New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 315572NA (NA)26 (0.210) 9/158 NT NA noncoding (344/1255 nt) IS3 repeat region
?NC_000913 = 315588 NA (NA)noncoding (360/1255 nt) IS3 repeat region

Only 100 of 176 total aligned reads displayed.

GTCTTCTGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/315464‑315572
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacatacttcATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTAG  <  NC_000913/315588‑315490
                                                                                                                                                                                                                
GTCTTCTGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCG                                                                                                              <  2:910565/100‑1
GTCTTCTGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGCATGAAGAGCTGGCTATCCTCCAAAAGGCCGCG                                                                                                              <  2:1623022/100‑1
GTCGTCTGAACGTGAACTGGCGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAATAGCTGTCTATCCTCCAAAGGGCCGCG                                                                                                              <  2:1909588/100‑1
 TCTTCTGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGA                                                                                                             <  2:3285999/100‑1
 TCTTCTGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTAGCTATCCTCCAAAAGGCCGCGA                                                                                                             >  1:353656/1‑100
  CTTCTGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAATTTCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGAC                                                                                                            <  1:13336/100‑1
  CTTCTGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGAC                                                                                                            <  2:3557346/100‑1
  CTTCTGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGAC                                                                                                            <  2:405317/100‑1
  CTTCTGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGAC                                                                                                            <  1:1934801/100‑1
  CTTCTGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGAC                                                                                                            >  1:2013163/1‑100
  CTTCTGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGAC                                                                                                            >  1:420699/1‑100
  CTTCTGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGAC                                                                                                            >  1:158163/1‑100
  CTTCTGAACGTGAACTGGAGATGTCTACCCAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGCTGAAGAGCTGGCTATCCTCCAAAAGGCCGCGAC                                                                                                            <  2:2355517/100‑1
   TTCTTAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACA                                                                                                           <  1:1635964/100‑1
   TTCTGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGTTGGCTATCCTCCAAAAGGCCGCGACA                                                                                                           <  1:2381342/100‑1
   TTCTGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACA                                                                                                           <  2:2765827/100‑1
   TTCTGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACA                                                                                                           >  2:2337091/1‑100
   TTCTGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACA                                                                                                           >  1:2905310/1‑100
   TTCTGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGACGCTACA                                                                                                           >  1:682304/1‑100
    TCTGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACAT                                                                                                          >  1:1703051/1‑100
    TCTGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACAT                                                                                                          >  2:2645201/1‑100
    TCTGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACAGGATGAAGAGCTGGCTAACCTCCAAAAGGCCGCGAC                                                                                                            >  2:1579603/1‑98
     CTGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATA                                                                                                         >  1:3679237/1‑100
      TGAACGTGACCTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGCTGCACAGCTGGCTATCCTCCAAAAGTACGCTACATAC                                                                                                        >  2:2398125/1‑100
      TGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATAC                                                                                                        >  1:1726730/1‑100
      TGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATAC                                                                                                        <  2:2464462/100‑1
      TGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCCATCCTCCAAAAGGCCGCG                                                                                                              >  2:2172204/1‑94
       GAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGTTGGCTATCCTCCAAAAGGCCGCGACATACT                                                                                                       <  2:1368499/100‑1
       GAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACT                                                                                                       >  1:141193/1‑100
       GAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACT                                                                                                       >  1:3130218/1‑100
       GAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATAC                                                                                                        <  1:2432784/99‑1
       GAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGCCTATCCTCCAAAAGGCCGCGACATAC                                                                                                        >  1:3622710/1‑99
        AACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACT                                                                                                       <  2:822268/99‑1
         ACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGTTGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTC                                                                                                     <  1:42005/100‑1
         ACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAATAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTC                                                                                                     >  1:1379177/1‑100
         ACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTC                                                                                                     <  1:2115756/100‑1
                               GAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCATTTCAGGCGCTTCGCGAAGTA                                                                               <  1:1843799/100‑1
                                    TGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTTCAAAAGGCCGCGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCG                                                                          <  1:3424162/100‑1
                                     GCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGC                                                                         <  1:252927/100‑1
                                     GCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGC                                                                         <  2:2038413/100‑1
                                     GCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGC                                                                         <  1:3215194/100‑1
                                      CACGTCTCAAACGCTAGCTGGCAGAACGGGATGAAGAGTTGGCTATCCTCCAAAAGGCCGCGACATACTTCATTTCAGGCGCTTCGCCAAGTATGTCGCG                                                                        <  1:2579025/100‑1
                                      CACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTTCAAAAGGCCGCGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCG                                                                        <  1:1198471/100‑1
                                       ACGTCTCAAACGCCAGCTGGCAGAACGGGATGAATAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCATTTCAGGCGCTTCGCGATGTATGTCGCGG                                                                       <  2:2056552/100‑1
                                       ACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGTGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGG                                                                       <  1:1434761/100‑1
                                       ACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGG                                                                       <  1:2424974/100‑1
                                       ACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGG                                                                       <  2:744607/100‑1
                                       ACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCG                                                                        <  1:2036477/99‑1
                                               AACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGAGGCCT                                                                    >  2:287809/1‑95
                                                                                           tcaatacCGACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTG                     <  2:319173/91‑1
                                                                                              cttccgatcTACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACG                <  1:3274553/91‑1
                                                                                                 aaaACATACTTCATTTCAGGCGCTTCGCGAAGTATGCCGCGGCCTTTTGGAGGATAGCTAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAG                   <  2:372394/91‑1
                                                                                                   GACATAGTTCTTTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGGTTTTCATCCCGTTCTGCCAGCTGGCGTTTTAGACGTGCAA           <  2:2297143/100‑1
                                                                                                   GACATACTTCATTTCAGGCGTTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGATGTGCAA           >  2:3924083/1‑100
                                                                                                   GACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGagatc           >  1:1160591/1‑95
                                                                                                   GACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAA           >  2:3690010/1‑100
                                                                                                   GACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAA           >  2:701803/1‑100
                                                                                                   GACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGAAAGCCAGCTCATCATCGCGTTCTGCTAGCTGGCGTTTGAGACGTGCAA           >  2:2648327/1‑100
                                                                                                   GACATACTTCATTTCAGGCACTTCGCGAAGTATGTCGCGGCCTTTTGAAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGT               >  2:1673118/1‑96
                                                                                                    ACATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAAT          >  1:519948/1‑100
                                                                                                     CATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATC         >  1:878960/1‑100
                                                                                                     CATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATC         <  1:3880753/100‑1
                                                                                                     CATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATC         <  1:1865559/100‑1
                                                                                                     CATACTTAATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATC         <  2:1932375/100‑1
                                                                                                      ATACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGCGCAATCT        <  1:2042941/100‑1
                                                                                                       TACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTC       <  1:1010820/100‑1
                                                                                                       TACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTC       >  2:3382078/1‑100
                                                                                                       TACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAAT          <  1:878579/97‑1
                                                                                                        ACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCG      >  1:1279321/1‑100
                                                                                                        ACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCG      >  2:146780/1‑100
                                                                                                        ACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCG      >  2:2813064/1‑100
                                                                                                        ACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTC       >  1:1337171/1‑99
                                                                                                        ACTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGGTTGAGACGGGCAATCTCG      >  2:2917582/1‑100
                                                                                                         CTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGG     >  2:179540/1‑100
                                                                                                         CTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGG     >  2:117833/1‑100
                                                                                                         CTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGG     <  2:1084438/100‑1
                                                                                                         CTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGG     >  2:2307258/1‑100
                                                                                                         CTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGG     >  1:3323532/1‑100
                                                                                                         CTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGATGGCGTTTGAGACGTGCAATCTCGG     >  1:950950/1‑100
                                                                                                         CTTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTAATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCcc       >  2:2549472/1‑96
                                                                                                         CTTAATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCTAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGG     <  2:3550981/100‑1
                                                                                                          TTCATTTCTGGCGCTTCGCGATGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGT    <  1:746558/100‑1
                                                                                                          TTCATTTCAGGCGCTTCGCGAAGTCTGTCGCGCCCTTTTGGAGGATAGCCAACTCTTCATCACATTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGT    >  1:203251/1‑100
                                                                                                          TTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGT    <  2:3795943/100‑1
                                                                                                          TTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGT    >  1:1463805/1‑100
                                                                                                          TTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGT    <  1:2801040/100‑1
                                                                                                          TTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGT    <  2:333993/100‑1
                                                                                                          TTCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCACCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGT    <  1:2552070/100‑1
                                                                                                           TCATTTCAGGCGCTTCGCGAGTTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCATTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTA   <  2:3492212/100‑1
                                                                                                           TCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTA   <  1:3182381/100‑1
                                                                                                           TCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTA   <  2:3753278/100‑1
                                                                                                           TCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTA   >  2:29061/1‑100
                                                                                                           TCATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTA   >  2:1707497/1‑100
                                                                                                            CATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATATCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTAG  <  1:1793754/100‑1
                                                                                                            CATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTAG  >  1:3552198/1‑100
                                                                                                            CATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTAG  <  1:1975545/100‑1
                                                                                                            CATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTAG  <  1:377941/100‑1
                                                                                                            CATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTAG  >  2:2518451/1‑100
                                                                                                            CATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTAG  <  2:932270/100‑1
                                                                                                            CATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTATTCATCCCGTTCTCCCAGCTGGCGTTTGAGACGTGCAATCTCGGTA   >  1:2213103/1‑99
                                                                                                                                                                                                                
GTCTTCTGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/315464‑315572
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacatacttcATTTCAGGCGCTTCGCGAAGTATGTCGCGGCCTTTTGGAGGATAGCCAGCTCTTCATCCCGTTCTGCCAGCTGGCGTTTGAGACGTGCAATCTCGGTAG  <  NC_000913/315588‑315490

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.