| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3060658 | NA (NA) | 14 (0.100) | 8/174 | NT | NA | intergenic (+12/‑192) | argP/scpA | transcriptional regulator for arginine transport and DNA replication genes; replication initiation inhibitor/methylmalonyl‑CoA mutase |
| ? | NC_000913 | = 3060681 | NA (NA) | intergenic (+35/‑169) | argP/scpA | transcriptional regulator for arginine transport and DNA replication genes; replication initiation inhibitor/methylmalonyl‑CoA mutase | |||||
GGCACCGCTTTGCTCCTGAAAGCCGCATGATGCGTAAAGTCACTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3060558‑3060658‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaCGCCTGATATGTGCTATCAGGCATTATTTGATG < NC_000913/3060681‑3060649 GGCACCGCTTTGCTCCTGAAAGCCGCATGATGCGTAAAGTCACTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATA > 2:1293101/1‑100GGCACCGCTTTGCTCCTGAAAGCCGCATGATGCGTAAAGTCACTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATA > 1:2185009/1‑100 GCACCGCTTTGCTCCTGAAAGCCGCATGATGCGTAAAGTCACTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAA > 1:982470/1‑100 GAAAGCCGCATGATGCGTAAAGTCACTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATATGTGCTA < 1:1126553/100‑1 CGCATGATGCGTAAAGTCACTGATGTGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATATGTGCTATCAGGC < 1:1258035/100‑1 ATGATGCGTAAAGTCATTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATATGTGCTATCAGGCATT < 1:748683/100‑1 ATGATGCGTAAAGTCACTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATATGTGCTATCAGGCATT < 2:717611/100‑1 ATGATGCGTAAAGTCACTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATATGTGCTATCAGGCATT < 2:3496622/100‑1 ATGATGCGTAAAGTCACTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATATGTGCTATCAGGCAT < 1:3846877/99‑1 TGATGCGTAAAGTCACTGATGCGTTACTCGATTATGGTCACAAAGTCCTACGTCAGGATTAATCCATCAAATAATGCCTGATATGTGCTATCAGGCATT < 2:3463844/99‑1 GATGCGTAAAGTCACTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATATGTGCTATCAGGCATTAT < 1:1677079/100‑1 TGCTTAAAGTTACTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATATGTGCTATCAGGCATTATTT < 1:1493650/100‑1 TGCGTAAAGTCACTGATGCGTTACTTGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAACGCCTGATATGTGCTATCAGGCATTATTT < 1:166074/100‑1 TGCGTAAAGTCACTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATATGTGCTATCAGGCATTATTT < 1:3536032/100‑1 GTAAAGTCACTGATGCGTTACTCGATTATGGTTACAAATTCCTTCGTCAGGATTAATCCATCAAATAACGCCTGATATGTGCTATCAGGCATTATTTGAT < 1:1445028/100‑1 TAAATTCACTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATTCCTGATATGTGCTATCAGGCATTATTTGAT < 2:1261851/99‑1 TAAAGTCACTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAACGCCTGATATGTGCTATCAGGCATTATTTGATG < 1:1781976/100‑1 GGCACCGCTTTGCTCCTGAAAGCCGCATGATGCGTAAAGTCACTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3060558‑3060658‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaCGCCTGATATGTGCTATCAGGCATTATTTGATG < NC_000913/3060681‑3060649 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |