| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,060,261 | G→T | 15.7% | intergenic (+31/‑186) | typA → / → yihL | GTP‑binding protein/putative DNA‑binding transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,060,261 | 0 | G | T | 15.7% | 466.1 / 66.1 | 186 | intergenic (+31/‑186) | typA/yihL | GTP‑binding protein/putative DNA‑binding transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base G (81/74); new base T (15/15); total (97/89) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.44e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.13e-01 | |||||||||||
Only 100 of 191 total aligned reads displayed.
CGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTAT > NC_000913/4060162‑4060361 | cGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAg > 1:3760513/1‑100 (MQ=255)cGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAg > 2:2598617/1‑100 (MQ=255) gTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGc > 1:661319/1‑100 (MQ=255) tCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATg > 1:1551505/1‑100 (MQ=255) cGTAAACGTCACCTGACGGAAAACGATCGTCGCCGTGCTTTCTGTGCACTGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATgg < 1:436286/100‑1 (MQ=255) cGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATgg < 1:2570116/100‑1 (MQ=255) cGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATgg > 1:1893350/1‑100 (MQ=255) tAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCa > 1:3639739/1‑100 (MQ=255) cGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGtt > 1:1162137/1‑100 (MQ=255) gTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAGGtt < 1:1852899/99‑1 (MQ=255) gTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGttt > 1:531786/1‑100 (MQ=255) cACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAGGttttt < 1:1994523/100‑1 (MQ=255) aCCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGtttt > 2:56559/1‑98 (MQ=255) ccTGACGGAAAACGTTCGTTGTCGCGCTTACCGTGCAACGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAGGtttttt < 1:171345/99‑1 (MQ=25) ccTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGttttttt < 1:3284928/100‑1 (MQ=255) ccTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGttttttt < 1:3452143/100‑1 (MQ=255) ccTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGttttttt < 2:2207932/100‑1 (MQ=255) cTGACGGAAAACGATCGTCGCCGCGCCAACCGCGTACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAGGtttttta < 1:344061/99‑2 (MQ=38) cTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGtttttttt > 1:2827237/1‑100 (MQ=255) ttgcGGAAATCGATCGTCGTCGGGCTGACCTCGCACTGGGAGGCGGTTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGGGATGGCAGGtttttttt < 2:3640851/96‑1 (MQ=255) tGACGGAAAACGATCGTCGCCGTGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAGGttttttatg < 2:140708/100‑4 (MQ=38) tGACGGAAAACGATCGTCGCCGCGCCAACCGCTCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAGGttttttatg < 1:180461/100‑4 (MQ=38) tGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAGGttttttatg < 1:208462/100‑4 (MQ=255) tGACGGAAAACGATCGTCGCCGCGCCAACCACGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGttttttttg < 2:2646438/100‑2 (MQ=255) gACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGttttttttgc > 1:2212335/1‑98 (MQ=255) gACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGttttttttg > 1:3883889/1‑98 (MQ=255) aCGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGttttttttgcc < 2:674419/100‑4 (MQ=255) aCGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGttttttttgcc < 2:2776413/100‑4 (MQ=255) cGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAGGttttttatgact < 2:3768296/100‑7 (MQ=37) cGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGttttttttgcat > 1:1638558/1‑96 (MQ=255) ggAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTg > 1:3379183/1‑100 (MQ=255) ggAAAACGAGCGGCGCCGGTCCAGCCGCGTAACGAAAGCCGATTAATTTCGTGTGTTAGTCATAAAATACCTGCCAGCGATGGCAGGttttttt < 2:3236732/94‑1 (MQ=255) gAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGt > 1:1733493/1‑100 (MQ=255) gATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAg < 2:1699289/100‑1 (MQ=255) cgatctgccgcGCCAACCGCGCACCGAAAGTCGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAgc < 1:2995110/94‑1 (MQ=255) tcgtcgCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAgcg < 2:1093363/100‑1 (MQ=255) tcgtcgCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCATGTCGTGAgcg < 2:1638543/100‑1 (MQ=255) tcgtcgCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCGGCCAGCGATGGCAGGTTTTTTTTTGCCTGTCGTGAg < 1:2753996/99‑1 (MQ=255) cgtcgCCGCGCCAACCGCGCACTGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAgcgc < 1:1485521/100‑1 (MQ=255) gtcgCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTAAAAGCAATGGCAGG‑AATTTTTTGCCTGTCGTGAGCGca > 1:2196104/1‑100 (MQ=255) tcgCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGcac < 1:2257241/100‑1 (MQ=255) cgccgcGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGcaca < 1:1103681/100‑1 (MQ=255) cgccgcGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGcaca > 2:47332/1‑100 (MQ=255) gccgcGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAgcagatcg > 2:2995083/1‑94 (MQ=255) gccgcGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCacac > 2:829087/1‑100 (MQ=255) ccgcGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACAcc < 2:2918193/100‑1 (MQ=255) gcgcCAACCGCGCAACGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCaa > 2:927589/1‑100 (MQ=255) ccATCCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATg < 1:595077/99‑1 (MQ=255) ccAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCATGTAGTGAGCGCACACCAATGc > 1:3114709/1‑100 (MQ=255) cAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGc > 2:2024510/1‑99 (MQ=255) cAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCg > 2:58965/1‑100 (MQ=255) cAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGACTGTCGTGAGCGCACACCAATGCg > 2:2138487/1‑100 (MQ=255) aaCCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGCTGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGa > 2:1824498/1‑100 (MQ=255) aaCCGCGCACCGAAAGACGATTAAAATCATTTTTTAGTGATAAAAAACATGACAGCGATGACAGG‑TTATTTTAACTAGTAGTGAACGCACACCAATgaga > 2:1016195/1‑100 (MQ=255) aCCGCGTACCGAAAGACGATTAATTTCGTTGTTTAGTCATAAAAAACCTGCCAGCGATGGCA‑GTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAg < 2:755609/100‑1 (MQ=255) aCCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAg < 2:610004/100‑1 (MQ=255) aCCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAg < 2:2827211/100‑1 (MQ=255) aCCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAg < 1:3598677/100‑1 (MQ=255) cgcACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTAtc < 2:73504/100‑1 (MQ=255) cACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTAtctc > 2:2445727/1‑100 (MQ=255) aCCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTcc > 1:599722/1‑100 (MQ=255) ggaaGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGTTTTTTTTT‑CCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCtt > 1:101655/3‑100 (MQ=255) gAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCtt > 2:3807252/1‑100 (MQ=255) gAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGAGCACACCAATGCGAGTATATCCCtt > 1:767126/1‑100 (MQ=255) aaGACGATTAATTTCGTTTTTTAGTCATAAAAAATCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTtat < 1:3447621/100‑1 (MQ=255) cGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAg < 2:3719003/99‑1 (MQ=255) cGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGt < 1:2922220/100‑1 (MQ=255) cGATTAATCTCGTTTTTTAGTCATAAAAAACCTTCCAGCGATGGAAAG‑TTTTTGTTGCATGTCGGGAGAGCACCCCAATACGAGTATCTCCCGtatacg > 2:393617/1‑97 (MQ=255) ttttttttGTTTTTTTGTTATTATAATTTTGTCATCGGTGGCAGG‑TTTTTTTTGCCGGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTc < 1:533449/94‑1 (MQ=255) ttAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCtg < 1:1008336/100‑1 (MQ=255) cGTTTTTTAGTCATAAAAATCCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTAc < 1:2355386/100‑1 (MQ=255) cGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTAc < 1:2138506/100‑1 (MQ=255) gTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACg < 2:3100558/100‑1 (MQ=255) gTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACg > 1:2800691/1‑100 (MQ=255) gTTTTTTAGTCATAAAAAACCTGCCAGATATGTCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACg < 1:2287015/100‑1 (MQ=255) taactAAAAAACCTGCCAGCAATGGAAGG‑TTATTTTTGCCTGTCGTGAGTGCAAACCAATGCGAGTATCTCTCTTATAAGTATGTTGTTAAGTCAATag > 2:1660230/5‑99 (MQ=255) gTCATAAAAAACCTGCCAGCGAGGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTAGCTCCCTTATAAGTCTGTGGTTACGTCAATag > 2:3898826/1‑99 (MQ=255) tCATAAAAAGCCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATagag < 2:3437656/100‑1 (MQ=255) tCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGGGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATaga > 2:1950276/1‑99 (MQ=255) cATAAAAAACCTGTCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAATTCTGTGGTTAAGTCAATata > 2:549861/1‑96 (MQ=255) cATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATagaga < 2:2479935/100‑1 (MQ=255) cATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGACAATagaaa > 1:3680476/1‑98 (MQ=255) aaaaaaaaCCTGCCATCGCTGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATagagag > 1:3344987/3‑100 (MQ=38) tAAAAAACCTGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATagaga > 1:2837469/1‑98 (MQ=255) aaaaaaaCCTGCCATCGCTGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGc > 1:3730464/2‑100 (MQ=38) aaaaaaaCCTGCCATCGCTGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGc > 1:2725461/2‑100 (MQ=38) aaaaaaaCCTGCCATCGCTGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTAACGTCAATAGAGAGc > 1:3875849/2‑100 (MQ=38) aaaaaaCCTGCCAGCGATGGCAGGTTTTTTTTT‑TTTTTCTTGAGCGCACAACAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCt > 2:191447/1‑100 (MQ=255) aaaaCCTGCCATCGCTGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCttt > 1:2670077/1‑100 (MQ=39) aaaaCCTGCCATCGCTGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCttt > 1:2570555/1‑100 (MQ=38) aaaaCCTGCCATCGCTGGCAGG‑TTTTTTATGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCttt > 1:1625109/1‑100 (MQ=38) cTGCCAGCGATGGCAGG‑TTTTTTTTGCTTGTCGTGAGCGCACACCAATGCGAGTATCTCTCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTcac > 2:2556234/1‑100 (MQ=255) tGCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTcaca > 1:818201/1‑100 (MQ=255) gcaaGCGACGGCAGG‑TTTTTTTTGCATGTCGTGAGCGCACACCAATGCGAATACATCCCTTACAAATCTATGGTTACGTCAGTAGACAGCTTTGTgaca > 2:2724732/4‑99 (MQ=255) gCCAGCGCTTGCTGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGTCAGTATCTCGCTTATAAGTCTTTTTTTACTTCAATAGAGAGCTTTGt < 2:3028774/95‑1 (MQ=255) gCCAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTcataa > 2:2163903/1‑97 (MQ=255) ccAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAAt > 2:3286128/1‑100 (MQ=255) cAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAAtt > 2:1757853/1‑100 (MQ=255) cAGCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCACTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAAtt > 1:90162/1‑100 (MQ=255) gCGATGGCAGG‑TTTTTTTTGCCTGTCGTGAGTTTACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAAt < 1:186089/97‑1 (MQ=255) | CGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGTTTTTTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATTAT > NC_000913/4060162‑4060361 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |