BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	72136 =	NA (NA)	11 (0.090)	5/164	NT	NA	noncoding (1/85 nt)	REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	411111 =	NA (NA)	11 (0.090)	5/164	NT	NA	noncoding (34/191 nt)	REP35 (repetitive extragenic palindromic) element; contains 4 REP sequences	REP35 (repetitive extragenic palindromic) element; contains 4 REP sequences

Only 100 of 199 total aligned reads displayed.

GCGGCGTACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAG  >  NC_000913/411012‑411210

gcggcgTACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGcc                                                                                                       <  2:1388694/100‑1 (MQ=255)

  ggcgTACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTa                                                                                                     >  2:3298627/1‑100 (MQ=255)

  ggcgTACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTa                                                                                                     >  1:2011937/1‑100 (MQ=255)

   gcgTACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTAc                                                                                                    >  2:3892894/1‑100 (MQ=255)

   gcgTACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTAc                                                                                                    <  1:2381335/100‑1 (MQ=255)

      tACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACaaa                                                                                                 <  1:166284/100‑1 (MQ=255)

       aCGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCACGTCTTATCAGGCCTACaaaa                                                                                                >  1:919072/1‑100 (MQ=255)

       aCGCGACGCTGCGTGGTTATGGCCACAATAGTAAAAAACGTAGGAAATTGGCGCATCATGCCTGATGAGACGCTTGCCGCGTCTTATCAGGCCTACaa                                                                                                  <  2:2718842/98‑1 (MQ=37)

        cgtggcgCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAg                                                                                               <  1:1149432/97‑1 (MQ=255)

        cgcgGCGCTGCGTGGTTATGGCCACAAGAGTAAAATACGTAGGCAATTNGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACaaaan                                                                                               <  1:1855896/100‑2 (MQ=255)

        cgcgGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCTCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAg                                                                                               <  2:1200135/100‑1 (MQ=255)

        cgcgGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACaaaa                                                                                                >  2:849480/1‑99 (MQ=255)

         gcggcgCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAgg                                                                                              <  1:3890880/100‑1 (MQ=255)

          cggcgCTGCGTGGTTATGGCCACAAGAGTAAAAATCGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACaaaggtg                                                                                             <  1:138886/100‑5 (MQ=255)

           ggtgcTGCGTGGTTATGGCCACAATAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCTCGTCTTATCAAGCCTACAAAAGGTg                                                                                            <  2:1328911/97‑1 (MQ=37)

           ggcgCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTg                                                                                            >  1:3727831/1‑100 (MQ=255)

            gcgcTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATACGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGc                                                                                           >  1:3454717/1‑100 (MQ=255)

              gcTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCa                                                                                         <  1:1677311/100‑1 (MQ=255)

              gcTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCa                                                                                         <  2:2029553/100‑1 (MQ=255)

                tGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGa                                                                                       >  1:1979195/1‑100 (MQ=255)

                 gCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGaa                                                                                      >  2:2583592/1‑100 (MQ=255)

                  cGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAc                                                                                     >  1:3426404/1‑100 (MQ=255)

                    tGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑Cg                                                                                 >  1:2272729/1‑100 (MQ=255)

                    tGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑Cg                                                                                 <  2:3031441/100‑1 (MQ=255)

                       ttATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAg                                                                              <  2:2152556/100‑1 (MQ=255)

                           ggCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCg                                                                          >  1:540690/1‑100 (MQ=255)

                             ccACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGa                                                                        >  1:1540378/1‑100 (MQ=255)

                             ccACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGa                                                                        >  2:3505287/1‑100 (MQ=255)

                              cacaNGANTAAAAAAAGTAGGCAATGGGCGCATCATGCCTGATGCGACGCTTGGNGGGTCTTATCAGGCCTACAAAAGATGCCAGaaacctgng                                                                               >  2:287807/1‑87 (MQ=21)

                              cacaAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGATGCCAGAAC‑‑ACTAGACCGGa                                                                        >  2:742223/1‑99 (MQ=25)

                               acaAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATa                                                                      <  2:2810785/100‑1 (MQ=255)

                                 aaGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAg                                                                    <  2:364568/100‑1 (MQ=255)

                                 aaGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAg                                                                    <  1:3442615/100‑1 (MQ=255)

                                  agagTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAgg                                                                   >  1:2197225/1‑100 (MQ=255)

                                    agTAAAAAACGTAGGCAATTGGCGCATCATGCTTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGc                                                                  <  1:2614815/99‑1 (MQ=255)

                                     gTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAggaga                                                                >  2:2946314/1‑97 (MQ=255)

                                     gTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGt                                                                <  1:2418695/100‑1 (MQ=255)

                                     gTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CATAGGCCGGATAAGGCg                                                                 >  2:3794510/1‑99 (MQ=255)

                                      tAAAAAACGTAGGCAATTGGTGTTTTATGTTTGATGTGTCGTTTGCCGGGTCTTAGCGGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGc                                                                  <  1:2125137/97‑1 (MQ=21)

                                       aaaaaaCGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTc                                                              >  1:1784097/1‑100 (MQ=255)

                                       aaaaaaCGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CATAGGCCGGATAAGGCGTTc                                                              >  1:42924/1‑100 (MQ=255)

                                         aaaaCGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATagatcggaaga                                                            >  2:1666309/1‑90 (MQ=255)

                                             cGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCAcgccg                                                        <  2:121358/100‑1 (MQ=255)

                                                aGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCCCGTCTTATTAGGCCTACAAAAAGTAACACAAC‑‑CATAAGCCTGATAAGACGTTTACGCCCCAt                                                     >  1:355990/1‑100 (MQ=18)

                                                  gCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATcc                                                   >  1:665397/1‑100 (MQ=255)

                                                  gCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATcc                                                   >  1:874362/1‑100 (MQ=255)

                                                   cAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGGCGGATAAGGCGTTCACGCCGCATCCg                                                  >  2:1773584/1‑100 (MQ=255)

                                                   cAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATcc                                                   >  2:3926094/1‑99 (MQ=255)

                                                   cAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCg                                                  <  1:3172722/100‑1 (MQ=255)

                                                    aaTTGGCGTATCATGCCTGATGCGACGCTTGCCGCGTCTTATCCGGCCTCCAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATGCGGCGTGAACGCCTTATCCgg                                                 <  2:370745/100‑1 (MQ=18)

                                                    aaTTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACACCGCATCCgg                                                 >  2:2562156/1‑100 (MQ=255)

                                                     aTTGGCGCATCATGCCTTATGTGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGc                                                <  1:2557497/100‑1 (MQ=255)

                                                     aTTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGc                                                <  2:2241993/100‑1 (MQ=255)

                                                     aTTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGc                                                <  2:1610024/100‑1 (MQ=255)

                                                        ggCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAt                                             <  2:1991725/100‑1 (MQ=255)

                                                        ggCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAt                                             >  1:1906401/1‑100 (MQ=255)

                                                           gcATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAg                                          >  2:3423113/1‑100 (MQ=255)

                                                             atcatGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTg                                        <  1:1313373/100‑1 (MQ=255)

                                                              tcatGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGc                                       <  1:888257/100‑1 (MQ=255)

                                                              gtaggcctgataagacgcggcaagcgtcgcatcaggcCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGc                                       >  1:456317‑M2/38‑100 (MQ=255)

                                                               catGCCTGATTCGACGCTTGCCGCGTCTTATCAGTCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCt                                      <  1:280012/100‑1 (MQ=255)

                                                               catGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCt                                      <  1:3661388/100‑1 (MQ=255)

                                                               caggcctgataagacgcggcaagcgtcgcatcaggcCTGCAAAATGTGCCAGAACCGCGTAGGGCGGATAAGGCGTTCACGCCGCATCCGGCAATAAgta                                        >  1:3151162‑M2/37‑99 (MQ=255)

                                                                 ggcctgataagacgcggcaagcgtcgcatcaggcCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGc                                       >  1:2900368‑M2/35‑97 (MQ=255)

                                                                 ggcctgataagacgcggcaagcgtcacatcaggcCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTcc                                    >  1:3515003‑M2/35‑100 (MQ=255)

                                                                   cctgataagacgcggcaagcgtcgcatcaggcCTACAAAAGGTGCCAGAAC‑‑CGTAAGCCGGATAAAGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGa                                  >  1:1269370‑M2/33‑100 (MQ=255)

                                                                   ccTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAATGCTCCGa                                  >  2:2111649/1‑100 (MQ=255)

                                                                       aTGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCTTTCACGCCGCTTCCGGCAATAAGTGCTCCGATGcc                              <  2:1534086/100‑1 (MQ=255)

                                                                        tGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCt                             <  2:615299/100‑1 (MQ=255)

                                                                        tGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCt                             <  2:150612/100‑1 (MQ=255)

                                                                         gCGACGCTTGCCGCGTCTTATCAGGCTTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTg                            <  1:3315173/100‑1 (MQ=255)

                                                                         gCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCt                             >  2:3710525/1‑99 (MQ=255)

                                                                         gCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTACGATGCCTg                            >  2:698680/1‑100 (MQ=255)

                                                                          cGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGa                           >  2:3350575/1‑100 (MQ=255)

                                                                          cGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGa                           >  1:2212617/1‑100 (MQ=255)

                                                                          cGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGa                           >  1:1613380/1‑100 (MQ=255)

                                                                          cGACGCTTGCCGCGTCATATCAACCCTACAAAAGGTGCCAGAAC‑‑CGTAAGCCAAATAAGACGTTCACGCGGCAGCCGCCAATAAGTGCTCCGATGCCTGa                           >  2:2273525/1‑100 (MQ=21)

                                                                             cGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGc                        >  1:2729579/1‑100 (MQ=255)

                                                                             cGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGc                        <  2:1526929/100‑1 (MQ=255)

                                                                             cGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGc                        <  1:1587178/100‑1 (MQ=255)

                                                                              gatttccGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGc                        <  1:1280008/94‑1 (MQ=255)

                                                                                 tGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACg                    >  2:518170/1‑100 (MQ=255)

                                                                                 tGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACg                    >  2:1129724/1‑100 (MQ=255)

                                                                                  gCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGc                   >  1:2214675/1‑100 (MQ=255)

                                                                                    cgcgTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCtt                 >  2:3201867/1‑100 (MQ=255)

                                                                                          ttATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCcgcg           <  1:756193/100‑1 (MQ=255)

                                                                                           tATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGt          >  1:1078950/1‑100 (MQ=255)

                                                                                           tATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGt          >  1:2949799/1‑100 (MQ=255)

                                                                                            atcaggcCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCcgcg           >  2:448114‑M2/8‑98 (MQ=255)

                                                                                            atcaggcCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTc         >  2:3933293‑M2/8‑100 (MQ=255)

                                                                                            atcaggcCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTc         <  1:2062515‑M2/93‑1 (MQ=255)

                                                                                             tcaggcCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCt        >  1:3104846‑M2/7‑100 (MQ=255)

                                                                                             tcaggcCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCt        <  2:474209‑M2/94‑1 (MQ=255)

                                                                                             tcaggcCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCt        <  1:3797452‑M2/94‑1 (MQ=255)

                                                                                             tCAGGTCTACAAAAGTTGGCAGAAC‑‑TGTATGCCTGTTAAGGCGTTCATGCCGAATGCGGCAATAAGGGCCCCGATGCCTGATGCGACGCTTGCCGCGTc         <  1:3259492/99‑1 (MQ=18)

                                                                                               aggcCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTa      >  2:233279‑M2/5‑100 (MQ=255)

                                                                                                ggcCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCatat     >  2:1979148‑M2/4‑100 (MQ=255)

                                                                                                ggcCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTAt     >  1:602198‑M2/4‑100 (MQ=255)

                                                                                                 gcCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATc    <  2:3433032‑M2/98‑1 (MQ=255)

                                                                                                   cTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAg  >  1:842811/1‑100 (MQ=255)

GCGGCGTACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAG  >  NC_000913/411012‑411210

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.