| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,891,179 | G→C | 19.2% | S240R (AGC→AGG) | cysJ ← | sulfite reductase, alpha subunit, flavoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,891,179 | 0 | G | C | 19.2% | 332.1 / 69.8 | 149 | S240R (AGC→AGG) | cysJ | sulfite reductase, alpha subunit, flavoprotein |
| Reads supporting (aligned to +/- strand): ref base G (49/69); new base C (14/14); total (66/83) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.25e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.12e-01 | |||||||||||
Only 100 of 155 total aligned reads displayed.
ACCCGGCTGGTAACGCATGCCCGAGTCACCTAAGTCAATTTCGATATGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCATTTACCGCGCCAGTAGCGACGGATTGCGAAGGTGCCGCGACAGGCGCACGC > NC_000913/2891080‑2891278 | aCCCGGCTGGTAACGCATGCCCGAGTCACCTAAGTCAATTTCGATATGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAgg < 1:2857130/100‑1 (MQ=255)aCCCGGCTGGTAACGCATGCCCGAGTCACCTAAGTCAATTTCGATATGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAgg < 1:3749642/100‑1 (MQ=255) cccGGCTGGTAACGCATGCCCGAGTCACCTAAGTCAATTTCGATATGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGc < 1:1114366/100‑1 (MQ=255) cGGCTGGTGACGCATGCCCGAGTCACCTAAGTCAATTTCGATATGGCGAACGTCTTTTTCAGTGTTATGCCCGGTAATTTTCTGGTTAACAGAGAGGCTa < 2:752640/100‑1 (MQ=255) ggCTGGTAACGCATGCCCGAGTCACCTAAGTCAATTTCGATATGGCGAACGTCTTTTTCAGTGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGCCTAg > 2:3765831/1‑100 (MQ=255) gCTGGTAACGCATGCCCGAGTCACCTAAGTCAATTTCGATATGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGc > 1:755460/1‑100 (MQ=255) gCTGGTAACGCATGCCCGAGTCACCTAAGTCAATGTCGATATGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGc > 2:2461304/1‑100 (MQ=255) cTGGTAACGCATGCCCGAGTCACCTAATTCAATTTCGATATGGCGAACGTCTTTTTCAGAGTTACGCCCTGTAATTTTCTGGTTAACAGAGAGGCTAGcc < 2:2068914/100‑1 (MQ=255) ggTAACGCATGTCCTATTCACCTAAGTCAATTTCGATATGGTGAACGTCTTTGTCATAGTTACGCTCGGTAATTTTCTGGTTAACAGAGAGGCTAGcc < 2:1345853/98‑1 (MQ=255) tAACGCATGCCCGAGTCACCTAAGTCAATTTCGATATTGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGccacca < 2:470763/100‑1 (MQ=255) aaCGCATGCCCGAGTCACCTAAGTCAATTTCGATATGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAg < 1:453322/100‑1 (MQ=255) aCGCATGCCCGAGTCACCTAAGTCAATTTCGATATGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAgc < 2:2464526/100‑1 (MQ=255) aTGCCCGAGTCACCTAAGTCAATTTCGATATGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAgcggcg < 1:1764169/100‑1 (MQ=255) gCCCGCGTCACCTAAGTCAATTTCGATATGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTTATTAACAGAGAGGCTATCCACCAGCGCcgcg > 2:896106/1‑100 (MQ=255) ccGAGTCACCTAAGTCAATTTCGATATGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTc > 1:519522/1‑100 (MQ=255) cGAGTCACCTAAGTCAATTTCGATATGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCt > 1:3846897/1‑100 (MQ=255) gAGTCACCTAAGTCAATTTCGATATGGTGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCt < 1:1321578/99‑1 (MQ=255) aGTCACCTAAGTCAATTTCGATATGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCttt < 2:3213901/100‑1 (MQ=255) gTCACCTAAGTCAATTTCGATATGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGCCTAGCCACCAGCGGCGCGTCTTTg < 1:2217700/100‑1 (MQ=255) gTCACCTAAGTCAATTTCGATATGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGCCTAGCCACCAGCGGCGCGTCTTTg < 2:2146488/100‑1 (MQ=255) tCACCTAAGTCAATTTCGATATGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTg < 1:764648/99‑1 (MQ=255) tCACCTAAGTCAATTTCGATATGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGc < 1:1115312/100‑1 (MQ=255) tCACCTAAGTCAATTTCGATATGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGc < 1:3889026/100‑1 (MQ=255) tCACCTAAGTCAATTTCGATATGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGc < 1:2936039/100‑1 (MQ=255) tCACCTAAGTAAATTTCGATATGGCGAACGTCTTTTTCAGATTTACGTCCGGTAATTTTCTGGTTAACAGAGACGCTAGTCACCAGAGGcgcgcaggtga < 2:452071/100‑8 (MQ=255) aCCTAAGTCAATTTCGATATGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGCCTAGCCACCAGCGGCGCGTCTTTGCt < 1:2771631/99‑1 (MQ=255) ccTAAGTCAATTTCGATATGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTg < 2:3836725/99‑1 (MQ=255) ccTAAGTCAATTTCGATATGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGt > 2:2005271/1‑100 (MQ=255) ccTAAGTCAATTTCGATATGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGt > 1:3179518/1‑100 (MQ=255) cTAAGTCAATTTCGATATGGAGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTa > 2:1883851/1‑100 (MQ=255) tAAGTCAATTTCGATATGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTAc > 1:3891136/1‑100 (MQ=255) aaGTCAATTTCGATATGGCGAACTTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACg < 1:197163/100‑1 (MQ=255) aaGTCAATTTCGATATGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACg > 2:1842012/1‑100 (MQ=255) aaGTCAATTTCGATATGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACg < 1:1243245/100‑1 (MQ=255) gTCAATTTCGATATGGCGAATGTCTTTTTCAGAGATACGCCCGGTAAATTTCTGGTTAACAGAGAGACTAGCCCGCAGCGGCGCGGCtttaat > 2:3447517/1‑90 (MQ=255) gTCAATTTCGACATGACGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACgg < 2:7474/99‑1 (MQ=255) tCAATTTCGATATGGCGAACTTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACg < 2:1058234/97‑1 (MQ=255) tCAATTTCGATATGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGc > 2:2842690/1‑100 (MQ=255) cAATTTCGATATGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACggg > 2:173786/1‑98 (MQ=255) aTTTCGATATGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTgg > 1:3244159/1‑100 (MQ=255) aTTTCGATATGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGCCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTgg > 2:1293239/1‑100 (MQ=255) tttCGATATGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGCCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGgt > 1:1341211/1‑100 (MQ=255) tCGATATGGTGAACGTCTTTTTCAGAGTTACGCTTGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGgtgt < 1:2330160/100‑1 (MQ=255) cGATATGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGtgtg < 2:3894366/100‑1 (MQ=255) cGATATGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGtgtg < 2:863957/100‑1 (MQ=255) cGATATGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGCCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGtgtg > 1:2484414/1‑100 (MQ=255) atGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGAtt < 1:1360732/100‑1 (MQ=255) atGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGACTAGCCACCAGCGGAGCGTCTTTGCTGTAAGGGCTGGTGTGGAt > 2:169235/1‑99 (MQ=255) tGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGAttt > 2:2034384/1‑100 (MQ=255) ggCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTc > 2:1242492/1‑100 (MQ=255) ggCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTc > 2:1573621/1‑100 (MQ=255) ggCGAACGTCTTTTTCAGAGTTAAGCCCGGTAATTTTATGGTTAACAGAGAGGCTAGCCACCAGAGGCGAGTCTTTGCTGTAAGGGCTGGTGTGGATTTc > 2:2325708/1‑100 (MQ=255) gCGAACGTCTTTTTCAGAGTTACTCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCa < 1:920791/100‑1 (MQ=255) gCGAACGTCTTTTTCAGAGTTACGCCCGGTATTTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCa < 1:1514201/100‑1 (MQ=255) gCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCa > 1:684790/1‑100 (MQ=255) cGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCAt < 1:1242506/100‑1 (MQ=255) cGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCAt < 2:2891720/100‑1 (MQ=255) gAACGTCTTTTTCAGAGTTAAGCAAGGTAATTTTCTGGTGAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTCGATTTCAtt > 2:634339/1‑100 (MQ=255) aaCGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGCCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCAttt < 2:1197473/100‑1 (MQ=255) tCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCATTTACcg > 1:2021885/1‑100 (MQ=255) cTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCATTTACcgc > 1:2753826/1‑100 (MQ=255) cTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCATTTACcgc < 2:2669567/100‑1 (MQ=255) cTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGACTTTGGTGTACGGGCTGGTGTGGATTTCATTTACcgc > 2:2633843/1‑100 (MQ=255) tttCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCATTTACCGCGcc > 1:3003719/1‑100 (MQ=255) ttCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCATTTACCGCGCCa > 2:1070320/1‑100 (MQ=255) agagTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCATTTACCGCGCCAGTa < 2:684782/100‑1 (MQ=255) agTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCATTTACCGCGCCAGTAGc < 1:1200029/100‑1 (MQ=255) gTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCATTTACCGCGCCAGTAGc < 2:1466136/99‑1 (MQ=255) gTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCATTTACCGCGCCAGTAGCg < 2:1172155/100‑1 (MQ=255) cGCCCGGTAATTTTCTGCTTAACAGAGAGCCTAGCCACCAGCTGCGCGTCTTTGCTGTACGGGCTGGTGTGTATTTATTTTAACGCCCTAGCAGCTAc > 1:322039/1‑98 (MQ=255) cccGGTAATTTTCTGGTTAACAGAGAGCCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCATTTACCGCGCCAGTAGCGACGGAt > 2:1405478/1‑100 (MQ=255) cGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCATTTACCGCGCCAGTAGCGACGGATTg < 1:3455904/100‑1 (MQ=255) cGGTAATTTTCTGGTTAACAGAAAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCATTTACCGCGCCAGCAGCCACGGATTg > 2:2265732/1‑100 (MQ=255) ggTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCATTTACCGCGCCAGTAGCGACGGATTGc < 1:2663433/100‑1 (MQ=255) ggTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCATTTACCGCGCCAGTAGCGACGGATTGc < 1:1193406/100‑1 (MQ=255) tAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCATTTACCGCGCCAGTAGCGACGGATTGCGa < 1:1842027/100‑1 (MQ=255) aaTTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCATTTACCGCGCCAGTAGCGACGGATTGCGaa < 2:1698638/100‑1 (MQ=255) aaTTTTCTGGTTAACAGAGAGCCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGATGAAAAAGATTTAATATACCGCGCAAGTAGCGACGGATTGCGaa > 1:2454781/1‑100 (MQ=255) aTTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGAATTTCATTTACCGCGCCAGTAGCGACGGATTGCGAAg > 1:3326284/1‑100 (MQ=255) ttttCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCATTTACCGCGCCAGTAGCGACGGATTGCGAAgn < 2:1154769/100‑2 (MQ=255) ttCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCATTTACCGCGCCAGTAGCGACGGATTGCGAAGGTg < 2:3711578/100‑1 (MQ=255) ttCTGGTTAACAGAGAGCCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCATTTACCGCGCCAGTAGCGACGGATTGCGAAGGTg < 2:3269472/100‑1 (MQ=255) cTGGTTAACAGAGAGCCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCATTTACCGCGCCAGTAGCGACGGATTGCGAAGGTGcc < 1:3666404/100‑1 (MQ=255) ggTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCATTTACCGCGCCAGTAGCGACGGATTGCGAAGGTGCcgc < 1:2395230/100‑1 (MQ=255) ggTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCATTTACCGCGCCAGTAGCGACGGATTGCGAAGGTGCcgc < 2:2499174/100‑1 (MQ=255) ggTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCATTTACCGCGCCAGTAGCGACGGATTGCGAAGGTGCcgc > 1:809471/1‑100 (MQ=255) gTTAACAGAGAGTCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCATTTACCGCGCCAGTAGCGACGGATTGCGAAGGTGCcgcg > 2:2975846/1‑100 (MQ=255) gTTAACAGAGAGGCTAGTTATTAGCGGCGCGTTTTTGCTGTACGGGCTGGTGTGGATTTCATTTACCGCGCCAGTAGCGACGGATTGCGAAGGTGCcgcg < 1:581509/100‑1 (MQ=255) gTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGGTGTACGGGCTGGTGTGGATTTCATTTACCGCGCCAGTAGCGACGGATTGCGAAGGTGCcgcg > 2:2077003/1‑100 (MQ=255) gTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGTTTTCATTTACCGCGCCAGTAGCGACGGATTGCGAAGGTGCcgcg < 2:2996100/100‑1 (MQ=255) gTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCATTTACCGCGCCAGTAGCGACGGATTGCGAAGGTGCcgcg < 1:3248267/100‑1 (MQ=255) tAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCATTTACCGCGCCAGTAGCGACGGATTGCGAAGGTGCCGCGAc < 2:2151629/100‑1 (MQ=255) tAACAGAGAGCCTAGCCACCAGTGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCATTTACCGCGCCAGTAGCGACGGATTGCGAAGGTGCCGCGAc < 2:939588/100‑1 (MQ=255) aaCAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCATTTACCGCGCCAGTAGCGACGGATTGCGAAGGTGCCGCGa < 2:3525557/98‑1 (MQ=255) aCAGTGCGGCTAGCAACCAGCGGAGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCATTTACCGCGCCAGTAGCGACGGATTGCGAAGGTGCCGCGACAg > 2:3729634/1‑100 (MQ=255) agagGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCATTTACCGCGCCAGTAGCGACGGATTGCGAAGGTGCCGCGACAGgcgc < 1:3844525/100‑1 (MQ=255) agGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCATTTACCGCGCCAGTAGCGACGGATTGCGAAGGTGCCGCGACAGGCGCAc < 2:3589503/100‑1 (MQ=255) ggCTAGCCACCAGCGGTGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCATTTACCGCGCCAGTAGCGACGGATTGCGAAGGTGCCGCGACAGGCGCAc > 1:48471/1‑99 (MQ=255) ggCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCATTTACCGCGCCAGTAGCGACGGATTGCGAAGGTGCCGCGACAGGCGCAcg > 1:3705919/1‑100 (MQ=255) ggCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCATTTACCGCGCCAGTAGCGACGGATTGCGAAGGTGCCGCGACAGGCGCAcg > 1:2839782/1‑100 (MQ=255) | ACCCGGCTGGTAACGCATGCCCGAGTCACCTAAGTCAATTTCGATATGGCGAACGTCTTTTTCAGAGTTACGCCCGGTAATTTTCTGGTTAACAGAGAGGCTAGCCACCAGCGGCGCGTCTTTGCTGTACGGGCTGGTGTGGATTTCATTTACCGCGCCAGTAGCGACGGATTGCGAAGGTGCCGCGACAGGCGCACGC > NC_000913/2891080‑2891278 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |