| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,652,855:1 | (G)6→7 | 100% | coding (362/846 nt) | sseA → | 3‑mercaptopyruvate sulfurtransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,652,849 | 1 | . | G | 91.5% | 411.8 / 31.8 | 129 | coding (356/846 nt) | sseA | 3‑mercaptopyruvate sulfurtransferase |
| Reads supporting (aligned to +/- strand): ref base . (7/4); new base G (47/70); total (55/74) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.01e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 149 total aligned reads displayed.
GGATAAGCACCTGATTGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑T‑G‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAGGAGAGTTTAACGCCGCGTTTAAT > NC_000913/2652751‑2652943 | ggATAAGCACCTGATTGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑T‑g > 1:1552059/1‑100 (MQ=255) tAAGCACCTGATTGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCAGGGTGCATGCTGGGCGCCTTTGGTGTCGAGAAAGTGTC‑GATTC‑T‑g‑g > 2:2745557/1‑98 (MQ=255) aaGCACCTGATTGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑T‑g‑g‑gga < 1:1207111/100‑2 (MQ=255) aaGCACCTGATTGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑T‑g‑g‑gg‑g < 2:3661036/100‑1 (MQ=255) gCACCTGATTGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑T‑g‑g‑ggagg > 1:3226861/1‑97 (MQ=255) gCACCTGATTGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGATGTAGAGAAAGTGTC‑GATTC‑T‑g‑g‑gg‑ggg > 1:3429082/1‑99 (MQ=255) cACCTGATTGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑T‑g‑g‑gg‑gggt < 2:2108155/100‑3 (MQ=255) cACCTGATTGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑T‑g‑g‑gg‑gggt > 2:3340501/1‑98 (MQ=255) aCCTGATTGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑T‑g‑g‑ggagatc > 2:3735316/1‑95 (MQ=255) ccTGATTGTCTATGACGATGGTAATCTTTTCTAAGCCCCACGTGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑T‑g‑g‑gg‑gggtgg < 1:574959/100‑5 (MQ=255) ccTGATTGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑T‑g‑g‑gg‑gggtgg < 2:466954/100‑5 (MQ=255) ccTGATTGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑T‑g‑g‑gg‑gggtgg > 2:908502/1‑96 (MQ=255) ccTGATTGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑T‑g‑g‑gg‑gggtgg > 1:1178518/1‑96 (MQ=255) ccTGATTGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGAACACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑T‑g‑g‑gg‑gggtgg > 1:267788/1‑96 (MQ=255) cTGATTGTCTATGACGAAGGTAATCCTTTCTCAGCCCCACGACCATGGTGGATGCTGCGCACCTTTGGTGTAGAGACAGTGTC‑GCTTC‑T‑g‑g‑gg‑gggtg > 2:601506/1‑95 (MQ=255) tGATTGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTG‑GATTC‑T‑t‑g‑gg > 2:1658376/1‑92 (MQ=255) tGATTGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑TATTC‑TGG‑G‑GG‑GG‑TGGAc > 2:1143030/1‑100 (MQ=255) tGATTGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGAc < 2:3481774/100‑1 (MQ=255) gATTGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACt < 1:2204928/100‑1 (MQ=255) gATTGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACt > 1:2646693/1‑100 (MQ=255) gATTGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACt > 2:159931/1‑100 (MQ=255) ttGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTg < 2:1976750/100‑1 (MQ=255) tCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAg < 1:2856610/100‑1 (MQ=255) cTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAgg > 2:2760431/1‑100 (MQ=255) cTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGAAACTTTGATGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAgg > 1:276991/1‑100 (MQ=255) tATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGTTGGATGCTGCGCACCTTCGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGc < 1:3081979/100‑1 (MQ=255) tATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGc > 1:3808268/1‑100 (MQ=255) tATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGc < 2:2063488/100‑1 (MQ=255) tATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGc < 1:3411921/100‑1 (MQ=255) tATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑T‑G‑GTGG‑GG‑TGGACTTGCAGGc < 2:616970/100‑1 (MQ=255) tGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTg < 2:3081658/100‑1 (MQ=255) tGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTg < 2:2582365/100‑1 (MQ=255) tGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTg < 2:2605601/100‑1 (MQ=255) gACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTgg < 2:2932904/100‑1 (MQ=255) gACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTgg < 1:140550/100‑1 (MQ=255) aCGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGc < 2:1057450/100‑1 (MQ=255) cGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCa < 2:1822195/100‑1 (MQ=255) cGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTA‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCa > 1:618169/1‑100 (MQ=255) aGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAgcg < 1:1884517/100‑1 (MQ=255) aGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAgcg < 1:1004557/100‑1 (MQ=255) ggTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAgcgc < 1:324447/100‑1 (MQ=255) ggTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAgcgc < 2:3625090/100‑1 (MQ=255) gcaaTCTTTGCTCAGCCGCACGAGCATGGTGGATGCTGCGCACCTGTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGcgcg < 2:3728803/98‑1 (MQ=255) tAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGACAAATAA‑G‑G‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCga > 1:1221832/1‑100 (MQ=255) tAATCTTTTCTCAGCCACACGAGCATGGTGGATGCTGCGCACGTTTGGTGTAAAGAAAGTGTG‑GAGTC‑TGG‑G‑GG‑GG‑AGGACTTGCATGCTGGCAgcg > 2:3413644/1‑97 (MQ=255) aaTCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCgat > 2:2375158/1‑100 (MQ=255) aaTCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCgat > 1:1093938/1‑100 (MQ=255) aaTCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCgat < 1:3653606/100‑1 (MQ=255) aTCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCgatg < 2:688183/100‑1 (MQ=255) aTCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCATTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCgatg < 2:2458365/100‑1 (MQ=255) tCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCgatga > 1:938887/1‑100 (MQ=255) tCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCgatga > 1:3875189/1‑100 (MQ=255) ttCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATctg < 1:3780389/100‑1 (MQ=255) tctcAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATctgc < 1:436984/100‑1 (MQ=255) ctcAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTCTAGAGAAAGTGTC‑GAATA‑TAA‑G‑GG‑AA‑TGGACTAGCAGGCTGGCAGCGCGATGATctgct > 1:444739/1‑100 (MQ=255) aGCCCCACTAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGtt < 1:656347/100‑1 (MQ=255) aGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGtt < 1:159936/100‑1 (MQ=255) aGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGtt < 1:3007484/100‑1 (MQ=255) cccACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTaga < 1:3814971/100‑1 (MQ=255) cccACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTaga > 2:2494550/1‑100 (MQ=255) ccACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTagaa < 1:812889/100‑1 (MQ=255) ccACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTagaa < 2:3359779/100‑1 (MQ=255) ccACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTaga < 2:1957792/99‑1 (MQ=255) cGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAgaagaa > 2:121030/1‑100 (MQ=255) cGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAgaagaa > 1:1544722/1‑100 (MQ=255) aGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAgg < 2:396352/100‑1 (MQ=255) gCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCAGACAGCACGAAGAACTGCTATTAGAAGAAGGt > 1:1444297/1‑100 (MQ=255) tggtggATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑T‑G‑G‑GGAGG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCa > 2:2034310/1‑100 (MQ=255) ggtggATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAg > 1:1487043/1‑100 (MQ=255) gtggATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGt < 1:1739498/100‑1 (MQ=255) tggATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTa < 1:2001043/100‑1 (MQ=255) ggATTCTGCGCACCTTTTGTGTAGTGAAAGCGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTag < 1:243766/100‑1 (MQ=255) gATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑T‑G‑GAGG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTaga < 2:233417/100‑1 (MQ=255) tgctgcGCACCTTTGGTGTAGAGAAATATTC‑GTTTCTT‑T‑G‑GG‑GC‑TGGACGTGCAGGTTGGCAGCGTGATGATCTTCTTTTATAAGATGGTGCAGTAGAGc < 2:293067/100‑1 (MQ=255) tgctgcGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGc > 1:3044588/1‑100 (MQ=255) ctgcGCACCTTTGGTGTAGAGAAAGAGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCAGATAGAAGAAGGAGCAGTaga > 2:2861242/1‑96 (MQ=255) tgcGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGc > 2:942459/1‑100 (MQ=255) gcgtACCTTTTTTGTAGAGATAGTGTC‑GATTC‑T‑GTT‑TG‑GG‑GAGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGcc < 1:2276162/100‑1 (MQ=255) gcACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCgg < 2:3449299/100‑1 (MQ=255) gcACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCgg > 1:1945783/1‑100 (MQ=255) cACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGa < 1:1189984/100‑1 (MQ=255) cTTTGGTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAgg > 1:2490258/1‑100 (MQ=255) ggTGTAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAGGagag > 1:3170725/1‑100 (MQ=255) ggTGTAGAGAAAGTGGC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAGGagag < 2:3022646/100‑1 (MQ=255) gtgtAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAGGAGAGt > 1:562917/1‑100 (MQ=255) tgtAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAGGAGAGtt < 2:749887/100‑1 (MQ=255) gtAGAGAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAGGAGAGttt < 1:3685817/100‑1 (MQ=255) agagAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAGGAGAGTTTaa > 2:1999300/1‑100 (MQ=255) agagAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGGAGAGCTGCCGGAAGGACACTTTaa > 2:3017162/1‑100 (MQ=255) agagAAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGAATTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCCGAAGgaga > 2:3110966/1‑94 (MQ=255) agagAAAGTGTC‑GATTC‑T‑G‑G‑GG‑GGATGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGGAGAAGGTGCAGTAGAGCTGCCGGAAGGAGAGTTTaa > 2:1149899/1‑100 (MQ=255) gagaAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAGGAGAGTTTAAc > 1:112348/1‑100 (MQ=255) gagaAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAGGAGAGTTTAAc < 2:1301369/100‑1 (MQ=255) gagaAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAGGAGAGTTTAAc > 2:3338684/1‑100 (MQ=255) agaAAGTGTC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAGGAGAGTTTAAcg < 2:3836821/100‑1 (MQ=255) aaaGTGTC‑GAGTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAGGAGAGTTTAAcgc < 1:957479/99‑1 (MQ=255) aGTGTC‑GATTC‑T‑G‑GTGG‑GG‑TGGACTTGCAGGCTGGCAGAGCGATGATCTGCTGTTAGAAGAAGTTGCAGTAGAGCTGCCGGAAGGAGAGGTTAAcgc > 2:2072469/1‑97 (MQ=255) gtC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAGGAGAGTTTAACGCCGCGtt > 2:1330288/1‑100 (MQ=255) tC‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAGGAGAGTTTAACGCCGCGttt < 2:2914093/100‑1 (MQ=255) c‑GATTC‑TGG‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAGGAGAGTTTAACGCCGCGTTTa < 2:430565/100‑1 (MQ=255) | GGATAAGCACCTGATTGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTC‑GATTC‑T‑G‑G‑GG‑GG‑TGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAGGAGAGTTTAACGCCGCGTTTAAT > NC_000913/2652751‑2652943 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |