New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 225544NA (NA)17 (0.130) 9/170 NT NA noncoding (45/76 nt) alaV tRNA‑Ala
?NC_000913 = 225567 NA (NA)noncoding (68/76 nt) alaV tRNA‑Ala

Only 100 of 134 total aligned reads displayed.

ACTACATGTTATGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGA  >  NC_000913/225488‑225666
                                                                               |                                                                                                    
aCTACATGTTATGGGGCTATAGCTCAGCTGGGAGAGCGCCTTCTTTGCACGCAGGAGGTCTGCGGTTCGATACCGCATAGCTCCACCATCTCTGTAGTgg                                                                                  >  1:3057545/1‑100 (MQ=2)
aCTACATGTTATGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTCTAGTgg                                                                                  >  1:3818116/1‑100 (MQ=11)
 cTACATGTTATGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGt                                                                                 >  1:3255591/1‑100 (MQ=31)
  tACATGTTATGGGGCTATAGCTCAGCTGGGAGATCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGGAGTGGt                                                                                 <  2:690922/99‑1 (MQ=9)
  tACATGTTATGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGtt                                                                                <  1:3422420/100‑1 (MQ=32)
  tACATGTTATGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGtt                                                                                <  2:469044/100‑1 (MQ=32)
  tACATGTTATGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGtt                                                                                >  2:3133215/1‑100 (MQ=32)
   aCATGTTATGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTta                                                                               >  1:500376/1‑100 (MQ=33)
    cATGTTATGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTtaa                                                                              <  1:2795178/100‑1 (MQ=32)
     aTGTTATGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTtaaa                                                                             <  1:606031/100‑1 (MQ=33)
      tGTTATGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTtaaat                                                                            >  1:908255/1‑100 (MQ=32)
      tGTTATGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTCCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCAACCATATCTGTAGTGGTtaaat                                                                            >  1:716062/1‑100 (MQ=255)
      tGTTATGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTCTGCACGCAGGAGGTCTGCGTTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTtaaat                                                                            <  2:2127586/100‑1 (MQ=16)
       gTTATGGGGCTATAGCTCAGCTTGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTtaaat‑a                                                                          <  1:378242/100‑1 (MQ=18)
       gTTATGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTtaaat‑a                                                                          >  1:3001684/1‑100 (MQ=33)
        ttATGGAGCCATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGAACCCGCATAGCTCCACCATCTCTGTAGTGGTtaaat‑aa                                                                         <  2:3579777/100‑1 (MQ=255)
          aTGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑aaaa                                                                       <  1:2621838/100‑1 (MQ=33)
           tGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑aaaaa                                                                      <  1:2426982/100‑1 (MQ=33)
            ggggCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑aaaaa                                                                      >  2:1946908/1‑99 (MQ=32)
            ggggCTATAGCTCAGCTGGGAGAGCGACTGCTTTGCACGCAGGAGGTCTGCGGGTCGATCCCGCATAGCTACACCATCTCTGTAGTGGTTAAAT‑aaaa                                                                       >  2:2675458/1‑98 (MQ=11)
            ggggCTATAGCTCAGCTAGGAGAGCGCCTGCATTGCACACAGGAGGTCTGCGGTTAGATCCCGCATAGCTCCACCATCTATGTAGTGGGTAAAT‑aaaaaa                                                                     >  2:3783457/1‑100 (MQ=11)
             gggCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAAt                                                                    >  1:2288079/1‑100 (MQ=33)
             gggCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAAt                                                                    >  2:662928/1‑100 (MQ=33)
               gCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATAc                                                                  <  1:385471/100‑1 (MQ=33)
                 tataGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACtt                                                                <  1:2344557/100‑1 (MQ=33)
                  ataGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTc                                                               <  1:205548/100‑1 (MQ=33)
                  ataGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTc                                                               <  2:598372/100‑1 (MQ=32)
                   taGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCa                                                              <  1:3621317/100‑1 (MQ=33)
                     gCTCTGCTGGGCGCGCGTCTTCTTCGCACGCACGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCAGTGTAGGGGTTAAAT‑AAAAAATACTACaga                                                            >  2:3136704/1‑100 (MQ=11)
                      cTCAGCTGGGAGAGCGCCTGCTTTGCACGTAGGAGGTCTTCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCagag                                                           <  1:405717/100‑1 (MQ=12)
                      cTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCagag                                                           >  1:1568843/1‑100 (MQ=32)
                      cTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCagag                                                           >  1:1223669/1‑100 (MQ=32)
                      cTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCagag                                                           <  1:3426848/100‑1 (MQ=33)
                        cAGCTGGGAGAGCGCCTGCTTTGCACGCAGGATGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTTTAGTGGTTAAAT‑AAAAAATACTTCAGAgtg                                                         <  2:3014858/100‑1 (MQ=12)
                        cAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAgtg                                                         <  2:2504184/100‑1 (MQ=33)
                        cAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAgtg                                                         >  2:466906/1‑100 (MQ=33)
                          gCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTTTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTa                                                       <  1:1182874/100‑1 (MQ=18)
                          gCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTa                                                       >  1:3881698/1‑100 (MQ=32)
                          gCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTa                                                       >  1:1019733/1‑100 (MQ=32)
                          gCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCCCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTa                                                       >  2:2436335/1‑100 (MQ=17)
                           cTGGGAGAGCGCCTGGTTTGCACGAAGGAGGTCTTCGTTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTAc                                                      <  2:1665416/100‑1 (MQ=11)
                            tGGGAGAGCGCCTGCTTTGCACGTTGTTTTTTTGTGGTTTGTTTTTGTATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTAc                                                      <  1:2091356/99‑1 (MQ=2)
                            tGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTAcc                                                     >  2:715462/1‑100 (MQ=32)
                             gggAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCt                                                    >  2:1389645/1‑100 (MQ=32)
                              ggAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCCGAGTGTACCTg                                                   <  2:2045087/100‑1 (MQ=18)
                               gagaGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGc                                                  <  2:1807330/100‑1 (MQ=32)
                               gagaGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGc                                                  >  1:1025868/1‑100 (MQ=32)
                                    cgcCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAgg                                             <  1:2256846/100‑1 (MQ=33)
                                    cgcCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAgg                                             <  1:978793/100‑1 (MQ=32)
                                     gcCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGt                                            >  1:1799486/1‑100 (MQ=32)
                                     gcCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGt                                            >  2:1200108/1‑100 (MQ=33)
                                      ccTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTTTACCTGCaa                                                >  2:3618191/1‑95 (MQ=17)
                                      ccTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGtt                                           >  1:2415144/1‑100 (MQ=32)
                                       cTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTc                                          <  1:662936/100‑1 (MQ=33)
                                       cTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTc                                          >  1:1091772/1‑100 (MQ=32)
                                        tgcgtgcaaagCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCa                                         >  1:3447710/11‑100 (MQ=255)
                                         gCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCAc                                        >  1:1297989/1‑100 (MQ=32)
                                           tttGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTg                                      <  1:3676066/100‑1 (MQ=33)
                                             tGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCg                                    <  2:1980432/100‑1 (MQ=32)
                                             tGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCg                                    <  2:2066211/100‑1 (MQ=33)
                                             tGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTATGTAGTAGTTAAAT‑AAAAAATTCTTCAGAGTGTACCTGCAAAGGTTCACTGc                                     <  2:3805045/99‑1 (MQ=255)
                                               cACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGaa                                  >  1:3138866/1‑100 (MQ=32)
                                               cACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGaa                                  <  1:2669244/100‑1 (MQ=33)
                                               cACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGaa                                  >  2:2220494/1‑100 (MQ=33)
                                               cACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGaa                                  >  1:1379842/1‑100 (MQ=32)
                                               cACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGaa                                  >  1:1276880/1‑100 (MQ=32)
                                                aCGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAg                                 >  1:1832407/1‑100 (MQ=32)
                                                aCGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAg                                 >  1:2289366/1‑100 (MQ=32)
                                                aCGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAg                                 >  1:1141734/1‑100 (MQ=32)
                                                 cGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGt                                >  1:3442795/1‑100 (MQ=32)
                                                 cGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGt                                >  1:1616748/1‑100 (MQ=32)
                                                 cGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGt                                >  1:1897112/1‑100 (MQ=33)
                                                 cGCAGGAGGTCTGCGGTTCGATCCAGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGt                                >  2:3403188/1‑100 (MQ=17)
                                                    aggaggTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGtttt                             >  2:1813820/1‑100 (MQ=32)
                                                    aggaggTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGtttt                             >  1:3698401/1‑100 (MQ=33)
                                                    aggaggTCTGCGGTTCGATCACGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGtttt                             <  2:1297975/100‑1 (MQ=18)
                                                     ggaggTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTg                            <  2:3881659/100‑1 (MQ=33)
                                                     ggaggTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTg                            <  1:3814790/100‑1 (MQ=33)
                                                       aggTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGct                          <  1:2910808/100‑1 (MQ=32)
                                                        ggTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGctc                         >  2:171769/1‑100 (MQ=33)
                                                          tCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCtt                       <  1:952366/100‑1 (MQ=33)
                                                          tCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCtt                       <  1:1842736/100‑1 (MQ=33)
                                                               ngTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTaaaa                  >  1:3804126/2‑100 (MQ=17)
                                                                gTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTaaaaa                 >  2:2470502/1‑100 (MQ=33)
                                                                gTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTaaaaa                 >  2:1127700/1‑100 (MQ=32)
                                                                  tCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTTACTGCGAAGTTTTGCTCTTTAAAAATc               <  2:411074/100‑1 (MQ=18)
                                                                    gATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTg             <  1:669428/100‑1 (MQ=33)
                                                                    gATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTg             <  1:768291/100‑1 (MQ=32)
                                                                    gATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTg             >  1:1522857/1‑100 (MQ=32)
                                                                     aTCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCt              >  1:3792690/1‑98 (MQ=33)
                                                                     aTCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTgg            <  2:426313/100‑1 (MQ=33)
                                                                      tCCCGCATAGCTCTACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTg             <  1:768502/98‑1 (MQ=17)
                                                                      tCCCCCATAGCTCCACAATAACAGAAGTGGTTAAAT‑AAAAAATACATCAGAGTGAACCTACAAAGGTTCAATGAGAAGTTTTGCTCTTTAAAAATCTGGa           >  2:2222316/1‑100 (MQ=11)
                                                                       cccGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGAt          >  2:3860926/1‑100 (MQ=33)
                                                                         cGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCa        <  2:1568828/100‑1 (MQ=33)
                                                                          gCATAGCTCCACCATCTCAGTAGTGGTTAAAT‑AAAAAATACTTCACAGTGTAACTGCAAAGGTTCACTGCGACGTAATGCTCTTTCAAAATCTTGAGCaa       >  2:2588366/1‑100 (MQ=11)
                                                                             tAGGTCCACCATCTCTATAATGGTTAAATAAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGc     <  2:252341/100‑1 (MQ=11)
                                                                             tAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCt    <  2:3778006/100‑1 (MQ=33)
                                                                               gCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGa  >  2:591680/1‑100 (MQ=33)
                                                                               gCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACATACAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGAATCAAGCTGa  >  1:321582/1‑100 (MQ=255)
                                                                               |                                                                                                    
ACTACATGTTATGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGGTTAAAT‑AAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGA  >  NC_000913/225488‑225666

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.