| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1334854 | 72 (0.520) | 18 (0.140) | 8/160 | NT | 20.5% | intergenic (+25/‑270) | cysB/ymiA | N‑acetylserine‑responsive cysteine regulon transcriptional activator; autorepressor/uncharacterized protein |
| ? | NC_000913 | = 1334864 | 75 (0.600) | intergenic (+35/‑260) | cysB/ymiA | N‑acetylserine‑responsive cysteine regulon transcriptional activator; autorepressor/uncharacterized protein | |||||
TGTCGTTGATGCGGCTGTCGCATTGCGCTCTAATGAAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCACCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1334748‑1334854‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcaccttCGCTACATAAAAGGTGCCGAAAATAACGCAAGAAATTATTTTTCCGGCAGTTTTATATCTTTAAACATGACCTCAATTTCTTCATTAGAGCGCAATGC < NC_000913/1334864‑1334767 TGTCGTTGATGCGGCTGTCGCATTGCGCTCTAATGAATAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCG < 1:411037/100‑1TGTCGTTGATGCGGCTGTCGCATTGCGCTCTAATGAAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCG < 2:2832814/100‑1 GTCGTTGATGCGGCTGTCGCATTGCGCTCTAATGAAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGG < 2:1645477/100‑1 TCGTTGATGCGGCTGTCGCATTGCGCTCTAATGAAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGC < 2:706479/100‑1 TCGTTGATGCGGCTGTCGCATTGCGCTCTAATGAAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGC < 2:326538/100‑1 CGTTGATGCGGCTGTCGCATTGCGCTCTAATGAAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCA > 2:3570907/1‑100 GTTGATGCGGCTGTCGCATTGCGCTCTAATGAAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCAC < 2:856183/100‑1 GTTGATGCGGCTGTCGCATTGCGCTCTAATGAAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCAC > 2:3317925/1‑100 GTTGATGCGGCTGTCGCATTGCGCTCTAATGAAGAAATTGAGGGCATGTTTAAAGCTATCAAACTGCCGGAAAAAAAATTTCTTGCGTTATTTTC > 2:1684197/1‑95 TGATGCGGCTGTCGCATTGCGCTCTAATGAAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCACCT < 1:1214089/100‑1 TGATGCGGCTGTCGCATTGCGCTCTAATGAAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCACCT > 1:432098/1‑100 TGATGCGGCTGTCGCATTGCGCTCTAATGAAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCA > 2:2374386/1‑97 TGATGCGGCTGTCGCATTGCGCGCTAATGAAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCACCT > 1:975357/1‑100 CGCTCTAATGAAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCACCTTCGCTACATAAAAGGTGCC < 1:3156862/100‑1 CGCTCTAATGAAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCACCTTCGCTACATAAAAGGTGCC < 2:1393386/100‑1 GCTCTAATGAAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCACCTTCGCTACATAAAAGGTGCCG < 1:2198976/100‑1 GCTCTAATGAAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCACCTTCGCTACATAAAAGGTGCCG < 2:3298146/100‑1 cttTAATGAAGAAATTGAGGTCATGTTTAAATATATATAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCACCTTCGCTACATAAAAGGTGCCGA < 1:507433/97‑1 CTCTAATGAAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCACCTTCGCTACATAAAAGGTGCCGA < 1:2093408/100‑1 CTCTAATGAAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCACCTTCGCTACATAAAAGGTGCCGA < 2:1681690/100‑1 CTCTAATGAAGAAATTGAGGTCAAGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCATAACATTCGCTACATAAAAGaaaccgt > 2:1226991/1‑93 TCTAATGAAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCACCTTCGCTACATAAAAGGTGCCGAA < 2:2514912/100‑1 TCTAATGAAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCACCTTCGCTACATAAAAGGTGCCGAA < 1:1318660/100‑1 TCTAATGAAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCACCTTCGCTACATAAAAGGTGCCGAA < 2:1222874/100‑1 TCTAATGAAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCACCTTCGCTACATAAAAGGTGCCGAA < 1:806107/100‑1 TCTAATGAAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCACCTTCGCTACATAAAAGGTGCCGAA < 1:1769395/100‑1 TAATGAAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGTCACCTTCGCTACATAAAAGGTGCCGAAAA < 2:616959/100‑1 ATGAAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCGTGCGTTATTTCCGGCACCTTCGCTACATAAAAGGTGCCGAA < 2:2113483/96‑1 TGAAGAAATTGAGGTCATGTTTAAAGATATATAACTGCGGGAAAAATAATTTCTTGCTTTATTTTCGGCACCTTCGCTACATAAAAGGTGCCGAAAATA < 2:1482163/99‑1 AAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCGCCTTCGCTACATAAAAGGTGCCGAAAATAACG < 2:1400393/100‑1 ttTTTAAAAATTTAAAACTGCCGGAAAAATTATTTATTTCGTTATTTTCGGCACCTTCGCTACATAAAAGGTGCCGAAAATAACGCAAGAAATTATTTTT < 1:1873750/98‑1 ttccgtttCCTTCGCTACATAAAAGGTGCCGAAAATAACGCAAGAAATTATTTTTCCGGCAGTTTTATATCTTTAAACATGACCTCAATTTCTTCATTAG < 1:1676447/92‑1 CGGCACCTTCGCTACATAAAAGGTGCCGAAAATAACGCAAGAAATTATTTTTCCGGCAGTTTTATATCTTTAAACATGACCTCAATTTCTTCATTAGAGC < 2:1877400/100‑1 GGCACCTTCGCTACATAAAAGGTGCCGAAAATAACGCAAGAAATTATTTTTCCGGCAGTTTTATATCTTTAAACATGACCTCAATTTCTTCATTAGAGCG > 2:929932/1‑100 cCACCTTAGCTACATAAAAGGTGCCGAAAATAACGCAAGAAATTATTTTTCCGGTAGTTTTATATCTTTATACATGACTTTTATTTCTCCATTAGAGCGC < 2:1942309/99‑1 GCACCTTCGCTACATAAAAGGTGCCGAAAATAACGCAAGAAATTATTTTTCCGGCAGTTTTATATCTTTAAACATGACCTCAATTTCTTCATTAGAGCGC < 2:2695225/100‑1 CACCTTCGCTACATAAAAGGTGCCGAAAATAACGCAAGAAATTATTTTTCCGGCAGTTTTATATCTTTAAACATGACCTCAATTTCTTCATTAGAGCGCA > 1:687623/1‑100 CACCTTCGCTACATAAAAGGTGCCGAAAATAACGCAAGAAATTATTTTTCCGGCAGTTTTATATCTTTAAACATGACCTCAATTTCTTCATTAGAGCGCA < 2:665511/100‑1 ACCTTCGCTACATAAAAGGTGCCGAAAATAACGCAAGAAATTATTTTTCCGGCAGTTTTATATCTTTAAACATGACCTCAATTTCTTCATTAGAGCGCAA > 2:1838734/1‑100 ACCTTCGCTACATAAAAGGTGCCGAAAATAACGCAAGAAATTATTTTTCCGGCAGTTTTATATCTTTAAACATGACCTCAATTTCTTCATTAGAGCGCAA < 2:1660951/100‑1 ACCTTCGCTACATAAAAGGTGCCGAAAATAACGCAAGAAATTATTTTTCCGGCAGTTTTATATCTTTAAACATGACCTCAATTTCTTCATTAGAGCGCAA < 1:3084852/100‑1 CCTTCGCTACATAAAAGGTGCCGAAAATAACGCAAGAAATTATTTTTCCGGCAGTTTTATATCTTTAAACATGACCTCAATTTCTTCATTAGAGCGCAAT < 2:1010704/100‑1 CTTCGCTATATAAAAGGTGCCGAAAATAACGCAAGAAATTATTTTTCCGGCAGTTTTATATCTTTAAACATGACCTCAATTTCTTCATTAGAGCGCA < 1:3340599/97‑1 CTTCGCTACATAAAAGGTGCCGAAAATAACGCAAGAAATTATTTTTCCGGCAGTTTTATATCTTTAAACATGACCTCAATTTCTTCATTAGAGCGCAATG > 1:55913/1‑100 TTCGCTACATAAAAGGTGCCGAAAATAACGCAAGAAATTATTTTTCCGGCAGTTTTATATCTTTAAACATGACCTCAATTTCTTCATTAGAGCGCAATGC < 1:1630263/100‑1 TGTCGTTGATGCGGCTGTCGCATTGCGCTCTAATGAAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAATTTCTTGCGTTATTTTCGGCACCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1334748‑1334854‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcaccttCGCTACATAAAAGGTGCCGAAAATAACGCAAGAAATTATTTTTCCGGCAGTTTTATATCTTTAAACATGACCTCAATTTCTTCATTAGAGCGCAATGC < NC_000913/1334864‑1334767 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |