| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4625174 = | 161 (1.150) | 10 (0.080) | 8/166 | NT | 6.3% | coding (280/969 nt) | serB | 3‑phosphoserine phosphatase |
| ? | NC_000913 | 4625219 = | 148 (1.140) | coding (325/969 nt) | serB | 3‑phosphoserine phosphatase | |||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
ATCAATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAG‑‑‑CTGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4625278‑4625174‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcgcACGCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCAGATTGAATGTATTGATGAAATTGCCAAACTGGCCGGAACGGGCGAGATGGTGGCG > NC_000913/4625219‑4625317 ATCAATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGCCGACATCCAG‑‑‑C > 2:1774309/1‑100 TCAATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAG‑‑‑CT < 2:1353206/100‑1 TCAATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAG‑‑‑CT > 2:620158/1‑100 TCAATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTACGGGATTTTCCCCAACGGGGCGACATCCAG‑‑‑CT > 1:634283/1‑100 CAATACATTCAATCTGGATGGCGGTGGTGTCCTTAGCCATCACCAGCATACCCGGCGTGCGCAGTTGCGGGATTTTCCCCAGCGGGGCGACATCCAG‑‑‑C < 2:2360957/98‑1 CAATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCACACCCGGCGTGCGCAGGTTCGGGATTTTCCCCTGCGGGGCGACATCCAG‑‑‑CTG < 2:965269/100‑1 CAATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGTGATTTTCCCCAGCGGGGCGACATCCAG‑‑‑CTG < 2:965338/100‑1 CAATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAG‑‑‑CTG > 2:2488250/1‑100 AATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAG‑‑‑CTG < 2:2217950/99‑1 AATACATACAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAG‑‑‑CTGC > 1:2053555/1‑100 ATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAG‑‑‑CTGCG > 1:3402692/1‑100 TACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAG‑‑‑CTGCGC < 2:1574233/100‑1 GGCGTGCGCAGGTGCGGAATTTTCCCCAGCGGGGCGACATCCAG‑‑‑CTGCGCACGCCGGGTTTGCTGGTGATGGAGATGGACTCCACCGCCATCCAGATTG > 2:815848/1‑99 CGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAG‑‑‑CTGCGCACTCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCAGATTGAAT > 1:1941585/1‑100 CGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAG‑‑‑CTGCGCACGCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCAGATTGAAT > 2:43619/1‑100 CGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAG‑‑‑CTGCGCACGCCGGGTTTGCTGGGGATGGATATGGACTCCACCGCCATCCAGATTGAAT > 2:3877459/1‑100 GTGCGCAGGTGCGGGATCTTCCCCAGCGGGGCGACATCCAG‑‑‑CTGCGCACGCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCAGATTGAATG > 2:2008117/1‑100 TGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAG‑‑‑CTGCGCACGCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCAGATTGAATGT > 1:302911/1‑100 GCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAG‑‑‑CTGCGCACGCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCAGATTGAATGTA > 1:1883974/1‑100 GGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCACCTGCGCACGCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCAGATTGAATGTATT > 2:1190903/1‑100 GTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCACCTGCGCACGCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCAGATTGAATGTATTG > 2:2719405/1‑100 ATCCAG‑‑‑CTGCGCACGCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCAGATTGAATGTATTGATGAAATTGCCAAACTGGCCGGAACGGGCG < 1:43621/100‑1 CAG‑‑‑CTGCGCACGCCGGGTTTGCTGGTGATGGATATGGACTTCACCGCCATCCATATTGAATGTATTGATGAAATTGCCATATTGGCCGGAACGGGCGAG < 2:1716201/99‑1 CTGCGCACGCCGGGTTTGCTGGTGATGGCTATGGACTCCACCGCCATCCAGATTGAATGTATTGATGAAATTGCCAAACTGGCCGGAACGGGCGAGATGG < 2:2028556/100‑1 CTGCGCACGCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCAGATTGAATGTATTGATGAAATTGCCAAACTGGCCGGAACGGGCGAGATGG > 1:1663364/1‑100 GCGCACGCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCAGATTGAATGTATTGATGAAATTGCCAAACTGGCCGGAACGGGCGAGATGGTG < 1:1386496/100‑1 CGCACGCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCAGATTGAATGTATTGATGAAATTGCCAAACTGGCCGGAACGGGCGAGATGGTGG > 2:3312674/1‑100 CACGCCGGGTTTGCTGGTGATGGATATGGACTCCATCGCCATCCAGATTGAATGTATTGATGAAATTGCCAAACTGGCCGGAACGGGCGAGATGGTGGCG < 1:3305345/100‑1 CACGCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCAGATTGAATGTATTGATGAAATTGCCAAACTGGCCGGAACGGGCGAGATGGTGGCG > 1:2540342/1‑100 ATCAATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAG‑‑‑CTGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4625278‑4625174‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcgcACGCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCAGATTGAATGTATTGATGAAATTGCCAAACTGGCCGGAACGGGCGAGATGGTGGCG > NC_000913/4625219‑4625317 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |