New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4636324 =171 (1.220)8 (0.060) 8/164 NT 5.4% coding (318/690 nt) creB response regulator in two‑component regulatory system with CreC
?NC_000913 4636375 = 125 (0.970)coding (369/690 nt) creB response regulator in two‑component regulatory system with CreC
Rejected: Frequency below cutoff threshold.

Only 100 of 184 total aligned reads displayed.

CCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGA  >  NC_000913/4636276‑4636472
                                                                                                   |                                                                                                 
ccTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTgaag                                                                                                   <  2:2181851/100‑1 (MQ=255)
ccTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTgaag                                                                                                   <  2:3491982/100‑1 (MQ=255)
  ttcaaaatgtccaatacggatgactggagacggcgtcgagaacttcTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTgaagaa                                                                                                 >  1:357534‑M1/47‑100 (MQ=255)
   gCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTgaaga                                                                                                  <  1:2725216/98‑1 (MQ=255)
   gCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGaagaag                                                                                                <  2:3595892/100‑1 (MQ=255)
   gCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGaagaag                                                                                                <  2:2007527/100‑1 (MQ=255)
   gCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTACGCCAAGGTGCGCACCTTACTGCGTCGGGTGaagaag                                                                                                >  1:1648745/1‑100 (MQ=255)
     ttGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGtt                                                                                              >  1:1116462/1‑100 (MQ=255)
       gggCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTtct                                                                                            <  2:472469/100‑1 (MQ=255)
         gCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCg                                                                                          <  1:3365354/100‑1 (MQ=255)
         gCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCg                                                                                          <  1:3757417/100‑1 (MQ=255)
         gCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCg                                                                                          >  1:2172445/1‑100 (MQ=255)
         gCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCg                                                                                          >  1:1447079/1‑100 (MQ=255)
          cTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGa                                                                                         <  1:1853271/100‑1 (MQ=255)
           tGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGAc                                                                                        <  1:757478/100‑1 (MQ=255)
           tGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGAc                                                                                        <  2:1815224/100‑1 (MQ=255)
            ggAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACg                                                                                       <  1:933409/100‑1 (MQ=255)
             ttccgatctGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGc                                                                                      <  1:4914/92‑1 (MQ=255)
             gAAATTGGTGCTGACGACTACGTGGCTAAACAGTTTTCTCCCCGCGAAGTGTGCGCCAGGGTGGGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGc                                                                                      <  1:3344842/100‑1 (MQ=255)
              aaaTTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGcc                                                                                     >  2:2723121/1‑100 (MQ=255)
               aaTTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTACGCCAGAGTGCGCACCTAACTGCGTCGGGAGAAGAAGTTCTCGACGCCg                                                                                    >  1:132899/1‑100 (MQ=255)
                 ttGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGtc                                                                                  >  2:2224319/1‑100 (MQ=255)
                   ggTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGtctc                                                                                <  2:228053/100‑1 (MQ=255)
                   ggTGCTGACGACTACGTGGCTAAACCG‑TTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTcc                                                                               <  1:2694690/100‑1 (MQ=255)
                    gTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTcc                                                                               >  2:1458218/1‑100 (MQ=255)
                     tGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTcca                                                                              >  2:1592418/1‑99 (MQ=255)
                      gCTGACGACTACGTGGCTAAACCGTTTTCACCCCTCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCg                                                                             <  2:456052/100‑1 (MQ=255)
                       cTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGt                                                                            <  2:134428/100‑1 (MQ=255)
                        tGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTc                                                                           >  1:449662/1‑100 (MQ=255)
                         gacgacTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCa                                                                          >  2:262220/1‑100 (MQ=255)
                           cgacTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATc                                                                        >  1:70602/1‑100 (MQ=255)
                           cgacTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATc                                                                        <  1:3500407/100‑1 (MQ=255)
                                  gTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTg                                                                 <  2:1845279/100‑1 (MQ=255)
                                  gTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTg                                                                 <  2:1949163/100‑1 (MQ=255)
                                   tGGCTAAACCGTTTTCACCCCGCGAAGTGTGTGCCAGTGTGCGTACCTTAATGTGTCGGGTTAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTgg                                                                <  1:1376968/100‑1 (MQ=255)
                                   tGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGTCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTgg                                                                <  2:746933/100‑1 (MQ=255)
                                   tGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTgg                                                                <  1:3603313/100‑1 (MQ=255)
                                   tGGCTAAACCGTTGTCACTCGGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTgg                                                                <  2:3414586/100‑1 (MQ=255)
                                    ggCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGa                                                               >  1:1110325/1‑100 (MQ=255)
                                    ggCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGa                                                               <  2:1662160/100‑1 (MQ=255)
                                     gCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGAc                                                              <  2:55912/100‑1 (MQ=255)
                                      cgagaacttcttcacccgacgcagtaaggtgcgcaccctggcgcacacttcgcggggtgaaGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACa                                                             >  1:246684‑M2/62‑100 (MQ=255)
                                      cTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACa                                                             >  1:3891660/1‑100 (MQ=255)
                                      cTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACa                                                             >  2:3813189/1‑100 (MQ=255)
                                      cTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACa                                                             >  1:3092835/1‑100 (MQ=255)
                                        aaaCCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACAtt                                                           >  2:2822835/1‑100 (MQ=255)
                                         aaCCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACAttt                                                          >  1:1752591/1‑100 (MQ=255)
                                          aCCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACAtttt                                                         >  2:3866964/1‑100 (MQ=255)
                                           ccGTATTCAACCCGCGAAGTGTGCGCCCGGGTGCGAACCTTACTGCGTCCGGTGAAGAAGTTCTCGACGCCGGCTCCCGTCATCCGTGTTGGACATTttg                                                        <  2:3672985/100‑1 (MQ=255)
                                           acttcttcacccgacgcagtaaggtgcgcaccctggcgcacacttcgcggggtgaaGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttg                                                        >  2:3906149‑M2/57‑100 (MQ=255)
                                            cttcttcacccgacgcagtaacgtgcgcaccctggcgcacacttcgcggggtgaaGAAGTTCTCGTCGCCGTCTCCCGTCACCCGTATTGGAcattgt                                                         >  2:312329‑M2/56‑96 (MQ=255)
                                            cGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttga                                                       <  1:283787/100‑1 (MQ=255)
                                              ttttCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaat                                                     <  2:153485/100‑1 (MQ=255)
                                              ttttCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaat                                                     >  1:2471025/1‑100 (MQ=255)
                                              tcttcacccgacgcagtaaggtgcgcaccctggcgcacacttcgcggggtgaaGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaat                                                     >  2:2244781‑M2/54‑100 (MQ=255)
                                                 tcacccgacgcagtaaggtgcgcaccctggcgcacacttcgcggggtgaaGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaattga                                                  >  2:186977‑M2/51‑100 (MQ=255)
                                                  CACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaattgaa                                                 >  2:3405743‑M1/1‑100 (MQ=255)
                                                   atcttgctaaGTGTGCGCCAGGTTGCGCACCTTACTGTGTCGGGTGAAGAAGTTCTCGACGGCGTCTCCCGTCATCCGTATTGGACATTTtgaattgaat                                                <  1:2221634/92‑1 (MQ=255)
                                                   ACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTtgaattgaat                                                <  2:1950455‑M1/100‑1 (MQ=255)
                                                   ACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTATCGAAGCAGACTCCCGTCATCCGTATTGGACATTTtgaattgaat                                                <  1:104819‑M1/100‑1 (MQ=255)
                                                    CCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGACGTCTCCCGTCATCCGTATTGGACATTTTGAATtgaatg                                               <  2:1289540‑M1/100‑1 (MQ=255)
                                                     cccGCGAAGTGTGCGTCAGTGTGTGCACCTTATTGCGTCTTGTGAAGAAGTTCTTGTCGCCGTCTCCCGTTATCCGTTTTGGACATTTtgaattgaat                                                <  2:912107/98‑1 (MQ=255)
                                                     CCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATtgaatga                                              <  1:1875734‑M1/100‑1 (MQ=255)
                                                      cgacgcagtaaggtgcgcaccctggcgcacacttcgcggggtgaaGAAGTTCTCGACGCCATCTCCCGTCACCCGTATTAGACATTTTGAATtgaatgaa                                             >  1:716838‑M2/46‑100 (MQ=255)
                                                      CCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATtgaatgaa                                             <  1:750517‑M1/100‑1 (MQ=255)
                                                                tgCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGgcgc                                   <  1:2495083/100‑1 (MQ=255)
                                                                  cgcCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAg                                 <  2:1116451/100‑1 (MQ=255)
                                                                      aGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCa                             <  2:2210333/100‑1 (MQ=255)
                                                                      aGGGTGCGCACCTTACTGCATCGGGTGAAGAAGTTCTCGACTCCGTCTCCCGTCATCCGTATCGGACATTATGAATTGAATAAACCCGCGGCGCAGATCa                             >  2:949701/1‑100 (MQ=255)
                                                                       gggTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAg                            >  2:887054/1‑100 (MQ=255)
                                                                       gggTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAg                            <  1:3411059/100‑1 (MQ=255)
                                                                        ggTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATACGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATAAGc                           >  1:887223/1‑100 (MQ=255)
                                                                          tGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTg                         >  2:2778742/1‑100 (MQ=255)
                                                                           gcgcACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTgg                        <  2:1310046/100‑1 (MQ=255)
                                                                           gcgcACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTgg                        <  2:2411280/100‑1 (MQ=255)
                                                                            cgcACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGt                       <  2:2946130/100‑1 (MQ=255)
                                                                              caacTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGttt                     <  1:1061225/97‑1 (MQ=255)
                                                                                 cTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGac                  <  2:2502164/100‑1 (MQ=255)
                                                                                 cTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGac                  <  1:2443827/100‑1 (MQ=255)
                                                                                 cTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGac                  <  2:3138842/100‑1 (MQ=255)
                                                                                  ttatggCGTCGTGTGAAGAAGTTCTCTGCGCCGTCTCCCGTCTTCCTTATTGGACATTTTGAATTGAGTGATCCCGCGGCGCAGATCAGCTGGTTTGaga                 <  2:1375548/95‑3 (MQ=255)
                                                                                  ttACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTTTCCCGTCATCTGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGaca                 <  1:1293081/100‑1 (MQ=255)
                                                                                  ttACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGaca                 <  1:135196/100‑1 (MQ=255)
                                                                                    aCTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCTCAGATCAGCTGGTTTGACACg               <  2:171942/100‑1 (MQ=255)
                                                                                     cTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTGTGACACg               <  2:3277251/99‑1 (MQ=255)
                                                                                      tGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGcc             <  1:1621896/100‑1 (MQ=255)
                                                                                        cGTCGGGTGAAGAAGTTCTCGACGTCGTCTCCCGTCATCCGTATTGGACATTTTGATTTGAATTAACCCGCGGCGCAGATCAGCTGGTTTGacac                <  2:2482328/95‑1 (MQ=255)
                                                                                        cGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCAt           <  2:3092807/100‑1 (MQ=255)
                                                                                        cGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCAt           >  1:189706/1‑100 (MQ=255)
                                                                                         gTCGTGTGAAGAACTTCTCGACGCCTGCTCCCGTCATCCGTATTGGACATTTTGAATTGAATTACCCCGCGGCGCAGATCAGCTGGTTTGACACGCCa            <  2:1929041/98‑1 (MQ=255)
                                                                                         gTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCAtt          >  1:1963216/1‑100 (MQ=255)
                                                                                           ggggtgaaGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAg        <  2:246679‑M2/92‑1 (MQ=255)
                                                                                           cGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAg        <  1:2145181/100‑1 (MQ=255)
                                                                                            gggtgaaGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAgc       <  2:2493816‑M2/93‑1 (MQ=255)
                                                                                             ggtgaaGCAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCCGGTTTGACACGCCATTAgc       >  2:1082002‑M2/7‑99 (MQ=255)
                                                                                              gtgaaGAAGTTCTCGACGCCTTCTCCCGTCATTCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAgcgc     <  1:1252207‑M2/95‑1 (MQ=255)
                                                                                               tgaaGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCt    <  2:3629617‑M2/96‑1 (MQ=255)
                                                                                                gaaGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTg   <  1:2928818‑M2/97‑1 (MQ=255)
                                                                                                gaaGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTg   >  1:1244892‑M2/4‑100 (MQ=255)
                                                                                                 aaGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGTACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGa  <  1:1639519‑M2/98‑1 (MQ=255)
                                                                                                   |                                                                                                 
CCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGA  >  NC_000913/4636276‑4636472

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.