New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4607047140 (1.000)6 (0.050) 6/168 NT 4.1% coding (654/1032 nt) rsmC 16S rRNA m(2)G1207 methyltransferase, SAM‑dependent
?NC_000913 = 4607088 146 (1.110)coding (613/1032 nt) rsmC 16S rRNA m(2)G1207 methyltransferase, SAM‑dependent
Rejected: Frequency below cutoff threshold.

Only 100 of 182 total aligned reads displayed.

CGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTAAACACGCCAG  >  NC_000913/4606989‑4607183
                                                                                                   |                                                                                               
 gcgGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAg                                                                                                >  2:3134626‑M2/1‑99 (MQ=255)
   ggctggctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgcc                                                                                              >  2:3666685‑M2/1‑97 (MQ=255)
    gctggctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCGAAGGCAACTGAAAGCACGCCCGCGCCACAgccg                                                                                             <  2:254084‑M2/100‑5 (MQ=255)
    gctggctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgccn                                                                                             >  1:499464‑M2/1‑96 (MQ=255)
    gctggctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgccg                                                                                             >  1:2485675‑M2/1‑96 (MQ=255)
    gctggctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgccg                                                                                             >  2:3564334‑M2/1‑96 (MQ=255)
    gctggctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgccg                                                                                             <  2:2295005‑M2/100‑5 (MQ=255)
     ctggctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgccga                                                                                            <  2:3692578‑M2/100‑6 (MQ=255)
      tggctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGAc                                                                                           <  1:3833399/100‑1 (MQ=255)
       ggctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTACGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACa                                                                                          >  2:1751766/1‑100 (MQ=255)
         ctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATc                                                                                        >  1:2816986/1‑100 (MQ=255)
           tCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCa                                                                                      <  1:3753218/100‑1 (MQ=255)
           tCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCa                                                                                      <  1:1726598/100‑1 (MQ=255)
            cTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAg                                                                                     >  2:1545107/1‑100 (MQ=255)
            cTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAg                                                                                     <  2:595838/100‑1 (MQ=255)
             tACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGc                                                                                    >  1:1885957/1‑100 (MQ=255)
             tACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGc                                                                                    >  2:556163/1‑100 (MQ=255)
              aCCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCa                                                                                   >  1:3311225/1‑100 (MQ=255)
              aCCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCa                                                                                   >  1:2254427/1‑100 (MQ=255)
               ccgccgGAGCAGAGACATCGAACAAGGTGAGACGAATTTTCGACGAATGTCGCGCAAAGGCACCTGAAATCCCGCCCGCACCACAGCCGACATCcaccac                                                                                  >  2:1157761/1‑100 (MQ=255)
                 gccgGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACtt                                                                                <  1:821627/100‑1 (MQ=255)
                   cgGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTa                                                                              <  1:1929269/100‑1 (MQ=255)
                   cgGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTa                                                                              <  1:1418555/100‑1 (MQ=255)
                    ggtgCAGAGACATCGCACAAGGTGAGACGATTTTTCGGCGAATGGTGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTAc                                                                             <  1:55763/97‑1 (MQ=255)
                    ggggCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTAc                                                                             >  1:3653578/1‑100 (MQ=255)
                     gggCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTAcc                                                                            <  1:2798750/100‑1 (MQ=255)
                      ggCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTAcc                                                                            <  2:2626008/99‑1 (MQ=255)
                       gCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCTAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCtt                                                                          <  1:3211260/100‑1 (MQ=255)
                       gCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACATCCGACATCCAGCACTTTACCt                                                                           <  2:1234671/99‑1 (MQ=255)
                         atataCATCGCACAAGGTGAGTCGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGACAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTAcc                                                                            <  2:3834093/92‑1 (MQ=255)
                         agagACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTc                                                                        >  2:3803452/1‑100 (MQ=255)
                          gagaCATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCg                                                                       >  1:1004263/1‑100 (MQ=255)
                          gagaCATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCg                                                                       >  2:3757594/1‑100 (MQ=255)
                          gagaCATCGCACAAGGTGAGACGAATTGTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGTGCCACAGCCGACATCCAGCACTTTACCTTTCg                                                                       <  2:1437887/100‑1 (MQ=255)
                            gaCATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCgtn                                                                     <  2:1086841/100‑2 (MQ=255)
                            gaCATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCgtg                                                                     <  1:261198/100‑1 (MQ=255)
                              cATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGtgtg                                                                   >  1:2196445/1‑100 (MQ=255)
                               aTCTCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGc                                                                  <  1:1512691/100‑1 (MQ=255)
                                 cGCACAAGGTGAGACGAAATTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCgtgcacg                                                                 >  2:51283/1‑95 (MQ=255)
                                  gCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGa                                                               <  2:3664598/100‑1 (MQ=255)
                                  gCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACATTTCGTGTGCGGa                                                               >  1:515138/1‑100 (MQ=255)
                                   cacaAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAg                                                              >  1:1065266/1‑100 (MQ=255)
                                    acaAGGTGAGACGAATTTTCGGCGAATGTCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCggn                                                               <  1:2422305/98‑2 (MQ=255)
                                    acaAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGt                                                             <  1:1420642/100‑1 (MQ=255)
                                     caAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGtt                                                            >  1:2098623/1‑100 (MQ=255)
                                     caAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGACCTTTACCTTTCGTGTGCGGAg                                                              >  2:1656311/1‑98 (MQ=255)
                                      aaGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTa                                                           <  2:90337/100‑1 (MQ=255)
                                          tGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGt                                                       >  2:3438682/1‑100 (MQ=255)
                                           gagaCGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgccgaaaattcgtctcaccttgtgcgatgtctctgccccggcg                                                      <  2:1655221‑M2/100‑44 (MQ=255)
                                             gaCGAATTTTCGGCGAATGGCGCGCAAAGGCAATTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCga                                                    <  1:660978/100‑1 (MQ=255)
                                             gaCGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATTCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCga                                                    >  1:2754908/1‑100 (MQ=255)
                                             gaCGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCga                                                    >  1:1823820/1‑100 (MQ=255)
                                             gaCGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCga                                                    >  2:3645711/1‑100 (MQ=255)
                                             gaCGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCga                                                    >  2:3897684/1‑100 (MQ=255)
                                              aCGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCgag                                                   <  1:922757/100‑1 (MQ=255)
                                               cGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCgaga                                                  >  1:2226857/1‑100 (MQ=255)
                                                  aTTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgccgaaaattcgtctcaacttgtgcgatgtctctgccccggcggtagaag                                               <  2:3681968‑M2/100‑51 (MQ=255)
                                                   ttttCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGagcag                                              <  1:386348/100‑1 (MQ=255)
                                                   ttttCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGagcag                                              <  1:94757/100‑1 (MQ=255)
                                                   ttttCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGagca                                               <  2:3859685/99‑1 (MQ=255)
                                                       cGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCTCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAAc                                          <  1:983865/100‑1 (MQ=255)
                                                        ggCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACt                                         >  2:1520690/1‑100 (MQ=255)
                                                        ggCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACt                                         <  2:2171016/100‑1 (MQ=255)
                                                         gCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTg                                        <  1:1631766/100‑1 (MQ=255)
                                                          cGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgccgaaaattcgtctcaccttgtgcgatgtctctgccccggcggtagaagccagccgc                                       <  1:1230103‑M2/100‑59 (MQ=255)
                                                          cGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTgg                                       <  2:705357/100‑1 (MQ=255)
                                                          cGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTgg                                       <  1:2849556/100‑1 (MQ=255)
                                                           gAATGGCGCGCAAAGTCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTTTGCGTAGTTAATGTCGAGAGCAGCAACTGGc                                      <  2:406191/100‑1 (MQ=255)
                                                           gAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGc                                      <  2:1903375/100‑1 (MQ=255)
                                                           gAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGc                                      <  2:758666/100‑1 (MQ=255)
                                                            aaTGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCt                                     >  2:2870379/1‑100 (MQ=255)
                                                            aaTGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCAAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGc                                      >  1:2328355/1‑99 (MQ=255)
                                                               cttccgatctggCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTAcc                                  <  1:3749206/90‑1 (MQ=255)
                                                                 cgcgcAAAGTTAACTGAAAGCATGCCCGCGCCTCAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCg                                 <  1:2325398/99‑1 (MQ=255)
                                                                 cgcgcAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGa                                <  2:2426038/100‑1 (MQ=255)
                                                                  gcgcAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGAc                               >  1:1307011/1‑100 (MQ=255)
                                                                   cgcAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACa                              <  1:410346/100‑1 (MQ=255)
                                                                    gcAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTAcc                                  <  2:1787545/95‑1 (MQ=255)
                                                                     cAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATc                            >  1:3500584/1‑100 (MQ=255)
                                                                       aaGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCa                          <  1:254089/100‑1 (MQ=255)
                                                                         ggCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGa                        >  1:1335655/1‑100 (MQ=255)
                                                                         ggCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGa                        <  2:2984817/100‑1 (MQ=255)
                                                                           cAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGAcc                      >  1:3099289/1‑100 (MQ=255)
                                                                           cAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGCGCGCAGTTAACGTCGAGAGCAGCAACTGCCTACCGACACCCAAAcc                      >  2:3710635/1‑100 (MQ=255)
                                                                             aCTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGt                    >  2:436981/1‑100 (MQ=255)
                                                                               tGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTc                   >  2:2333016/1‑99 (MQ=255)
                                                                               agataGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTc                   <  1:1595228/95‑1 (MQ=255)
                                                                                gAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTcg                  >  2:2729258/1‑99 (MQ=255)
                                                                                 aaaGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTcgcg                >  2:3182578/1‑100 (MQ=255)
                                                                                  aaGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCgg               >  2:3587386/1‑100 (MQ=255)
                                                                                   aGCACGCCCGCGCCACAGCCGACATCCAGCACTTTCCCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGc              >  1:339843/1‑100 (MQ=255)
                                                                                   aGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGc              <  2:1625738/100‑1 (MQ=255)
                                                                                     cACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCTGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTa            <  1:2981421/100‑1 (MQ=255)
                                                                                     cACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTa            >  2:19993/1‑100 (MQ=255)
                                                                                     cACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTa            >  1:2294822/1‑100 (MQ=255)
                                                                                       cGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTaaa          >  1:1999868/1‑100 (MQ=255)
                                                                                        gCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTAAac         <  2:3258634/100‑1 (MQ=255)
                                                                                         cccGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTAAaca        <  2:3500329/100‑1 (MQ=255)
                                                                                             cgcCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTAAACACGc     >  1:3230260/1‑99 (MQ=255)
                                                                                               ccACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTAAACACGCCAg  <  1:3757633/100‑1 (MQ=255)
                                                                                                   |                                                                                               
CGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTAAACACGCCAG  >  NC_000913/4606989‑4607183

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.