Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,177,171 T→A 15.4% intergenic (+43/‑187) tufB → / → secE translation elongation factor EF‑Tu 2/preprotein translocase membrane subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,177,1710TA15.4% 367.0 / 53.7 147intergenic (+43/‑187)tufB/secEtranslation elongation factor EF‑Tu 2/preprotein translocase membrane subunit
Reads supporting (aligned to +/- strand):  ref base T (53/71);  new base A (8/15);  total (61/86)
Fisher's exact test for biased strand distribution p-value = 6.46e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.57e-01

Only 100 of 158 total aligned reads displayed.

TCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGTATAA  >  NC_000913/4177073‑4177270
                                                                                                  |                                                                                                   
  cGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTg                                                                                                  <  1:2611127/100‑1 (MQ=255)
  cGTGAAGGCGGCCGTACCGTTGGAGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTg                                                                                                  >  2:2845351/1‑100 (MQ=255)
   gTGAAGGCGGCCGTACCGTTGGAGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGCAGCAATGCGCACTACACGGGCATCATTTg                                                                                                  >  2:1882480/1‑99 (MQ=25)
    tGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGAt                                                                                                <  1:2560038/100‑1 (MQ=255)
    tGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGAAAAAGTTCTGAGCTAATTTCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTg                                                                                                  <  1:987325/98‑1 (MQ=255)
     gAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATg                                                                                               <  2:2886835/100‑1 (MQ=255)
        ggcggcCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGccc                                                                                            >  1:2294502/1‑100 (MQ=255)
        ggcggcCGTACCGTTGGAGCGGGGGTTGTAGCAAAAGTTCTGTGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGAATCATTTGATg                                                                                               >  2:387997/1‑97 (MQ=37)
         gcggcCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCt                                                                                           <  1:1362493/100‑1 (MQ=255)
         gcggcCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCt                                                                                           <  1:23721/100‑1 (MQ=255)
         gcggcCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCt                                                                                           <  1:737526/100‑1 (MQ=255)
         gcggcCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCt                                                                                           <  2:2994596/100‑1 (MQ=255)
          cggcCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCtt                                                                                          >  1:1700368/1‑100 (MQ=255)
          cggcCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCtt                                                                                          <  1:3787499/100‑1 (MQ=255)
          cggcCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCtt                                                                                          <  2:2518583/100‑1 (MQ=255)
            gcCGTACCGTTGGCGCGGGCGTTGTATCAAAAGTTCTGTGCTAATTGTTGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCttt                                                                                         <  1:1167992/99‑1 (MQ=37)
            gcCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCtttt                                                                                        <  1:1003872/100‑1 (MQ=255)
            gcCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCtttt                                                                                        >  1:1635753/1‑100 (MQ=255)
             ccGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCttttt                                                                                       <  1:3873896/100‑1 (MQ=255)
             ccGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCttttt                                                                                       <  1:2202891/100‑1 (MQ=255)
             ccGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCtttta                                                                                       <  1:2951751/100‑2 (MQ=255)
              cGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCttttt                                                                                       <  1:377053/99‑1 (MQ=255)
              cGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTg                                                                                      <  1:3117230/100‑1 (MQ=255)
              cGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCttttag                                                                                      <  2:2200896/100‑3 (MQ=255)
              cGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCttttag                                                                                      <  2:1891599/100‑3 (MQ=255)
              cGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCttttag                                                                                      <  1:2960829/100‑3 (MQ=255)
               gTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGACGCCCTTTTTGc                                                                                     >  2:3561440/1‑100 (MQ=255)
               gTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCttttag                                                                                      <  2:1635738/99‑3 (MQ=255)
                 aCCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCttttagtgc                                                                                   <  1:2210180/100‑6 (MQ=38)
                  ccGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACg                                                                                  >  1:1244487/1‑100 (MQ=255)
                  ccGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGAAATACGCACTAAAAGAGCATCATTTGATGCCCTTTTTGCa                                                                                    >  1:364384/1‑98 (MQ=255)
                   cGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGc                                                                                 >  2:3439659/1‑100 (MQ=255)
                    gTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCAc                                                                                   >  2:3212324/1‑97 (MQ=255)
                     ttGTCGCGGGCGTTGTAGCAAAAGTGCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCtt                                                                               <  2:264485/100‑1 (MQ=255)
                       ggCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTc                                                                             >  2:1278859/1‑100 (MQ=255)
                         cgcgGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGt                                                                           <  1:132567/100‑1 (MQ=255)
                          gcgGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCACACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTa                                                                          >  1:1234698/1‑100 (MQ=255)
                             ggCGTTGTAGCAAAAGTTCTGAGCTAAGTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCa                                                                       >  2:3737518/1‑100 (MQ=255)
                                gTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGATGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAg                                                                      <  1:3404326/98‑1 (MQ=255)
                                 ttGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGaaa                                                                   >  2:3517913/1‑99 (MQ=255)
                                   gTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCt                                                                 <  1:3543451/100‑1 (MQ=255)
                                     agtaaaaGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTgg                                                               <  2:240489/97‑1 (MQ=255)
                                      gCAAAAGTTTTGAGTTAATTGCTGATAACATTTGACGCAATGCGTACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGc                                                              <  1:122287/100‑1 (MQ=255)
                                      gCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGc                                                              <  1:1166005/100‑1 (MQ=255)
                                      gCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGc                                                              <  2:665940/100‑1 (MQ=255)
                                       cAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGTGCATCATTTGATGCCCTTTTTTCACGCTTTAGTACCAGAACCTg                                                                <  2:2260031/97‑1 (MQ=255)
                                       cAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCt                                                             >  1:1055515/1‑100 (MQ=255)
                                       cAAAAGTTCTGAGCTAATTGCCAATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCt                                                             >  2:2272502/1‑100 (MQ=255)
                                            gTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCtcatc                                                         <  2:1969206/99‑1 (MQ=255)
                                                 gAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGAt                                                   >  2:2180516/1‑100 (MQ=255)
                                                       aTTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCtt                                             >  1:2934901/1‑100 (MQ=255)
                                                       aTTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCtt                                             <  1:2385323/100‑1 (MQ=255)
                                                         tGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCTCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTg                                           <  2:1090291/100‑1 (MQ=255)
                                                          gCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGt                                          >  2:2317495/1‑100 (MQ=255)
                                                          gCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGACTTTCTTTGt                                          >  2:3836161/1‑100 (MQ=255)
                                                          gCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATACCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGt                                          >  2:2164521/1‑100 (MQ=255)
                                                           ccGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGt                                          >  2:823524/1‑99 (MQ=255)
                                                            cGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCa                                        <  2:1791324/100‑1 (MQ=255)
                                                            cGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCa                                        <  2:3801983/100‑1 (MQ=255)
                                                            cGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGACGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCa                                        <  1:3561479/100‑1 (MQ=255)
                                                             gATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCAt                                       <  1:2164540/100‑1 (MQ=255)
                                                               tAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATaa                                     <  2:484268/100‑1 (MQ=255)
                                                                aaCATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAAt                                    <  1:1554764/100‑1 (MQ=255)
                                                                   aTTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCAt                                 >  1:2316339/1‑100 (MQ=255)
                                                                   aTTTGACGCAATCCGCACTAAAAGGGCATAAATAGATGCCCTTTTTGAACACTTTCGTACAAGAACATGGCTCATCAGTGATTTTCTTTGTCATAATCa                                  >  2:1764812/1‑99 (MQ=255)
                                                                    tttGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCAtt                                <  1:3513210/100‑1 (MQ=255)
                                                                      tGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGc                              <  1:686864/100‑1 (MQ=255)
                                                                      cttccgatctcgcACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGc                              <  1:3767743/90‑1 (MQ=255)
                                                                       gACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCt                             >  1:725882/1‑100 (MQ=255)
                                                                         cGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTga                           <  1:857604/100‑1 (MQ=255)
                                                                                cgtgcaaaaaGGGCATCAAATGATGCCCTTTTTGCACGCTTTCATACCAGAACCTGGATCATCAGTGATTTTTTTTGTCATATCATTGCTGAGAAAgg                     >  2:169441/7‑98 (MQ=21)
                                                                                cgcACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGcagatcggaag                    >  2:3767704/1‑90 (MQ=255)
                                                                                  cACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGctc                  >  2:1594649/1‑100 (MQ=255)
                                                                                  cACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGctc                  <  2:725873/100‑1 (MQ=255)
                                                                                    caaaaaGGGCATCAAATGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTg                >  1:3140490/3‑100 (MQ=255)
                                                                                    caaaaaGGGCATCAAATGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTg                >  1:2720520/3‑100 (MQ=255)
                                                                                    cTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTg                >  1:3474041/1‑100 (MQ=255)
                                                                                    cTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTg                >  2:3687578/1‑100 (MQ=255)
                                                                                      aaaaGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGtt              <  1:2317517/100‑1 (MQ=255)
                                                                                      aaaaGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGtt              >  2:2888924/1‑100 (MQ=255)
                                                                                       aaaGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTg             >  2:355795/1‑100 (MQ=255)
                                                                                       aaaGGGCATCAAATGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTg             >  1:821191/1‑100 (MQ=255)
                                                                                        aaGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGa            <  1:3176381/100‑1 (MQ=255)
                                                                                        aaGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGa            <  2:3470665/100‑1 (MQ=255)
                                                                                         aGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAg           <  2:1402347/100‑1 (MQ=255)
                                                                                          gggCATCATTTGATGCCCTTTTTGCGCGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAgg          >  2:1662737/1‑100 (MQ=255)
                                                                                          gggCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAgg          <  1:3439698/100‑1 (MQ=255)
                                                                                          gggCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAgg          <  1:1890955/100‑1 (MQ=255)
                                                                                           ggCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAggn         <  1:1614426/100‑2 (MQ=255)
                                                                                           ggCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAggg         <  1:3334449/100‑1 (MQ=255)
                                                                                            gCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGc        <  2:3314992/100‑1 (MQ=255)
                                                                                            gCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGc        >  2:2096002/1‑100 (MQ=255)
                                                                                             catcatTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGTCTCTGTTGAGAGc        >  1:1898214/1‑99 (MQ=255)
                                                                                               tcatTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCAGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGta     <  2:2756575/100‑1 (MQ=255)
                                                                                                catTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACGTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGtat    <  2:2631634/100‑1 (MQ=255)
                                                                                                catTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGtat    >  1:3351878/1‑100 (MQ=255)
                                                                                                catTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGtat    <  2:1239177/100‑1 (MQ=255)
                                                                                                 atTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGtata   >  1:926770/1‑100 (MQ=255)
                                                                                                 atTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGtat    <  1:2938392/99‑1 (MQ=255)
                                                                                                  tttGATGCCCTTTATGCACGCTTTCGTACCAGAACCTGGCTTATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGTATaa  <  2:1904534/100‑1 (MQ=255)
                                                                                                  |                                                                                                   
TCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGCTTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGTATAA  >  NC_000913/4177073‑4177270

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: