| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,822,869 | G→A | 18.2% | R157H (CGC→CAC) | spoT → | bifunctional (p)ppGpp synthetase II/ guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,822,869 | 0 | G | A | 18.2% | 346.2 / 58.4 | 157 | R157H (CGC→CAC) | spoT | bifunctional (p)ppGpp synthetase II/ guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase |
| Reads supporting (aligned to +/- strand): ref base G (70/57); new base A (18/11); total (88/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.39e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.26e-01 | |||||||||||
Only 100 of 175 total aligned reads displayed.
TGGCGATGGTGCAGGATATCCGCGTCATCCTCATCAAACTTGCCGACCGTACCCACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCTGGGTTTTGAGGCGCT > NC_000913/3822770‑3822968 | tGGCGATGGTGCAGGATATCCGCGTCATCCTCATCAAACTTGCCGACCGTACCCACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTcgccg < 2:3549064/100‑1 (MQ=255) ggCGATGGTGCAGGATATCCGCGTCATCCTCATCAAACTTGCCGACCGTACCCACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTcgccgc < 1:1727949/100‑1 (MQ=255) gCGATGGTGCAGGATATCCGCGTCATCCTCATCAAACTTGCCGACCGTACCCACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTcgccgc > 2:3008014/1‑99 (MQ=255) gCGATGGTGCAGGATATCCGCGTCATCCTCATCAAACTTGCCGACCGTACCCACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCcaca > 1:121829/1‑100 (MQ=255) gCGATGGTGCAGGATATCCGCGTCATCCTCATCAAACTTGCCGACCGTACCCACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCa > 1:83664/1‑100 (MQ=255) gCGATGGTGCAGGATATCCGCGTCATCCTCATCAAACTTGCCGACCGTACCCACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCa > 1:2079537/1‑100 (MQ=255) ggTGCAGGATATCCGCGTCATCCTCATCAAACTTGCCGACCGTACCCACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGcc < 2:3655362/100‑1 (MQ=255) gTGCAGGATATCCGCGTCATCCTCATCAAACTTGCCGACCGTACCCACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGccc > 1:3374402/1‑100 (MQ=255) gTGCAGGATATCCGCGTCATCCTCATCAAACTTGCCGACCGTACCCACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGccc > 1:2515029/1‑100 (MQ=255) tccatgagatCCGCGTCATCCTCATCATACTTGCCCACCTTACCCACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCg < 2:3654138/92‑1 (MQ=255) tGCAGGATATCCGCGTCATCCTCATCAAACTTGCCGACCGTACCCACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCACATCGCCCg > 2:3033177/1‑100 (MQ=255) tGCAGGATATCCGCGACATCATCATCAAACTTGCCGACCGTACCCACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGccc > 2:911798/1‑99 (MQ=255) gCAGGATATCCGCGTCATCCTCATCAAACTTGCCGACCGTACCTACAACATGCGCACGCTGGGCTCACTTAGACCGGACAAACGTCGCCACATCGCCCGt > 1:2119746/1‑100 (MQ=255) gCAGGATATCCGCGTCATCCTCATCAAACTTGCCGACCGTACCCACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGcc > 2:352577/1‑97 (MQ=255) gCAGGATATCCGCGTCATCCTCATCAAACTTGCCGACCGTACCCACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGt > 2:233222/1‑100 (MQ=255) cAGGATATCCGCGTCATCCTCATCAAACTTGCCGACCGTACCCACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCACATCGCCCGTg < 2:1879838/100‑1 (MQ=255) aGGATATCCGCGTCATCCTCATCAAACTTGCCGACCGTACCCACAACATACGCACTCTAGACTCACTACGCCCGGACAAACGTCGCCACATCGCCCg > 1:572973/1‑97 (MQ=255) ggATATCCGCGTCATCCTCATCAAACTTGCCGACCGTACCCACAACATGCGCACGCTGGACTCAATTCGCCCCAACAAAAGTCGCCACATCTcccataaa > 1:3733734/1‑95 (MQ=255) atatCCGCGTCATCCTCATCAAACTTGCCGACCGTACCCACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAAc < 1:1350312/100‑1 (MQ=255) tCCGCGTCATCCTCATCAAACTTGCCGACCGTACCCACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAActct > 1:2102319/1‑100 (MQ=255) ccGCGTCATCCTCATCAAACTTGCCGACCGTACCCACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACtctc > 2:1423157/1‑100 (MQ=255) cgcgTCATCCTCATCAAACTTGCCGACCGTACCCACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCg < 1:3513212/100‑1 (MQ=255) tCATCCTCATCAAACTTGCCGACCGTACCTACTACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAAt < 1:975013/100‑1 (MQ=255) aTCCTCATCAAACTTGCCGACCGTACCCACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAAttt > 2:2077923/1‑100 (MQ=255) catcaAACTTGCCGACCGTACCCACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGc < 2:1322076/100‑1 (MQ=255) catcaAACTTGCCGACCGTACCCACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGc > 2:1062241/1‑100 (MQ=255) caAACTTGCCGACCGTACCCACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCg > 2:2905228/1‑100 (MQ=255) aaaCTTGCCGACCGTACCCACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGc > 1:153947/1‑100 (MQ=255) aaCTTGCCGACCGTACCCACAACATGAGAACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGTCAGTGAAACTCTCGAAATTTATAGCCCGc > 2:2110375/1‑99 (MQ=255) aCTTGCCGACCGTACCCACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTg > 2:722412/1‑100 (MQ=255) ttGCCGACCGTACCCACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGgc < 1:2318478/100‑1 (MQ=255) gCCGACCGTACCCACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCACGCTAgcg > 1:927626/1‑99 (MQ=255) gACCGTACCCACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCAc < 2:1182084/99‑1 (MQ=255) aCCGTACCCACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCg > 2:3434885/1‑100 (MQ=255) aCCGTACCCACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCACATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCg > 2:36756/1‑100 (MQ=255) tACCCACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTa < 2:1974075/100‑1 (MQ=255) tACCCACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTa < 1:3434924/100‑1 (MQ=255) cccACAACATGCGCACGCTGGGCTCCCTTCGCCCGGACAAACGTCGCCACATCGCCCGTGCAACTCTCGAAATTTATAGCCCGCTGGCGCACAGTTTAgg > 1:1434220/1‑100 (MQ=255) cccACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAgn < 1:3811812/100‑2 (MQ=255) cccACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAgg > 1:71998/1‑100 (MQ=255) cccACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAgg < 2:1932764/100‑1 (MQ=255) cccACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAgg < 1:1912226/100‑1 (MQ=255) cccACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAgg < 2:203529/100‑1 (MQ=255) cccACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCACATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAgg > 2:2004425/1‑100 (MQ=255) ccACAACATGCGCACGCTGGGCTTACTTCGTCTGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAgg < 1:286124/99‑1 (MQ=255) ccACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGt > 1:2370780/1‑100 (MQ=255) cacaACATGCTCACGCTGGGCTCACTTCGCTCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTa < 1:674334/100‑1 (MQ=255) cacaACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGTATTTTATAGCCCGCTGGCGCACCGTTTAGGTa < 2:2484001/100‑1 (MQ=255) cacaACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCATGAAACTCTAGAAATTTATAGCCCGCTGGCGCAACGTTTAGGTa > 1:2282010/1‑100 (MQ=255) cacaACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCACATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTa > 1:1024665/1‑100 (MQ=255) acaacaTGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTAt > 1:1884758/1‑100 (MQ=255) caacaTGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATc > 2:1773665/1‑100 (MQ=255) acaTGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCACATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATcca < 1:3033204/100‑1 (MQ=255) aTGCGCACGCTGGGCTCACTTCGCCCGGATAAACGTCGCCACATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATccacc < 1:1383028/100‑1 (MQ=255) aTGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATccacn < 2:3307502/100‑2 (MQ=255) aTGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATccacc < 1:2002843/100‑1 (MQ=255) cgcACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACcaca > 2:76053/1‑100 (MQ=255) cACGCTTCGCTCACTTCTCCCGGACAAACGTCGCCGCATCGCCCGTTAAACTCTCGAAATTTATAGCCCGCTTGCGCACCGTTTAGGTATccacc < 2:3759644/95‑1 (MQ=255) aCGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAATTTTATAGCCCTCTGGCGCACCGTTTAGGTATCCACCACATTa < 1:2644177/100‑1 (MQ=255) cGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTaa > 1:3067701/1‑100 (MQ=255) cGCTGGGCTCACTTCGCCCGGACAAACGTCGCCACATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTaa > 1:1617449/1‑100 (MQ=255) gCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTaaa < 1:2583367/100‑1 (MQ=255) cTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTaaaa < 1:251863/100‑1 (MQ=255) tGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCAGATAGCGCACCGTTTAGGTATCCACCACATTAAAAc > 1:2456636/1‑100 (MQ=255) gggCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAAcc > 2:1166154/1‑100 (MQ=255) gggCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAAc < 2:2322303/99‑1 (MQ=255) ggCTCACTGCGCCCGGACGAGCGTCTCCTGATCGCCCGTGAAGCTCTTGAAATGTATATCCCGCTGGCGCATCGTTCAGGTATCCACCACATTaaggcc < 2:2269057/99‑5 (MQ=255) gCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGa < 1:3762048/100‑1 (MQ=255) gCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTATAGAAATTTATAGCCCGATGGCGCACCGTTTAGGTATCCACCACATTAAAAACGa > 1:2335000/1‑100 (MQ=255) cTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGaa > 2:3703845/1‑100 (MQ=255) tCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAAc < 1:2876643/100‑1 (MQ=255) cACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACt > 2:2559983/1‑100 (MQ=255) cACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACt > 1:2350755/1‑100 (MQ=255) cTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCg > 2:226888/1‑100 (MQ=255) cTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCg < 2:3374364/100‑1 (MQ=255) ttCGCCCGGACAAACGTCGCCGCATCGCCTGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGa < 1:3661705/100‑1 (MQ=255) ttCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTAGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGa > 1:3317635/1‑100 (MQ=255) tCGCCCGGACAAACGTCGCCGCATCACCCGTGATTCTCTCGAAATTTATATCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACGCGaa < 2:3400302/100‑1 (MQ=255) cGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAag > 2:841404/1‑100 (MQ=255) cGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAag > 1:50714/1‑100 (MQ=255) cGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCt > 2:3107922/1‑100 (MQ=255) ggACAAACGTCGCCACATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCTg < 1:47369/100‑1 (MQ=255) aCAAACGTCGCCGTATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCTggg < 1:892202/100‑1 (MQ=255) cAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCTGGGt > 1:536241/1‑100 (MQ=255) cAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCTGGGt > 1:2705217/1‑100 (MQ=255) cAAACGTCGCCACATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCTggg > 2:3081936/1‑99 (MQ=255) cAAACGTCGCCACATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGAACCGATTAAGTAACCACCACATTAAAACCGAACTCGAAGAGCt > 1:43328/1‑96 (MQ=255) aaaCGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCTGGGtt < 2:1545354/100‑1 (MQ=255) aaCGTCGCCACATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCTGGGttt > 2:1021030/1‑100 (MQ=255) cGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCTGGGTTTTg > 1:2933812/1‑100 (MQ=255) cgtcgcATCGACAGTGAAAATCTCGAAATTAATAGCCCGCTGGCACACCGTTTAGGTATCCACAACATTAAAACCGAACTCGAAGAGATggg > 2:1426108/4‑92 (MQ=255) cgccgcATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCTGGGTTTTGa > 2:584213/1‑98 (MQ=255) cgccgcATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCTGGGTTTTGAgg < 2:2932318/100‑1 (MQ=255) cgccgcATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCTGGGTTTTGAgg < 2:2932613/100‑1 (MQ=255) gccgcATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGTCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCTGGGTTTTGAGgc > 2:442059/1‑100 (MQ=255) gccgcATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCTGGGTTTTGAGgc > 1:3465324/1‑100 (MQ=255) gccgcATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTAGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCTGGGTTTTGAGgc < 2:2804218/100‑1 (MQ=255) gccgcAGCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCTGGGTTTTGAgg < 2:1224985/99‑1 (MQ=255) gccacATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCTGGGTTTTGAgg < 2:1851968/99‑1 (MQ=255) cgcATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCTGGGTTTTGAAgcgc > 2:556924/1‑100 (MQ=255) | TGGCGATGGTGCAGGATATCCGCGTCATCCTCATCAAACTTGCCGACCGTACCCACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCTGGGTTTTGAGGCGCT > NC_000913/3822770‑3822968 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |