| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3620119 = | NA (NA) | 12 (0.090) | 4/166 | NT | 100% | coding (928/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
| ? | NC_000913 | 3620146 = | 0 (0.000) | coding (955/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor | |||||
GACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACA > NC_000913/3620047‑3620245 | gtatttatcatcgtaagtaaagctgtgcatctgtttgtcactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcggc < 1:1822950‑M2/1‑1 (MQ=255)gtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcggc < 1:1910082‑M2/1‑1 (MQ=255)gtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcggc < 1:3138824‑M2/1‑1 (MQ=255) tatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcggcg > 2:454219‑M2/99‑100 (MQ=255) tatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcggcg < 2:3896023‑M2/2‑1 (MQ=255) tatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcggcg < 1:2829657‑M2/2‑1 (MQ=255) atttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcggcgc > 1:3810995‑M2/98‑100 (MQ=255) tttatcatcttaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcggcgcg < 1:712259‑M2/4‑1 (MQ=255) tttatcatcgtaagtaaagctgcgcacctgtttgccgctacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcggcgcg < 2:1520627‑M2/4‑1 (MQ=255) tttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcggcgcg > 1:15403‑M2/97‑100 (MQ=255) tttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcaccgcgtggcgtccagccatagcgcaccagcggcgcg < 2:2516959‑M2/4‑1 (MQ=255) ttatcatcgtaagtaaagctgctcacctgtttgccactacggtcatacaccaacgccagttcgccgcgtggcgtccagccatagcgcaccagcggcgcgt < 1:2436337‑M2/5‑2 (MQ=255) ttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcggcgcgg < 1:2350931‑M2/5‑1 (MQ=255) ttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcggcgcgg < 2:3382046‑M2/5‑1 (MQ=255) ttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcggcgcgg > 2:1061166‑M2/96‑100 (MQ=255) ttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggagtccagccatagcgcaccagcggcgcgg > 1:1830515‑M2/96‑100 (MQ=255) tatcttcgtaagtaaagctgctcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcggcgcggc < 1:721461‑M2/6‑1 (MQ=255) tatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcacccgcggcg > 2:2718716‑M2/95‑96 (MQ=255) tatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcggcgcggc > 1:2338334‑M2/95‑100 (MQ=255) tatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcggcgcggc > 2:3674150‑M2/95‑100 (MQ=255) tatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcggcgcggc > 2:113313‑M2/95‑100 (MQ=255) caccgccagttcgccgcgtggcgtccagccatagcgcacca‑GCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTttacttac > 1:374435‑M2/42‑100 (MQ=255) agttcgccgcgtggcgtccagccatagcgcaccagcggCGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACga > 1:741336‑M2/39‑100 (MQ=255) gttcgccgcgtggcgtccaaacatagcgcaccagcggCGCGGCGAACTGGCGGTGGTGTATGACCCTAGTGGCAAACAGGTTCGCCGCTttactta > 2:600576‑M2/38‑96 (MQ=255) ttcgccgcgtggcgtccagccatagcgcaccagcggCGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACgatg > 1:986864‑M2/37‑100 (MQ=255) ttcgccgcgtggcgtccagccatagcgcaccagcggCGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACgat > 1:493483‑M2/37‑99 (MQ=255) cgccgcgtggcgtccagccatagcgcaccagcggCGCGGCGCACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACgatgat > 2:3194539‑M2/35‑100 (MQ=255) cgccgcgtggcgtccagccatagcgcaccagcggCGCGGCGAACTGGCGGTGGTGTATAACCGTAGAGGCAAACAGGTGCGCAGCTTTACTTACgatgat > 1:1192219‑M2/35‑100 (MQ=255) cgccgcgtggcgtccagccatagcgcaccagcggCGCGGCCAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACgctgat > 2:3195097‑M2/35‑100 (MQ=255) gttcgccgcgtggcgtccagccatagcgcacca‑GCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATaa > 1:747250‑M2/34‑100 (MQ=255) cgccgcgtggcgtccagccatagcgcacca‑GCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATa > 2:1370795‑M2/31‑100 (MQ=255) cgccgcgtggcgtccagccatagcgcacca‑GCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATa > 2:2302178‑M2/31‑100 (MQ=255) cgccgcgtggcgtccagccatagcgcacca‑GCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATa > 1:936046‑M2/31‑100 (MQ=255) CGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCCAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTcaca > 1:1465226‑M2/1‑100 (MQ=255) CGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAGATACCGGGGCCGGATGGTGGCGCACCGTcaca < 1:3729345‑M2/100‑1 (MQ=255) | GACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACA > NC_000913/3620047‑3620245 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |