New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 225544NA (NA)17 (0.130) 9/170 NT NA noncoding (45/76 nt) alaV tRNA‑Ala
?NC_000913 = 225567 NA (NA)noncoding (68/76 nt) alaV tRNA‑Ala

Only 100 of 134 total aligned reads displayed.

ACTACATGTTATGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGA  >  NC_000913/225488‑225666
                                                                               |                                                                                                    
aCTACATGTTATGGGGCTATAGCTCAGCTGGGAGAGCGCCTTCTTTGCACGCAGGAGGTCTGCGGTTCGATACCGCATAGCTCCACCATCTCTGTAGTgg                                                                                  >  1:3057545/1‑100 (MQ=2)
aCTACATGTTATGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTCTAGTgg                                                                                  >  1:3818116/1‑100 (MQ=11)
 cTACATGTTATGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGt                                                                                 >  1:3255591/1‑100 (MQ=31)
  tACATGTTATGGGGCTATAGCTCAGCTGGGAGATCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGGAGTGGt                                                                                 <  2:690922/99‑1 (MQ=9)
  tACATGTTATGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGtt                                                                                <  1:3422420/100‑1 (MQ=32)
  tACATGTTATGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGtt                                                                                <  2:469044/100‑1 (MQ=32)
  tACATGTTATGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGtt                                                                                >  2:3133215/1‑100 (MQ=32)
   aCATGTTATGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTta                                                                               >  1:500376/1‑100 (MQ=33)
    cATGTTATGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTtaa                                                                              <  1:2795178/100‑1 (MQ=32)
     aTGTTATGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTtaaa                                                                             <  1:606031/100‑1 (MQ=33)
      tGTTATGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTtaaat                                                                            >  1:908255/1‑100 (MQ=32)
      tGTTATGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTCCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCAACCATATCTGTAGTGGTtaaat                                                                            >  1:716062/1‑100 (MQ=255)
      tGTTATGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTCTGCACGCAGGAGGTCTGCGTTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTtaaat                                                                            <  2:2127586/100‑1 (MQ=16)
       gTTATGGGGCTATAGCTCAGCTTGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTtaaata                                                                          <  1:378242/100‑1 (MQ=18)
       gTTATGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTtaaata                                                                          >  1:3001684/1‑100 (MQ=33)
        ttATGGAGCCATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGAACCCGCATAGCTCCACCATCTCTGTAGTGGTtaaataa                                                                         <  2:3579777/100‑1 (MQ=255)
          aTGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATaaaa                                                                       <  1:2621838/100‑1 (MQ=33)
           tGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATaaaaa                                                                      <  1:2426982/100‑1 (MQ=33)
            ggggCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATaaaaa                                                                      >  2:1946908/1‑99 (MQ=32)
            ggggCTATAGCTCAGCTGGGAGAGCGACTGCTTTGCACGCAGGAGGTCTGCGGGTCGATCCCGCATAGCTACACCATCTCTGTAGTGGTTAAATaaaa                                                                       >  2:2675458/1‑98 (MQ=11)
            ggggCTATAGCTCAGCTAGGAGAGCGCCTGCATTGCACACAGGAGGTCTGCGGTTAGATCCCGCATAGCTCCACCATCTATGTAGTGGGTAAATaaaaaa                                                                     >  2:3783457/1‑100 (MQ=11)
             gggCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAAt                                                                    >  1:2288079/1‑100 (MQ=33)
             gggCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAAt                                                                    >  2:662928/1‑100 (MQ=33)
               gCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATAc                                                                  <  1:385471/100‑1 (MQ=33)
                 tataGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACtt                                                                <  1:2344557/100‑1 (MQ=33)
                  ataGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTc                                                               <  1:205548/100‑1 (MQ=33)
                  ataGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTc                                                               <  2:598372/100‑1 (MQ=32)
                   taGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCa                                                              <  1:3621317/100‑1 (MQ=33)
                     gCTCTGCTGGGCGCGCGTCTTCTTCGCACGCACGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCAGTGTAGGGGTTAAATAAAAAATACTACaga                                                            >  2:3136704/1‑100 (MQ=11)
                      cTCAGCTGGGAGAGCGCCTGCTTTGCACGTAGGAGGTCTTCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCagag                                                           <  1:405717/100‑1 (MQ=12)
                      cTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCagag                                                           >  1:1568843/1‑100 (MQ=32)
                      cTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCagag                                                           >  1:1223669/1‑100 (MQ=32)
                      cTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCagag                                                           <  1:3426848/100‑1 (MQ=33)
                        cAGCTGGGAGAGCGCCTGCTTTGCACGCAGGATGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTTTAGTGGTTAAATAAAAAATACTTCAGAgtg                                                         <  2:3014858/100‑1 (MQ=12)
                        cAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAgtg                                                         <  2:2504184/100‑1 (MQ=33)
                        cAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAgtg                                                         >  2:466906/1‑100 (MQ=33)
                          gCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTTTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTa                                                       <  1:1182874/100‑1 (MQ=18)
                          gCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTa                                                       >  1:3881698/1‑100 (MQ=32)
                          gCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTa                                                       >  1:1019733/1‑100 (MQ=32)
                          gCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCCCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTa                                                       >  2:2436335/1‑100 (MQ=17)
                           cTGGGAGAGCGCCTGGTTTGCACGAAGGAGGTCTTCGTTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTAc                                                      <  2:1665416/100‑1 (MQ=11)
                            tGGGAGAGCGCCTGCTTTGCACGTTGTTTTTTTGTGGTTTGTTTTTGTATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTAc                                                      <  1:2091356/99‑1 (MQ=2)
                            tGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTAcc                                                     >  2:715462/1‑100 (MQ=32)
                             gggAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCt                                                    >  2:1389645/1‑100 (MQ=32)
                              ggAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCCGAGTGTACCTg                                                   <  2:2045087/100‑1 (MQ=18)
                               gagaGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGc                                                  <  2:1807330/100‑1 (MQ=32)
                               gagaGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGc                                                  >  1:1025868/1‑100 (MQ=32)
                                    cgcCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAgg                                             <  1:2256846/100‑1 (MQ=33)
                                    cgcCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAgg                                             <  1:978793/100‑1 (MQ=32)
                                     gcCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGt                                            >  1:1799486/1‑100 (MQ=32)
                                     gcCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGt                                            >  2:1200108/1‑100 (MQ=33)
                                      ccTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTTTACCTGCaa                                                >  2:3618191/1‑95 (MQ=17)
                                      ccTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGtt                                           >  1:2415144/1‑100 (MQ=32)
                                       cTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTc                                          <  1:662936/100‑1 (MQ=33)
                                       cTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTc                                          >  1:1091772/1‑100 (MQ=32)
                                        tgcgtgcaaagCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCa                                         >  1:3447710/11‑100 (MQ=255)
                                         gCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCAc                                        >  1:1297989/1‑100 (MQ=32)
                                           tttGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTg                                      <  1:3676066/100‑1 (MQ=33)
                                             tGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCg                                    <  2:1980432/100‑1 (MQ=32)
                                             tGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCg                                    <  2:2066211/100‑1 (MQ=33)
                                             tGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTATGTAGTAGTTAAATAAAAAATTCTTCAGAGTGTACCTGCAAAGGTTCACTGc                                     <  2:3805045/99‑1 (MQ=255)
                                               cACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGaa                                  >  1:3138866/1‑100 (MQ=32)
                                               cACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGaa                                  <  1:2669244/100‑1 (MQ=33)
                                               cACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGaa                                  >  2:2220494/1‑100 (MQ=33)
                                               cACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGaa                                  >  1:1379842/1‑100 (MQ=32)
                                               cACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGaa                                  >  1:1276880/1‑100 (MQ=32)
                                                aCGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAg                                 >  1:1832407/1‑100 (MQ=32)
                                                aCGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAg                                 >  1:2289366/1‑100 (MQ=32)
                                                aCGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAg                                 >  1:1141734/1‑100 (MQ=32)
                                                 cGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGt                                >  1:3442795/1‑100 (MQ=32)
                                                 cGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGt                                >  1:1616748/1‑100 (MQ=32)
                                                 cGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGt                                >  1:1897112/1‑100 (MQ=33)
                                                 cGCAGGAGGTCTGCGGTTCGATCCAGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGt                                >  2:3403188/1‑100 (MQ=17)
                                                    aggaggTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGtttt                             >  2:1813820/1‑100 (MQ=32)
                                                    aggaggTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGtttt                             >  1:3698401/1‑100 (MQ=33)
                                                    aggaggTCTGCGGTTCGATCACGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGtttt                             <  2:1297975/100‑1 (MQ=18)
                                                     ggaggTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTg                            <  2:3881659/100‑1 (MQ=33)
                                                     ggaggTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTg                            <  1:3814790/100‑1 (MQ=33)
                                                       aggTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGct                          <  1:2910808/100‑1 (MQ=32)
                                                        ggTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGctc                         >  2:171769/1‑100 (MQ=33)
                                                          tCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCtt                       <  1:952366/100‑1 (MQ=33)
                                                          tCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCtt                       <  1:1842736/100‑1 (MQ=33)
                                                               ngTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTaaaa                  >  1:3804126/2‑100 (MQ=17)
                                                                gTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTaaaaa                 >  2:2470502/1‑100 (MQ=33)
                                                                gTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTaaaaa                 >  2:1127700/1‑100 (MQ=32)
                                                                  tCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTTACTGCGAAGTTTTGCTCTTTAAAAATc               <  2:411074/100‑1 (MQ=18)
                                                                    gATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTg             <  1:669428/100‑1 (MQ=33)
                                                                    gATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTg             <  1:768291/100‑1 (MQ=32)
                                                                    gATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTg             >  1:1522857/1‑100 (MQ=32)
                                                                     aTCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCt              >  1:3792690/1‑98 (MQ=33)
                                                                     aTCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTgg            <  2:426313/100‑1 (MQ=33)
                                                                      tCCCGCATAGCTCTACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTg             <  1:768502/98‑1 (MQ=17)
                                                                      tCCCCCATAGCTCCACAATAACAGAAGTGGTTAAATAAAAAATACATCAGAGTGAACCTACAAAGGTTCAATGAGAAGTTTTGCTCTTTAAAAATCTGGa           >  2:2222316/1‑100 (MQ=11)
                                                                       cccGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGAt          >  2:3860926/1‑100 (MQ=33)
                                                                         cGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCa        <  2:1568828/100‑1 (MQ=33)
                                                                          gCATAGCTCCACCATCTCAGTAGTGGTTAAATAAAAAATACTTCACAGTGTAACTGCAAAGGTTCACTGCGACGTAATGCTCTTTCAAAATCTTGAGCaa       >  2:2588366/1‑100 (MQ=11)
                                                                             tAGGTCCACCATCTCTATAATGGTTAAATAAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGc     <  2:252341/100‑1 (MQ=11)
                                                                             tAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCt    <  2:3778006/100‑1 (MQ=33)
                                                                               gCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGa  >  2:591680/1‑100 (MQ=33)
                                                                               gCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACATACAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGAATCAAGCTGa  >  1:321582/1‑100 (MQ=255)
                                                                               |                                                                                                    
ACTACATGTTATGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGA  >  NC_000913/225488‑225666

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.