:943977/1‑100 (MQ=255) tGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCg < 1:3262075/100‑1 (MQ=255) ggCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCACCATTGTTGTTAA‑AACAACTGTCgg > 1:3024132/1‑100 (MQ=255) gcagcaACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGa < 2:2369013/100‑1 (MQ=255) cagcaACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTT‑TTaacaacaacggcgcgta < 2:894623/100‑9 (MQ=255) gcaACACTGCGCGCAGCTGCGTGATTAACATTCCTGGCGATACGACCATT‑CCCGCTGACGCCATCTACGCGCCTTTGTTGTTAA‑AACAACtctc > 2:1044161/1‑94 (MQ=255) gcaACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCg > 2:238942/1‑100 (MQ=255) gcaACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCg > 1:2626806/1‑100 (MQ=255) caACACTTCGCGCAGCTGCGTGATGAACACTCCTTGCGTTACAACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCg < 1:634598/99‑1 (MQ=255) caACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGt < 2:749548/100‑1 (MQ=255) acacTGCTCGAAGCTGCGTGATGAAAATTCCTGGCAGTGCGAAAATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTaa < 2:362147/100‑1 (MQ=255) cTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAAcc > 1:3587886/1‑100 (MQ=255) tGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCt < 1:2941393/100‑1 (MQ=255) cgcAGCTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCgg < 1:3188787/100‑1 (MQ=255) gtaGCTGCGTGATGAACATTCTTGGCGTTATGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCgg < 1:2589243/97‑1 (MQ=255) gcAGCTGCGTGATGAACAGTCCTGGGGTTAGGACCA‑TGCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGa < 2:3744359/100‑1 (MQ=255) cTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGc > 2:3125838/1‑100 (MQ=255) cTGCGTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGc < 2:3786909/100‑1 (MQ=255) gTGATGAACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGcgtcg < 1:1794041/100‑1 (MQ=255) gatgaACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTg < 1:488553/100‑1 (MQ=255) gatgaACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCCTAAACCTGCGGATTGCGTCGTg < 2:2268149/100‑1 (MQ=255) gatgaACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCAACGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGcgt > 2:3439114/1‑96 (MQ=255) tgaACATTCCTGGCGTTACGACCATT‑CCCGGTGACACTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGAc > 2:3037781/1‑100 (MQ=255) gaACATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGAcc < 1:1752597/100‑1 (MQ=255) aCATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGCTCGTAAACCTGCGGATTGCGTCGTGACcac > 2:1349333/1‑100 (MQ=255) aCATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACAGTCGGATCGTAAACCTGCGGATTGCGTCGTGACcac > 1:887676/1‑100 (MQ=255) cATTCCTTGCGTTACGACCATT‑CCCGGTGACGCGATCTACGCGCCGTTGTTGGTAA‑AACCACTGTCGGATCGTAAACCTGCCGATTGCGTCGTGACcac < 1:1346715/99‑1 (MQ=255) cATTCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACcaca > 2:3669614/1‑100 (MQ=255) aTTCCTGGCGTTACGACCA‑T‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGa < 1:1032828/100‑1 (MQ=255) ttCCTGGCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACcac > 2:1543188/1‑97 (MQ=255) ggCGTTACGACCATT‑CCCGGTGACGCTATCTACTCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTgg < 1:3614904/100‑1 (MQ=255) ggCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCCTGACCACAGATGTgg > 2:3851643/1‑100 (MQ=255) gCGTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTggg < 1:2815826/100‑1 (MQ=255) gTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGgc < 2:2775728/100‑1 (MQ=255) gTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGgc < 2:764720/100‑1 (MQ=255) gTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGgc > 1:377932/1‑100 (MQ=255) gTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGgc > 2:605301/1‑100 (MQ=255) gTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGgc < 2:3626539/100‑1 (MQ=255) gTTACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGgc < 1:1909616/100‑1 (MQ=255) ttACGACTATT‑CCCGGTGACTCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGGCCACAGATGTGGGgca < 1:3672065/100‑1 (MQ=255) ttACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGgca > 1:403111/1‑100 (MQ=255) ttACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGgca < 1:412204/100‑1 (MQ=255) ttACGACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGgca < 2:2929667/100‑1 (MQ=255) tACGACCATT‑CCCAGCGACGGTATCTACGGCCCGTTGTTGTTAA‑AACAACTATCTGATCGTAAACCTGCGGATTCCGTCGTGTCCACAGATGTggggt < 2:962508/98‑2 (MQ=255) gACCATT‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCAc > 1:1429466/1‑100 (MQ=255) | TTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCA‑T‑CCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCAC > NC_000913/3951498‑3951691 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |