New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3470738 =NA (NA)10 (0.080) 4/168 NT NA coding (592/1185 nt) tufA translation elongation factor EF‑Tu 1
?NC_000913 3470767 = NA (NA)coding (563/1185 nt) tufA translation elongation factor EF‑Tu 1

Only 100 of 125 total aligned reads displayed.

ATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAGTGTCGTCGCCCGGGAAGTCGTACTG  >  NC_000913/3470668‑3470852
                                                                                                   |                                                                                     
aTGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGAttt                                                                                       <  2:1707487/100‑1 (MQ=33)
 tGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGAtttt                                                                                      >  1:2978976/1‑100 (MQ=33)
 tGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGAtttt                                                                                      >  1:809809/1‑100 (MQ=32)
 tGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGAtttt                                                                                      <  1:3178701/100‑1 (MQ=33)
  ggAGAATACGTCTTCGATCGGCAGCAGGAACTGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTc                                                                                     <  1:280013/100‑1 (MQ=18)
  ggAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTc                                                                                     >  2:1679964/1‑100 (MQ=32)
  ggAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTc                                                                                     <  1:448461/100‑1 (MQ=33)
  ggAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTc                                                                                     <  1:3554998/100‑1 (MQ=33)
  ggAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTc                                                                                     <  1:3390545/100‑1 (MQ=33)
   gagaATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCg                                                                                    <  2:1868075/100‑1 (MQ=33)
   gagaATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCg                                                                                    <  1:3211755/100‑1 (MQ=33)
   gagaATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCg                                                                                    <  2:1389092/100‑1 (MQ=33)
    agaATACGTCTTCGATCGGCAGCAGGCACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGc                                                                                   >  1:1131664/1‑100 (MQ=17)
    agaATACGTCTTCGATCGGCAGCAGGAAGGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCg                                                                                    <  1:964817/99‑1 (MQ=18)
      aaTACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCtt                                                                                 <  1:3722076/100‑1 (MQ=33)
       aTACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTc                                                                                <  1:1487460/100‑1 (MQ=33)
        tACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGTTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTcc                                                                               <  1:684261/100‑1 (MQ=17)
        tACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTcc                                                                               <  2:1851529/100‑1 (MQ=33)
        tACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTcc                                                                               <  1:3455358/100‑1 (MQ=33)
        tACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTcc                                                                               >  1:2116967/1‑100 (MQ=33)
        tACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAAGAAGCCAGCCAGTTCCAGGATTTTCGCTTcc                                                                               >  1:2119251/1‑100 (MQ=18)
         aCGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCATGAAGCCAGCCAGTTCCAGGATTTTCGCTTccc                                                                              <  2:355139/100‑1 (MQ=18)
         aCGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTccc                                                                              <  2:2344213/100‑1 (MQ=33)
          cGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCa                                                                             >  1:1627875/1‑100 (MQ=33)
          cGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCa                                                                             >  1:871784/1‑100 (MQ=32)
           gTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCAc                                                                            >  1:155715/1‑100 (MQ=33)
           gTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGAAAGCCAGCCAGTTCCAGGATTTTCACTTCCCAc                                                                            >  1:3734901/1‑100 (MQ=12)
            tCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCAct                                                                           >  2:2254494/1‑100 (MQ=33)
             cTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCActc                                                                          >  1:875626/1‑100 (MQ=32)
             cTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCActc                                                                          <  1:3332823/100‑1 (MQ=33)
              ttCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGTTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCActct                                                                         <  1:2982674/100‑1 (MQ=17)
                cGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGc                                                                       >  1:3558084/1‑100 (MQ=33)
                cGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGc                                                                       >  1:2302175/1‑100 (MQ=33)
                cGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTACAGGATTTTCGCTTCCCACTCAGc                                                                       >  2:2481228/1‑100 (MQ=16)
                 gATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCg                                                                      >  2:3075519/1‑100 (MQ=33)
                  aTCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGc                                                                       >  2:3650164/1‑98 (MQ=32)
                  aTCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGt                                                                     >  2:2846625/1‑100 (MQ=33)
                     ggCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCg                                                                   <  2:1627860/99‑1 (MQ=33)
                     ggCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGc                                                                  >  1:917765/1‑100 (MQ=32)
                     ggCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGc                                                                  >  2:1180045/1‑100 (MQ=33)
                     ggCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGc                                                                  >  1:3783957/1‑100 (MQ=33)
                      gcagcaGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGcc                                                                 >  2:1502849/1‑100 (MQ=33)
                       cagcagGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCt                                                                >  1:813642/1‑100 (MQ=33)
                       cagcagGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCt                                                                <  1:1657185/100‑1 (MQ=32)
                        agcagGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCtt                                                               >  2:13271/1‑100 (MQ=33)
                        agcagGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCt                                                                <  1:409661/99‑1 (MQ=32)
                         gcagGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTc                                                              <  2:1964808/100‑1 (MQ=32)
                         gcagGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTc                                                              >  1:2527208/1‑100 (MQ=33)
                         gcagGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAAGAAGCCAACCAATTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTc                                                              >  1:1038690/1‑100 (MQ=255)
                          cagGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGATTCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTcc                                                             <  1:1210714/100‑1 (MQ=17)
                          cagGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCAAGGATTTTCGCTTCCCACTCTGCGTCGCCTTcc                                                             >  1:1243994/1‑100 (MQ=17)
                           agGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCa                                                            <  1:3918519/100‑1 (MQ=33)
                            ggAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAg                                                           <  2:3074139/100‑1 (MQ=33)
                            ggAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAg                                                           >  2:1858306/1‑100 (MQ=33)
                            ggAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAg                                                           >  2:2279413/1‑100 (MQ=33)
                            ggAACGGCTTGTCAATCGCACGCTCTGGTTCAGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTGCAg                                                           >  2:603834/1‑100 (MQ=16)
                              aaCGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAgcg                                                         <  2:2116948/100‑1 (MQ=33)
                               aCGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAgcgc                                                        <  1:3658069/100‑1 (MQ=33)
                                 ggCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTAGCATCCAACTCTGCGTCGCCTTCCAGCGCtt                                                      >  1:510963/1‑100 (MQ=255)
                                  gCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCttt                                                     >  2:488839/1‑100 (MQ=33)
                                  gCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCttt                                                     >  1:545090/1‑100 (MQ=32)
                                  gCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCttt                                                     >  1:2515003/1‑100 (MQ=33)
                                   cTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGACTCCAGGAAGCCAGCCACTTCCAGGATTTTCTCTTCCCACTTTGCGTCCCCATCCaccactatc                                                    >  1:1597005/1‑92 (MQ=11)
                                   cTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTc                                                    <  2:2072807/100‑1 (MQ=33)
                                     tGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCag                                                  <  1:110096/100‑1 (MQ=32)
                                      gTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCaga                                                 <  1:1097922/100‑1 (MQ=32)
                                       tCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCagag                                                >  2:3403780/1‑100 (MQ=33)
                                       tCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTATCGCTTGCCACTCTGCGTCGCCTTCCAGCGCTTTCaga                                                 >  2:2753711/1‑99 (MQ=16)
                                        cAATCGCACGCTCTTGTTCCTGAATATAAGAATCCACGAAGCCAGCCAGTTCCATGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTGTCAGAGc                                               <  2:290374/100‑1 (MQ=11)
                                        cAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGCTTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGc                                               >  2:3716696/1‑100 (MQ=18)
                                        cAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGc                                               >  1:995673/1‑100 (MQ=32)
                                        cAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGc                                               <  2:1887426/100‑1 (MQ=33)
                                        cAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGc                                               <  1:3650203/100‑1 (MQ=33)
                                         aaTCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCa                                              <  1:2400277/100‑1 (MQ=32)
                                          aTCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAg                                             >  1:3107108/1‑100 (MQ=33)
                                           tCGCACGCTCTGGTTCCGGAATATAAGAATCCATGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGa                                            <  1:3324684/100‑1 (MQ=17)
                                            cGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGa                                            >  2:1546788/1‑99 (MQ=33)
                                              cACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAAcc                                         <  2:2231463/100‑1 (MQ=32)
                                               aCGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTCCCAGCGCTTTCAGAGCAGAACCa                                        <  2:3479660/100‑1 (MQ=18)
                                                  ctctGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCacga                                     >  2:981523/1‑100 (MQ=32)
                                                    ctGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCacgaac                                   <  2:1862715/100‑1 (MQ=33)
                                                      ggTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCacgaacga                                 >  1:2957531/1‑100 (MQ=33)
                                                      ggTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCacgaacga                                 >  1:239120/1‑100 (MQ=33)
                                                      ggTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCacgaacga                                 >  1:3085605/1‑100 (MQ=33)
                                                      ggTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCacgaacga                                 >  1:2969685/1‑100 (MQ=33)
                                                      ggTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCacgaacga                                 >  2:2655869/1‑100 (MQ=32)
                                                       gTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCAACTTAAAGCGCTTTCAGAGCAGAACCacgaacga                                 >  1:1282778/1‑99 (MQ=11)
                                                       gTTACGGAATATAAGAAACCAGGAAACAAGCCAGTTACAGGATTTTCGCTTACCACTCTGCGTCGCATTCCAGCGCTTTCAGAGCAGAACCAGAAACGAt                                >  2:2975756/1‑100 (MQ=11)
                                                        ttCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATc                               <  2:253619/100‑1 (MQ=33)
                                                        ttCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATc                               <  1:2240464/100‑1 (MQ=33)
                                                          ccGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGAt                                >  2:2553685/1‑97 (MQ=33)
                                                          ccGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCgg                             <  1:3873487/100‑1 (MQ=33)
                                                           cGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCAGa                            >  1:1211786/1‑100 (MQ=18)
                                                            ggAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAg                           <  1:2722931/100‑1 (MQ=33)
                                                            ggAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAg                           >  2:2422748/1‑100 (MQ=33)
                                                            ggAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAg                           <  1:2005981/100‑1 (MQ=33)
                                                               atatAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAgtgt                        <  1:457922/100‑1 (MQ=32)
                                                               atatAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACAAACGATCGGAgtgt                        >  1:822164/1‑100 (MQ=17)
                                                                 ataAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAgtg                         >  2:160936/1‑97 (MQ=11)
                                                                                     ccggTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGTAGTGTCTTCGCCCGGGAAGTCGTACTg  <  2:3775706/97‑1 (MQ=0)
                                                                                                   |                                                                                     
ATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAGTGTCGTCGCCCGGGAAGTCGTACTG  >  NC_000913/3470668‑3470852

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.