New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2593024NA (NA)9 (0.070) 6/164 NT NA noncoding (47/83 nt) REP180 (repetitive extragenic palindromic) element; contains 2 REP sequences REP180 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 2593056 NA (NA)noncoding (79/83 nt) REP180 (repetitive extragenic palindromic) element; contains 2 REP sequences REP180 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 190 total aligned reads displayed.

CGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCT  >  NC_000913/2592926‑2593123
                                                                                                  |                                                                                                   
cgacgaCTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATg                                                                                                    >  2:1269278‑M1/1‑99 (MQ=255)
 gacgacTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCAGGATAAGGCGTTAACGCCGCATCCGGCATTGGTGAACGAtac                                                                                                   <  1:2654808/100‑3 (MQ=255)
  acggcaggCAGAAAAAGGATCACCCGAAGAAGTAAGCGGAGTGCACAACCGTAGGCCGGATAAGGCCTTAACGCCGCACCCGGCAATGGAGAACGATAcc                                                                                                  <  2:2723739/94‑1 (MQ=25)
      cTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATgcctgat                                                                                              >  2:3377774‑M1/1‑93 (MQ=255)
        ggCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGc                                                                                            <  1:1666966/100‑1 (MQ=255)
          ccGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGa                                                                                          >  1:2500458/1‑100 (MQ=255)
          ccGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGa                                                                                          >  1:2206763/1‑100 (MQ=255)
           cGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGAc                                                                                         >  1:3346315/1‑100 (MQ=255)
               aaaTGATCAACCGAAGAAGTAAGTTGAGTGCTCAATCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTc                                                                                     <  1:2063157/100‑1 (MQ=255)
                  ggATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAcg                                                                                  >  1:3276054/1‑100 (MQ=255)
                  ggATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAcg                                                                                  <  1:581178/100‑1 (MQ=255)
                   gATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAcgc                                                                                 >  1:3435846/1‑100 (MQ=255)
                   gATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAcgc                                                                                 <  2:334867/100‑1 (MQ=255)
                      cAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGtn                                                                              <  1:3633583/100‑2 (MQ=255)
                       aaCCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCt                                                                             >  2:2545527/1‑100 (MQ=255)
                        aCCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCtt                                                                            >  1:852563/1‑100 (MQ=255)
                          cGAAGAAGTAAGCTGTGTGCTCAACCTTAGGCTGGATAAGGCGTTAACTCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTc                                                                              <  1:536926/96‑1 (MQ=25)
                          cGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTAT                                                                          <  2:1348199‑M2/100‑1 (MQ=255)
                            aagaagTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCA                                                                        >  2:1373122‑M2/1‑100 (MQ=255)
                              gaagTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATgcctgataagacgcgtgagcgtcgcatcagg                                                                      <  1:3610434‑M1/100‑32 (MQ=255)
                               aagTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGTCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGC                                                                     >  1:1232291‑M2/1‑100 (MQ=255)
                                agTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGCTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGag                                                                    <  1:1561173‑M2/100‑3 (MQ=255)
                                 gTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATTCGGCAATGGTGAACGATgcctgataagacgcgtgagcgtcgcatcaggcat                                                                   <  1:1567355‑M1/100‑35 (MQ=255)
                                 gTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATgcctgataagacgcgtgagcgtcgcatcaggcat                                                                   <  2:1993024‑M1/100‑35 (MQ=255)
                                 gTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCa                                                                   <  2:1670765/100‑1 (MQ=255)
                                 gTAAGCTGAGTGCTCAACCGCAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGTGTCTTATCAGGCCa                                                                   >  2:2624244/1‑100 (MQ=255)
                                  tAAGCTGAGTGCTCAACCGTAGGTCGGATAAGGCGTTAACGCCGCATGCGGCAATGGTGAACGATgcctgataagacgcgtgagcgtcgcatcaggcatc                                                                  <  1:1783074‑M1/100‑36 (MQ=255)
                                  tAAGCTGAGTGCTCAACCGTAGGCCGGATAAGTCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAg                                                                  <  1:1209416/100‑1 (MQ=255)
                                  tAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAg                                                                  <  1:1463575/100‑1 (MQ=255)
                                   aaGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAg                                                                  >  2:668237/1‑99 (MQ=255)
                                     gCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTa                                                               >  1:2854013/1‑100 (MQ=255)
                                     gCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTa                                                               <  2:3474096/100‑1 (MQ=255)
                                       tGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATgcctgataagacgcgtgagcgtcgcatcaggcatcgttca                                                             <  1:1036392‑M1/100‑41 (MQ=255)
                                       tGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGt                                                                <  2:3576062/97‑1 (MQ=255)
                                       tGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAAt                                                             <  2:781128/100‑1 (MQ=255)
                                        gAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATc                                                            <  1:3889576/100‑1 (MQ=255)
                                          gTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGTATTCGGCAATGGTGAACGATGCCTGATGCGACGCGCACGCGTCTTATCAGGCCAGGTAATCTg                                                          <  1:1330578/100‑1 (MQ=255)
                                          gTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTg                                                          <  1:2432540/100‑1 (MQ=255)
                                            gCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGGCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTc                                                        >  2:3006196/1‑100 (MQ=255)
                                            gCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTc                                                        >  2:2669778/1‑100 (MQ=255)
                                            gCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTc                                                        <  2:464846/100‑1 (MQ=255)
                                            gCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTc                                                        >  1:711877/1‑100 (MQ=255)
                                             cTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCt                                                       <  1:2545550/100‑1 (MQ=255)
                                             cTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCt                                                       >  2:1536378/1‑100 (MQ=255)
                                             cTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCt                                                       >  1:499071/1‑100 (MQ=255)
                                             cTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGCGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCt                                                       >  2:2168526/1‑100 (MQ=255)
                                              tCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCtt                                                      <  1:2297748/100‑1 (MQ=255)
                                               ttcaccattgCCGGATGCGGCGTTAACGCCTTATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCttt                                                     >  1:3021453/10‑100 (MQ=21)
                                                 aCCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTa                                                   <  1:3749296/100‑1 (MQ=255)
                                                  ccGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTAc                                                  <  2:1771246/100‑1 (MQ=255)
                                                  accattgCCGGATGCGGCGTTAACGCCTTATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTAc                                                  >  1:2807964/7‑100 (MQ=25)
                                                   cGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTAca                                                 <  2:276157/100‑1 (MQ=255)
                                                    gTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTAcat                                                <  1:2164277/100‑1 (MQ=255)
                                                     tAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCGTGAGCGTCGCATCAGGCatcgttcaccattgccggatgc                                               >  1:2210829‑M2/1‑78 (MQ=255)
                                                     attgCCGGATGCGGCGTTAACGCCTTATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTAcatc                                               >  1:3659133/4‑100 (MQ=25)
                                                       ggCCTGATAAGGCGTTAAAAACGCATTCGGCAATGGTGAACGATTCCTGATGCGACGCTCACGCGCGTTATCAGGCCAGGTAATCTGTCTTTTAcatcat                                             >  2:650237/1‑100 (MQ=25)
                                                       ggCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTAcatcat                                             >  2:3868933/1‑100 (MQ=255)
                                                       ggCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTAcatcat                                             >  1:957937/1‑100 (MQ=255)
                                                       ggCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTAcatcat                                             >  1:1567006/1‑100 (MQ=255)
                                                        gCCGGATGCGGCGTTAACGCCTTATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCAtt                                            >  1:3922158/1‑100 (MQ=37)
                                                        gCCGGATGCGGCGTTAACGCCTTATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGATAATCTGTCTTTTAcatcat                                             >  1:2342636/1‑99 (MQ=25)
                                                         ncggatgcggCGTTAACGCCTTATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCAttt                                           >  2:1050782/9‑100 (MQ=37)
                                                         ccGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCAttt                                           >  1:3679399/1‑100 (MQ=255)
                                                           ggATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCa                                         <  1:3712250/100‑1 (MQ=255)
                                                            gATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCaa                                        <  2:627341/100‑1 (MQ=255)
                                                            gATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGAGGCGATGCTCACGAGTCTTATCAAGACAGGTAATATGTCTTTTACATCATTTCaa                                        >  2:3132441/1‑100 (MQ=25)
                                                              tAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATc                                      <  1:1961179/100‑1 (MQ=255)
                                                              tAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATc                                      >  2:2871925/1‑100 (MQ=255)
                                                              tAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATc                                      <  2:3852407/100‑1 (MQ=255)
                                                              tAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATc                                      <  2:3875966/100‑1 (MQ=255)
                                                               aaGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATca                                     <  2:2935726/100‑1 (MQ=255)
                                                                 ggCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATcaca                                   <  2:3644625/100‑1 (MQ=255)
                                                                  gCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCAcat                                  >  2:3421945/1‑100 (MQ=255)
                                                                  gCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCAcat                                  >  2:2516780/1‑100 (MQ=255)
                                                                  gCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCAcat                                  >  1:1546945/1‑100 (MQ=255)
                                                                    gTTAACGCCGCATCCGGCAATGGTGAACTATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCAcatca                                <  1:365062/100‑1 (MQ=255)
                                                                     ttAACGCCTTATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCAcatcat                               >  2:3514574/1‑100 (MQ=255)
                                                                      tAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATAATTTCAATCAcatca                                >  1:3382937/1‑98 (MQ=255)
                                                                       aaCGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCAcatcatca                             <  2:2500435/100‑1 (MQ=255)
                                                                       aaCGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCAcatcatca                             >  1:3174252/1‑100 (MQ=255)
                                                                        aCGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATGTCAATCAcatcatca                             >  2:2385132/1‑99 (MQ=255)
                                                                         cgccgcATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACatcatcatc                           >  2:737635/1‑100 (MQ=255)
                                                                         cgccgcATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACatcatcatc                           >  2:1527893/1‑100 (MQ=255)
                                                                           ccgcATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGc                         <  1:2952876/100‑1 (MQ=255)
                                                                            cgcATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGcc                        >  1:357955/1‑100 (MQ=255)
                                                                             gcATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCa                       <  2:2018112/100‑1 (MQ=255)
                                                                               aTCCGGCAATGGTGAACGATGTCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAgg                     <  1:3539964/100‑1 (MQ=255)
                                                                                tCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGc                    <  1:1536393/100‑1 (MQ=255)
                                                                                    gCAATGGTGAACGATGCCTGATGTGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTa                 <  1:1156993/99‑1 (MQ=255)
                                                                                     cAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAggagatcg               >  2:1127937/1‑94 (MQ=255)
                                                                                          gTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCAc          >  1:1899053/1‑100 (MQ=255)
                                                                                          gTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCAc          <  2:2336995/100‑1 (MQ=255)
                                                                                           tGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCatcgttcaccattgccggatgcggcgttaacgccttatccggcctacggttgagcactca         <  1:1036392‑M2/100‑61 (MQ=255)
                                                                                             aaCGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTa       >  2:3277950/1‑100 (MQ=255)
                                                                                               cGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAgc     <  1:72291/100‑1 (MQ=255)
                                                                                               cGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAgc     <  2:2219102/100‑1 (MQ=255)
                                                                                                gATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAgc     <  2:3590335/99‑1 (MQ=255)
                                                                                                 aTGCCTGATGCGACGCTCACGCGTCTTATCAGGCatcgttcaccattgccggatgcggcgttaacgccttatccggcctacggttgagcactcagcttac   <  1:27246‑M2/100‑67 (MQ=255)
                                                                                                 aTGCCTGATGCGACGCTCAAGCGACTTATCAGGCatcgatcaccattgccggatgcggcgttaacgacttatccggcctacggttgagcactcagcttac   <  2:1166093‑M2/100‑67 (MQ=255)
                                                                                                  tGCCTGATGCGACGCTCACGCGTCTTATCAGGCatcgttcaccattgccggatgcggcgttaacgccttatccggcctacggttgagcaatcagcttact  <  2:3912059‑M2/100‑68 (MQ=255)
                                                                                                  |                                                                                                   
CGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCT  >  NC_000913/2592926‑2593123

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.