New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2499276101 (0.720)18 (0.140) 10/162 NT 16.3% coding (606/1698 nt) ypdA sensor kinase regulating yhjX; pyruvate‑responsive YpdAB two‑component system
?NC_000913 = 2499293 93 (0.730)coding (623/1698 nt) ypdA sensor kinase regulating yhjX; pyruvate‑responsive YpdAB two‑component system

Only 100 of 133 total aligned reads displayed.

TTCCAATGATCCTCGGTAGCGTCTGTATCGGCTTTATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCGAGTCATTACGCAAGGTCTGCGAAATTATCCGCGATGACATTCACGC  >  NC_000913/2499194‑2499392
                                                                                                   |                                                                                                   
ttCCAATGATCCTCGGTAGCGTCTGTATCGGCTTTATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCt                                                                                                     <  1:1728380/100‑1 (MQ=255)
   cAATGATCCTCGGTAGCGTCTGTATCGGCTTTGTTGTGCTTCTGGTGCAATGCGTTGAGGGCGAAAAAGAGGACAGCGCCGCTAGGCAGGCCAAGCTg                                                                                                    <  1:532673‑M2/98‑2 (MQ=255)
   cAATGATCCTCGGTAGCGTCTGTATCGGCTTTATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCt                                                                                                     >  1:1863634/1‑97 (MQ=255)
   cAATGATCCTCGGTAGCGTCTGTATCGGCTTTATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTggc                                                                                                  >  1:2677463‑M2/1‑97 (MQ=255)
    aaTGATCCTCGGTAGCGTCTGTATCGGCTTTATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTg                                                                                                    <  2:2765580‑M2/97‑2 (MQ=255)
      tGATCCTCGGTAGCGTCTGTATCGGCTTTATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTggcgct                                                                                               <  2:3606230‑M2/100‑7 (MQ=255)
        aTCCTCGGTAGCGTCTGTATCGGCTTTATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTggcgctgg                                                                                             >  1:2081195‑M2/1‑92 (MQ=255)
         tCCTCGGTAGCGTCTGTATCGGCTTTATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTggcgctgg                                                                                             >  1:2036554‑M2/1‑91 (MQ=255)
         tCCTCGGTAGCGTCTGTATCGGCTTTATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGa                                                                                            <  2:261508/100‑1 (MQ=255)
         tCCTCGGTAGCGTCTGTATCGGCTTTATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGa                                                                                            <  1:3261163/100‑1 (MQ=255)
         tCCTCGGTAGCGTCTGTATCGGCTTTATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGa                                                                                            <  1:2158731/100‑1 (MQ=255)
         tCCTCGGTAGCGTCTGTATCGGCTTTATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGa                                                                                            <  2:3313462/100‑1 (MQ=255)
         tCCTCGGTAGCGTCTGTATCGGCTTTATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGa                                                                                            <  1:1094850/100‑1 (MQ=255)
           cTCGGTAGCGTCTGTATCGGCTTTATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGata                                                                                          >  1:3089668/1‑100 (MQ=255)
             cGGTAGCGTCTGTATCGGCTTTATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATc                                                                                        <  1:556919/100‑1 (MQ=255)
               gTAGCGTCTGTATCGGCTTTATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGc                                                                                      <  1:1612781/100‑1 (MQ=255)
                  gCGTCTGTATCGGCTTTATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCcaa                                                                                   <  1:818261/100‑1 (MQ=255)
                   cGTCTGTATCGGCTTTATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCcaac                                                                                  >  2:171960/1‑100 (MQ=255)
                   cGTCTGTATCGGCATTATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCcaac                                                                                  >  1:2662887/1‑100 (MQ=255)
                    gTCTGTATCGGCTTTATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCcaac                                                                                  <  1:731173/99‑1 (MQ=255)
                     tCTGTATCGGCTTTATTTTGCTTCTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCcaaca                                                                                 <  1:1465688/99‑1 (MQ=255)
                       tGTATCGGCTTTATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACaaaa                                                                              >  2:1376263/1‑100 (MQ=255)
                        gTATCGGCTTTAGTGTGCTTCTGGTGCAAAGCGCTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAAc                                                                             <  2:940921/100‑1 (MQ=255)
                            cGGCTTTATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTa                                                                         >  2:3106983/1‑100 (MQ=255)
                             ggCTTTATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTAc                                                                        >  1:2936067/1‑100 (MQ=255)
                               cTTTATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTAcc                                                                       <  2:3120779/99‑1 (MQ=255)
                               cTTTATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCg                                                                      >  1:730636/1‑100 (MQ=255)
                                tttATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGc                                                                     <  1:3721481/100‑1 (MQ=255)
                                  tATTGTGCTTCTGGTGCAAAGCGTTGCGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTg                                                                   >  2:3546197/1‑100 (MQ=255)
                                  tATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTg                                                                   >  1:220966/1‑100 (MQ=255)
                                   aTTGTGCTTCTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCAGGATATCGCCAACAAAACGCTACCGCTGt                                                                  >  1:2039578/1‑100 (MQ=255)
                                    ttGTGCTTCTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGtt                                                                 >  2:1516686/1‑100 (MQ=255)
                                     tgtgCTTCTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGttt                                                                >  2:351352/1‑100 (MQ=255)
                                      gtgCTTCTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTc                                                               >  1:3642102/1‑100 (MQ=255)
                                           tCTGGTGCAAAGCGTTGAAGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAAAGCTACCGCTGTTTCGACAt                                                          >  2:1557281/1‑100 (MQ=255)
                                            cTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATg                                                         >  1:121095/1‑100 (MQ=255)
                                            cTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATg                                                         <  2:243821/100‑1 (MQ=255)
                                            cTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATg                                                         >  2:3418451/1‑100 (MQ=255)
                                              ggTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTc                                                       >  2:971551/1‑100 (MQ=255)
                                                 gCAAAGCGTTGAGGGCGAAAAAGGGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAAt                                                    <  1:2066899/100‑1 (MQ=255)
                                                 gCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAAt                                                    >  2:250922/1‑100 (MQ=255)
                                                 gCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAAt                                                    >  1:3579910/1‑100 (MQ=255)
                                                 gCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAAt                                                    >  2:392558/1‑100 (MQ=255)
                                                  cAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATa                                                   >  2:1837936/1‑100 (MQ=255)
                                                   aaaGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTggcgctggcctctttttcgccctcaacgctttgcaccagaagcacaataaa                                                  <  2:1568756‑M2/100‑52 (MQ=255)
                                                   aaaGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAg                                                  >  2:1188371/1‑100 (MQ=255)
                                                     aGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCg                                                <  1:2786899/100‑1 (MQ=255)
                                                     aGCGTTGACGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGTCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAACAGCg                                                <  2:3679703/100‑1 (MQ=255)
                                                      gCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCg                                                <  2:367453/99‑1 (MQ=255)
                                                       cGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCGAg                                              <  2:1792132/100‑1 (MQ=255)
                                                       cGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCGAg                                              <  2:2041440/100‑1 (MQ=255)
                                                       cGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCGAg                                              <  1:3045218/100‑1 (MQ=255)
                                                       cGTTGAGGACAAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCGAg                                              <  2:246324/100‑1 (MQ=255)
                                                        gTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCGAGt                                             >  1:1355672/1‑100 (MQ=255)
                                                             gggCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCGAGTCATTa                                        >  2:1376567/1‑100 (MQ=255)
                                                             gggCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCGAGTCATTa                                        <  2:1053180/100‑1 (MQ=255)
                                                             gggCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCGAGTCATTa                                        >  2:1905672/1‑100 (MQ=255)
                                                             gggCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCGAGTCATTa                                        <  1:400910/100‑1 (MQ=255)
                                                             gggCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCGAGTCATTa                                        >  2:3634873/1‑100 (MQ=255)
                                                               gCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCACGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTACGCCATGACAATAGCGAGTCATTaag                                      >  1:2464470/1‑98 (MQ=255)
                                                               gCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTggcctctttttcgccctcaacgctttgcaccagaagcacaataaagccgatacagacgctacc                                      <  1:2008601‑M2/100‑64 (MQ=255)
                                                               gCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCGAGTCATTACg                                      <  2:220961/100‑1 (MQ=255)
                                                                 gAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCGAGTCATTACGCa                                    <  2:3630884/100‑1 (MQ=255)
                                                                  aaaaaGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCGAGTCATTACGCa                                    <  1:3283090/99‑1 (MQ=255)
                                                                  aaaaaGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGAGAGTCATTACg                                      >  2:1556149/1‑97 (MQ=255)
                                                                    aaaGAGGCCAGCGCCGCTCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCGAGTCATTACGCAAgg                                 <  1:733443/100‑1 (MQ=255)
                                                                     aaGAGGCCAGCGCCGCGCGGCAGGCCAAGCTAGCGCTGGATATCGCCAAAAAAACGCTACCGCTGTTTCGCCATCTCAATAGCGAGTGATTACGCAAGGt                                >  2:3018207/1‑100 (MQ=255)
                                                                       gagGCCAGCGCCGCGCGGCAGGCCAAGCTggcgctggcctcttgttctccctcaacgctttgcagtagaagcacaataaagccgatacagacgctaccg                               <  2:3673473‑M2/99‑71 (MQ=255)
                                                                        agGCCAGCGCCGCGCGGCAGGCCAAGCTggcgctggcctctttttcgccctcaacgctttgcaccagaagcacaataaagccgatacagacgctaccgag                             <  1:2753622‑M2/100‑73 (MQ=255)
                                                                        agGCCAGCGCCGCGCGGCAGGCCAAGCTggcgctggcctctttttcgccctcaacgctttgcaccagaagcacaataaagccgatacagacgctaccgag                             <  1:3525084‑M2/100‑73 (MQ=255)
                                                                        agGCCAGCGCCGCGCGGCAGGCCAAGCTggcgctggcctctttttcgccctcaacgctttgcaccagaagcacaataaagccgatacagacgctaccgag                             <  1:2388148‑M2/100‑73 (MQ=255)
                                                                         ggCCAGCGCCGCGCGGCAGGCCAAGCTggcctctttttcgccctcaacgctttgcaccagaagcacaataaagccgatacagacgctaccgaggatcatt                            <  1:3761662‑M2/100‑74 (MQ=255)
                                                                         ggCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCGAGTCATTACGCAAGGTCTGc                            >  2:2845938/1‑100 (MQ=255)
                                                                          gCCAGCGCCGCGCGGCAGGCCAAGCTggcgctggcctctttttcgccctcaacgctttgcaccagaagcacaataaagccgatacagacgctaccgagga                           <  1:797799‑M2/100‑75 (MQ=255)
                                                                          gCCAGCGCCGCGCGGCAGGCCAAGCTggcgctggcctctttttcgccctcaacgctttgcaccagaagcacaataaagccgatacagacgctaccgagga                           <  2:3438425‑M2/100‑75 (MQ=255)
                                                                          gCCAGCGCCGCGCGGCAGGCCAAGCTggcgctggcctctttttcgccctcaacgctttgcaccagaagcacaataaagccgatacagacgctaccgagga                           <  1:3908061‑M2/100‑75 (MQ=255)
                                                                          gCCAGCGCCGCGCGGCAGGCCAAGCTggcgctggcctctttctcgccctcaacgctttgcaccagaagcacaataaagccgatacagacgctaccg                               <  2:2262112‑M2/96‑71 (MQ=255)
                                                                           ccAGCGCCGCGCGGTAGGCCAAGCTGTCGCTGGATTTTGCCAACAAAACGCTACCGCTGTTTCGTCATGTCAATAGTGAGTCATTACGCAAGGTCTGCGa                          <  2:1921524/100‑1 (MQ=255)
                                                                           ccAGCGCCGCGCGGCAGGCCAAGCTggcgctggcctctttttcgccctcaacgctttgcaccagaagcacaataaagccgatacagacgctaccgaggat                          <  1:1361697‑M2/100‑76 (MQ=255)
                                                                           ccAGCGCCGCGCGGCAGGCCAAGCTggcgctggcctctttttcgccctcaacgctttgcaccagaagcacaataaagccgatacagacgctaccgaggat                          >  1:1568771‑M2/1‑25 (MQ=255)
                                                                           ccAGCGCCGCGCGGCAGGCCAAGCTggcgctggcctctttttcgccctcaacgctttgcaccagaagcacaataaagccgatacagacgctaccgaggat                          >  1:749617‑M2/1‑25 (MQ=255)
                                                                           ccAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCGAGTCATTACGCAAGGTCTGCGa                          >  2:2740711/1‑100 (MQ=255)
                                                                           ccAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCGAGTCATTACGCAAGGTCTGCGa                          >  1:3751210/1‑100 (MQ=255)
                                                                            cAGCGCCGCGCGGCAGGCCAAGCTggcactggcctctctttcgccctcaacgctttgcaccagaagcacaataaagccgatacagacgctaccgaggatc                         <  2:1140198‑M2/100‑77 (MQ=255)
                                                                            cAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCGAGTCATTACGCAAGGTCTGCGaa                         <  2:722813/100‑1 (MQ=255)
                                                                            cAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCGAGTCATTACGCAAGGTCTGCGaa                         <  1:3195826/100‑1 (MQ=255)
                                                                                gccgcGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCGAGTCATTACGCAAGGTCTGCGAAATTa                     <  1:2577164/100‑1 (MQ=255)
                                                                                 ccgcGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCGAGTCATTACGCAAGGTCTGCGAAATTAt                    >  2:3318379/1‑100 (MQ=255)
                                                                                  cgcgcgGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCGAGTCATTACGCAAGGTCTGCGAAATTATc                   >  1:1469792/1‑100 (MQ=255)
                                                                                       ggCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCGAGTCATTACGCAAGGTCTGCGAAATTATCCGCGa              >  2:3908836/1‑100 (MQ=255)
                                                                                        gCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCGAGTCATTACGCAAGGTCTGCGAAATTATCCGCGAt             <  1:49724/100‑1 (MQ=255)
                                                                                          aGGCCAAGCTGGCGCTGGATATCGCTAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCGAGTCATTACGCAAGGTCTGCGAAATTATCCGCGATGa           <  1:1242982/100‑1 (MQ=255)
                                                                                          aGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCGAGTCATTACGCAAGGTCTGCGAAATTATCCGCGATGa           <  1:2731324/100‑1 (MQ=255)
                                                                                           ggCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCCTGTCTATATCGAGTCATTACGCTAGGTCTGCGAAATTATCCGCGCTg            >  2:2553020/1‑98 (MQ=255)
                                                                                           ggCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCGAGTCATTACGCAAGGTCTGCGAAATTATCCGCGATGAc          >  1:1153308/1‑100 (MQ=255)
                                                                                            gCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCGAGTCATTACGCAAGGTCTGCGAAATTATCCGCGATGACa         >  1:409787/1‑100 (MQ=255)
                                                                                             ccAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCGAGTCATTACGCAAGGTCTGCGAAATTATCCGCGATGACAt        <  2:256470/100‑1 (MQ=255)
                                                                                              cAAGGTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCGAGTCATTACGCAAGGTCTGCGAAATTATCCGCGATg            <  1:1359288/95‑1 (MQ=255)
                                                                                               aaGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCGAGTCATTACGCAAGGTCTGCGAAATTATCCGCGATGACAtt       <  2:841012/99‑1 (MQ=255)
                                                                                                 gCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCGAGTCATTACGCAAGGTCAGCGAAATTATCCGCGATGACATTCAc    >  2:2017609/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
TTCCAATGATCCTCGGTAGCGTCTGTATCGGCTTTATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCGAGTCATTACGCAAGGTCTGCGAAATTATCCGCGATGACATTCACGC  >  NC_000913/2499194‑2499392

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.