| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 732,506 | T→C | 17.4% | L975P (CTG→CCG) | rhsC → | Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 732,506 | 0 | T | C | 17.4% | 185.6 / 35.3 | 97 | L975P (CTG→CCG) | rhsC | Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor |
| Reads supporting (aligned to +/- strand): ref base T (42/38); new base C (11/6); total (53/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.28e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.00e-01 | |||||||||||
Only 100 of 103 total aligned reads displayed.
ACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTATGGCGGCG > NC_000913/732407‑732605 | aCGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCt < 1:1365461/100‑1 (MQ=33) cgtcAGTCTGACATAGAAATCCTACCTCATCCCTTAATATGTTATCCGCACGTATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCt < 1:3330740/96‑1 (MQ=11) cGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTg < 2:2784167/100‑1 (MQ=32) cGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTg > 2:1782385/1‑100 (MQ=32) ggCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTgg < 1:2207051/100‑1 (MQ=32) gCAGGCTGACAGAGAAACCCGCCCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCGCCCACCGGTACCATTACGACAGTCAGCACCAGCCGGt < 2:1351606/100‑1 (MQ=11) aGGCTGACAGAGAAAACCGACCTCATCCCGGGAGGGGTTATCCGAACGGATGATGAGCGCACCCACCGGTACCATTACTACTGTCAGCACCGGCTGGTGc < 2:1239351/100‑1 (MQ=11) aGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGc < 1:2363776/100‑1 (MQ=33) ggCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCa > 1:851790/1‑100 (MQ=33) gCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATTATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCAc < 2:3321556/100‑1 (MQ=18) gCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCAc < 1:3389733/100‑1 (MQ=33) gCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCAc > 2:1599915/1‑100 (MQ=32) cTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACt > 2:1770877/1‑100 (MQ=33) cTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACt < 1:85476/100‑1 (MQ=33) cTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACt > 1:598766/1‑100 (MQ=33) cTGACAGAGAAAACCGACCTCATCCCCGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACt < 2:3784481/100‑1 (MQ=17) tGACAGAGAAAACTGACCTCATCCCGGAAGGGGTTATCCGCACGGATGAGGAGCGCACCCACCGGTACGTTTACGACAGTCAGCACCGGCTGGTGCACTa < 2:3423605/100‑1 (MQ=11) tGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTa > 1:3091283/1‑100 (MQ=32) tGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCAGCCGGTGctgac < 2:1769247/100‑5 (MQ=11) tGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCAGCCGGTGctgac < 1:891012/100‑5 (MQ=11) gACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTac > 1:3928669/1‑100 (MQ=32) gACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCAGCCGGTGctgact < 2:3609670/100‑6 (MQ=11) aCAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCTCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCAGCCGGTGctgactg < 1:3157424/100‑7 (MQ=11) aCAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCTCCGGTACCATTACGACAGTCAGCACCAGCCGGTGctgactg < 2:1249446/100‑7 (MQ=11) aCAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTaca < 1:2944829/100‑1 (MQ=32) cAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTacac < 1:1222657/100‑1 (MQ=31) cAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTacac < 2:2251303/100‑1 (MQ=31) cAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTacac < 1:1665732/100‑1 (MQ=31) cAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTacac < 2:3662955/100‑1 (MQ=31) agagAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATAATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACAcg > 1:85686/1‑100 (MQ=11) cGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGt < 1:3742046/99‑1 (MQ=11) cGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTc > 1:2080201/1‑100 (MQ=31) cGCACGGATGATAAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACAAAATATGCAGAGCCGCTGGTCGAAAGTc > 2:1266373/1‑100 (MQ=9) gaCGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCATAGCCGCTGGTCGAAAGTCg < 2:1983791/98‑1 (MQ=17) aCGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGc < 2:2428527/99‑1 (MQ=32) atgatgAGCGCACCCACCGGTACCATTACTACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCt < 1:3425670/100‑1 (MQ=18) atgatgAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCt > 2:3220094/1‑100 (MQ=32) tgatgaGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCtt < 2:1170066/100‑1 (MQ=33) gatgaGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCttt > 1:1498890/1‑100 (MQ=32) gatgaGCGCACACACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCtct > 2:43158/1‑98 (MQ=18) atgaGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGCAACACTATGCAGAGCCGCTGGTCGAAGGTCGCTATGttt > 2:2453726/1‑99 (MQ=11) atgaGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGTTCGAAAGTCGCTATCtt < 2:1408807/98‑1 (MQ=17) atgaGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTa < 1:3193648/100‑1 (MQ=33) atgaGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTa < 1:2051309/100‑1 (MQ=33) tgaGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCCCGGCGAAAGTCGCTATCTTTAc > 2:3425533/1‑100 (MQ=255) gaGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACg < 2:393253/100‑1 (MQ=33) aGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGa > 1:61408/1‑100 (MQ=33) aGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGa > 1:343514/1‑100 (MQ=32) aGCGCACCCACCGGTACCATTACGACAGTCAGCACAGGCTGGTGCACTACACGCGGCCACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGa > 2:1385736/1‑100 (MQ=12) aGCGCACCCACCGGTAACATTACGACAGTCAGCACCGGCTGGTGCACTACACCCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGa > 2:14617/1‑100 (MQ=12) gcgcACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATACAAAACCACTGGTCGAAAGTCGCTATCTTTACGAc > 1:1962829/1‑100 (MQ=11) cgcACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGCCACAATATGCAGAGCCGCTGGCCGAAAGTCGCTATCTTTACGAcc > 2:3468219/1‑100 (MQ=12) cacccaccGGTACCATTACGACAGTCAGCACCGCCTGGTGCACTACACCCGGACACAATATGCACAGCTCCTACGCGAAAGTCGCTATCTTTACGAcc > 2:1457147/1‑98 (MQ=11) acccaccGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGc > 2:3857307/1‑100 (MQ=32) cccaccGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCg > 2:2910973/1‑98 (MQ=32) cccaccGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCt < 2:1197891/100‑1 (MQ=33) ccccGGTACCATTACGACAGTCAGCACAGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTg > 2:2788864/3‑99 (MQ=17) accGGTACCATTACGACAGTCAGCACCGGCTGGTGCATTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTggg < 1:2067729/100‑1 (MQ=17) ccGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGc < 1:86270/100‑1 (MQ=32) ccGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGc < 1:2864314/100‑1 (MQ=33) tACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACAAAATATGCAGAGCCGTTGGTCGAAAGTCGCTATCTTTATGACTCGCTGGGCCGCa < 2:1601488/100‑1 (MQ=11) ccATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAgg > 2:2229181/1‑100 (MQ=33) cATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAggg > 2:3008912/1‑100 (MQ=32) cATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAggg < 1:2053596/100‑1 (MQ=32) ttACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTg < 2:409531/100‑1 (MQ=33) tACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTg > 2:1738316/1‑99 (MQ=32) aCGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGc > 2:3616223/1‑100 (MQ=32) cGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGc > 2:2856794/1‑99 (MQ=33) cGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCa < 1:3439274/100‑1 (MQ=33) cGACAGTCAGCACCGGCTGGTGAACTACACGCGGACACTATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGc < 2:3666535/99‑1 (MQ=12) cGACACTCAGCACCGGCTGGTGCACTACAGTGGGACATAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGc < 2:3915079/99‑1 (MQ=11) cgtgtagtgCACCAGCCGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCaa > 1:1789544/9‑100 (MQ=11) gtgtagtgCACCAGCCGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACACGCTGGGCCGCAGGGTGGCaaa > 1:830515/8‑100 (MQ=11) aCAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTAGCTATCTTTACGACAAGCTAGGCCACAGGGTGGCaaa > 1:1894112/1‑100 (MQ=11) tgtagtgCACCAGCCGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCaaaa > 2:1012741/7‑100 (MQ=11) cAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCaaaa > 1:2924075/1‑100 (MQ=33) gtagtgCACCAGCCGGTGCACTACACGCGGAAACAATATGCAGAGACGCTGGTCGAAAGTCGCGATCTTAACGACACGCTGGGCCGCAGGGGGGCAAAAc > 2:786942/6‑100 (MQ=11) gtagtgCACCAGCCGGTGCACTAAAAGAGGACACAATATGCAGAGACGATGGTAGAAAGTCGCTATCTTTACGAAACGCTGGGCCGGAGGGTGGCaa > 2:728097/6‑97 (MQ=2) aGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAAc < 1:292898/100‑1 (MQ=32) tagtgCACCAGCCGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACg > 1:1963115/5‑100 (MQ=11) tagtgCACCAGCCGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAAGGTGGCAAAAc > 1:2681838/5‑99 (MQ=11) gTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACg > 2:2905514/1‑100 (MQ=32) agtgCACCAGCCGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACgg > 2:1020391/4‑100 (MQ=255) agtgCACCAGCCGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACgg > 2:509615/4‑100 (MQ=255) agtgCACCAGCCGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACgg > 1:2335715/4‑100 (MQ=255) agtgCACCAGCCGGTGCACTACACGCAGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGAACCGCTGGGCCGCAGGGTGGCAAAACg > 1:2375987/4‑99 (MQ=11) cAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACggg > 2:3573219/1‑100 (MQ=32) aGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGt < 2:2071268/100‑1 (MQ=33) gCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACggg > 2:3923891/1‑98 (MQ=32) gCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTa > 2:2087615/1‑100 (MQ=35) cACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTAt > 2:3138257/1‑100 (MQ=35) aCCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTATg < 1:2802687/100‑1 (MQ=35) ccGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTATgg > 1:1092849/1‑100 (MQ=35) ccGGCTGGTGCACTACACACGTACACAATATACAGAGCCGCTAGTCGAAAGTCGCTATCTTTAGGCCCAGCCGGGCCGCAGGGTGGCCAAAGGGGTATg > 2:1825461/1‑99 (MQ=11) gCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTATggcgg < 1:3864232/100‑1 (MQ=38) gCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGAACCGCTGGGCCGCAGGGTGGCAAAACGGGTATggcgg > 1:1439960/1‑100 (MQ=25) tGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTATGgcggcg < 2:3018422/100‑1 (MQ=35) tGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTATGgcggcg > 1:3640021/1‑100 (MQ=38) tGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTATGgcggcg < 2:143769/100‑1 (MQ=38) tGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTAGGCCGCAGGGTGGCAAAACGGGTATgacgg > 2:3491810/1‑98 (MQ=255) | ACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTATGGCGGCG > NC_000913/732407‑732605 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |